Rnf125 (ring finger protein 125) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Rnf125 (ring finger protein 125) Rattus norvegicus
Analyze
Symbol: Rnf125
Name: ring finger protein 125
RGD ID: 1306757
Description: Predicted to enable several functions, including p53 binding activity; ubiquitin conjugating enzyme binding activity; and zinc ion binding activity. Predicted to be involved in several processes, including negative regulation of RIG-I signaling pathway; negative regulation of type I interferon production; and protein polyubiquitination. Predicted to act upstream of or within cellular response to leukemia inhibitory factor. Predicted to be located in Golgi membrane. Predicted to be part of VCP-NPL4-UFD1 AAA ATPase complex. Orthologous to human RNF125 (ring finger protein 125); PARTICIPATES IN Retinoic acid-inducible gene (RIG) I-like receptor signaling pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: E3 ubiquitin-protein ligase RNF125; LOC361296; ring finger protein 125, E3 ubiquitin protein ligase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81812,528,995 - 12,550,646 (+)NCBIGRCr8
mRatBN7.21812,254,066 - 12,275,719 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1812,253,852 - 12,275,983 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1812,444,325 - 12,465,962 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01813,231,979 - 13,253,612 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01812,503,627 - 12,525,258 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01815,193,226 - 15,225,454 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1815,192,962 - 15,225,427 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01814,972,530 - 15,004,384 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41812,726,187 - 12,747,639 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11812,738,496 - 12,774,725 (+)NCBI
Celera1812,252,978 - 12,274,631 (+)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (EXP)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
amphetamine  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
buspirone  (EXP)
cadmium dichloride  (ISO)
captan  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
cobalt dichloride  (EXP)
Cuprizon  (EXP)
cyclosporin A  (ISO)
decabromodiphenyl ether  (EXP)
dibenz[a,h]anthracene  (ISO)
dorsomorphin  (ISO)
epoxiconazole  (ISO)
fenofibrate  (ISO)
fluoranthene  (ISO)
flutamide  (EXP)
folpet  (ISO)
furan  (EXP)
gadodiamide hydrate  (ISO)
genistein  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
hydrogen cyanide  (ISO)
indole-3-methanol  (EXP)
lipopolysaccharide  (ISO)
MeIQx  (ISO)
mercury dibromide  (ISO)
methapyrilene  (EXP)
methimazole  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
N-acetyl-L-cysteine  (EXP)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
O-methyleugenol  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (ISO)
parathion  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
potassium cyanide  (ISO)
progesterone  (ISO)
rotenone  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tetrachloromethane  (EXP,ISO)
triclosan  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:17460044   PMID:17990982   PMID:20439489   PMID:25591766   PMID:26471729   PMID:27411375   PMID:28036111   PMID:37951197  


Genomics

Comparative Map Data
Rnf125
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81812,528,995 - 12,550,646 (+)NCBIGRCr8
mRatBN7.21812,254,066 - 12,275,719 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1812,253,852 - 12,275,983 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1812,444,325 - 12,465,962 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01813,231,979 - 13,253,612 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01812,503,627 - 12,525,258 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01815,193,226 - 15,225,454 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1815,192,962 - 15,225,427 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01814,972,530 - 15,004,384 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41812,726,187 - 12,747,639 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11812,738,496 - 12,774,725 (+)NCBI
Celera1812,252,978 - 12,274,631 (+)NCBICelera
Cytogenetic Map18p12NCBI
RNF125
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381832,018,825 - 32,088,144 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1832,018,825 - 32,073,219 (+)EnsemblGRCh38hg38GRCh38
GRCh371829,598,788 - 29,653,182 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361827,852,443 - 27,907,152 (+)NCBINCBI36Build 36hg18NCBI36
Build 341827,852,442 - 27,903,161NCBI
Celera1826,404,874 - 26,460,130 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
HuRef1826,455,131 - 26,510,081 (+)NCBIHuRef
CHM1_11829,525,999 - 29,580,720 (+)NCBICHM1_1
T2T-CHM13v2.01832,209,216 - 32,280,737 (+)NCBIT2T-CHM13v2.0
Rnf125
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391821,077,672 - 21,120,416 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1821,077,682 - 21,116,919 (+)EnsemblGRCm39 Ensembl
GRCm381820,944,615 - 20,987,359 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1820,944,625 - 20,983,862 (+)EnsemblGRCm38mm10GRCm38
MGSCv371821,103,126 - 21,142,349 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361821,087,635 - 21,126,858 (+)NCBIMGSCv36mm8
Celera1821,440,322 - 21,479,523 (+)NCBICelera
Cytogenetic Map18A2NCBI
Rnf125
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540219,295,809 - 19,309,987 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540219,276,157 - 19,310,605 (+)NCBIChiLan1.0ChiLan1.0
RNF125
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21749,395,711 - 49,450,141 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11835,088,307 - 35,159,003 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01825,227,353 - 25,297,186 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11828,823,807 - 28,873,667 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1828,824,183 - 28,873,068 (+)Ensemblpanpan1.1panPan2
RNF125
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1757,570,779 - 57,607,485 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl757,574,738 - 57,608,017 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha757,004,743 - 57,041,487 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0757,552,615 - 57,589,372 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl757,552,619 - 57,589,286 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1757,229,577 - 57,266,076 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0757,248,867 - 57,285,615 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0757,544,766 - 57,581,517 (-)NCBIUU_Cfam_GSD_1.0
Rnf125
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494453,226,460 - 53,267,389 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366821,231,823 - 1,268,657 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366821,228,903 - 1,268,651 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNF125
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6115,857,721 - 115,903,677 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16115,857,697 - 115,905,550 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26108,515,308 - 108,583,425 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RNF125
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11848,665,694 - 48,712,371 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1848,666,554 - 48,711,604 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605023,218,377 - 23,265,573 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnf125
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624770909,808 - 942,386 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rnf125
80 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:64
Count of miRNA genes:59
Interacting mature miRNAs:64
Transcripts:ENSRNOT00000021136
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor surface area measurement (CMO:0002078)18224947722066430Rat
1641910Colcr3Colorectal carcinoma resistance QTL 35.020.000007intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)18224947722066430Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
12904690Cm129Cardiac mass QTL 1290.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)181194427326548295Rat
12904689Cm128Cardiac mass QTL 1280.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)181194427326548295Rat
12904693Am20Aortic mass QTL 200.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)181194427326548295Rat
12904695Kidm73Kidney mass QTL 730.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)181194427326548295Rat
12904691Cm130Cardiac mass QTL 1300.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)181194427326548295Rat
12904680Bw189Body weight QTL 1890.019body mass (VT:0001259)body weight (CMO:0000012)181194427326548295Rat
2301410Bp317Blood pressure QTL 3170.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194427326548295Rat
1331781Scl28Serum cholesterol level QTL 283.995blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)181194429924797117Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat

Markers in Region
D18Got15  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21812,242,712 - 12,242,990 (-)MAPPERmRatBN7.2
Rnor_6.01815,236,381 - 15,236,658NCBIRnor6.0
Rnor_5.01815,015,311 - 15,015,588UniSTSRnor5.0
RGSC_v3.41812,714,833 - 12,715,111RGDRGSC3.4
RGSC_v3.41812,714,834 - 12,715,111UniSTSRGSC3.4
RGSC_v3.11812,741,480 - 12,741,757RGD
Celera1812,241,625 - 12,241,902UniSTS
RH 3.4 Map18116.9UniSTS
RH 3.4 Map18116.9RGD
RH 2.0 Map18764.3RGD
Cytogenetic Map18p12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 33 25 8 25 15 11
Low 3 43 24 16 11 16 8 10 68 35 26 8
Below cutoff 1 6

Sequence


RefSeq Acc Id: ENSRNOT00000090853   ⟹   ENSRNOP00000070451
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1812,254,093 - 12,275,983 (+)Ensembl
Rnor_6.0 Ensembl1815,192,962 - 15,225,427 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000095469   ⟹   ENSRNOP00000082609
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1812,253,852 - 12,273,758 (+)Ensembl
RefSeq Acc Id: NM_001108424   ⟹   NP_001101894
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81812,528,995 - 12,550,646 (+)NCBI
mRatBN7.21812,254,066 - 12,275,719 (+)NCBI
Rnor_6.01815,193,226 - 15,225,454 (-)NCBI
Rnor_5.01814,972,530 - 15,004,384 (-)NCBI
RGSC_v3.41812,726,187 - 12,747,639 (+)RGD
Celera1812,252,978 - 12,274,631 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001101894 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI62061 (Get FASTA)   NCBI Sequence Viewer  
  EDL76100 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000070451
  ENSRNOP00000070451.2
  ENSRNOP00000082609.1
RefSeq Acc Id: NP_001101894   ⟸   NM_001108424
- UniProtKB: B1WCA3 (UniProtKB/TrEMBL),   A0A0G2JXY7 (UniProtKB/TrEMBL),   A0A9K3Y7V2 (UniProtKB/TrEMBL),   A0A8I5ZUW9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000070451   ⟸   ENSRNOT00000090853
RefSeq Acc Id: ENSRNOP00000082609   ⟸   ENSRNOT00000095469
Protein Domains
C2HC RNF-type   RING-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JXY7-F1-model_v2 AlphaFold A0A0G2JXY7 1-233 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306757 AgrOrtholog
BioCyc Gene G2FUF-8206 BioCyc
Ensembl Genes ENSRNOG00000057832 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000090853 ENTREZGENE
  ENSRNOT00000090853.2 UniProtKB/TrEMBL
  ENSRNOT00000095469.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7115974 IMAGE-MGC_LOAD
InterPro Di19_Zn_binding UniProtKB/TrEMBL
  ZF_C2HC_RNF UniProtKB/TrEMBL
  Znf-RING_euk UniProtKB/TrEMBL
  Znf_RING UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
  Znf_RING_CS UniProtKB/TrEMBL
KEGG Report rno:361296 UniProtKB/TrEMBL
MGC_CLONE MGC:188062 IMAGE-MGC_LOAD
NCBI Gene 361296 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF125 UniProtKB/TrEMBL
  ZINC FINGER, RING/FYVE/PHD-TYPE UniProtKB/TrEMBL
Pfam zf-Di19 UniProtKB/TrEMBL
  zf-RING_UBOX UniProtKB/TrEMBL
  zf_C2HC_14 UniProtKB/TrEMBL
PhenoGen Rnf125 PhenoGen
PROSITE ZF_C2HC_RNF UniProtKB/TrEMBL
  ZF_RING_1 UniProtKB/TrEMBL
  ZF_RING_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000057832 RatGTEx
SMART RING UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
UniProt A0A0G2JXY7 ENTREZGENE
  A0A8I5ZUW9 ENTREZGENE, UniProtKB/TrEMBL
  A0A9K3Y7V2 ENTREZGENE, UniProtKB/TrEMBL
  B1WCA3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A0G2JXY7 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-15 Rnf125  ring finger protein 125  Rnf125  ring finger protein 125, E3 ubiquitin protein ligase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-07-14 Rnf125  ring finger protein 125, E3 ubiquitin protein ligase  Rnf125  ring finger protein 125  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Rnf125  ring finger protein 125   Rnf125_predicted  ring finger protein 125 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Rnf125_predicted  ring finger protein 125 (predicted)      Symbol and Name status set to approved 70820 APPROVED