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Gene: Kiaa1671 (KIAA1671 homolog) Rattus norvegicus

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Symbol:

Kiaa1671

Name:

KIAA1671 homolog

RGD ID:

1306556

Description:

Predicted to be located in cilium; intercellular bridge; and microtubule cytoskeleton. Orthologous to human KIAA1671 (KIAA1671); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; atrazine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

KIAA1671 ortholog; LOC288744; RGD1306556; RGD1560125; similar to hypothetical protein A530094D01; uncharacterized protein KIAA1671 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KIAA1671 (KIAA1671)	HGNC	HomoloGene, Panther
Mus musculus (house mouse):	2900026A02Rik (RIKEN cDNA 2900026A02 gene)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Kiaa1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KIAA1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KIAA1671 (KIAA1671)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Kiaa1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KIAA1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KIAA1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Kiaa1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Kiaa1671 (KIAA1671 ortholog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FRY (FRY microtubule binding protein)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	2900026A02Rik (RIKEN cDNA 2900026A02 gene)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PhylomeDB)
Homo sapiens (human):	KIAA1671	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch73-138n13.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	si:ch73-138n13.1	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Danio rerio (zebrafish):	tnks1bp1 (tankyrase 1 binding protein 1)	Alliance	DIOPT (Hieranoid\|InParanoid\|PANTHER)
Danio rerio (zebrafish):	tnks1bp1 (tankyrase 1 binding protein 1)	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	kiaa1671	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	49,069,929 - 49,212,604 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	49,069,940 - 49,212,604 (+)	Ensembl				GRCr8
mRatBN7.2	12	43,409,479 - 43,552,152 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	43,411,069 - 43,552,157 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	44,575,688 - 44,718,687 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	45,188,707 - 45,331,370 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	44,249,235 - 44,391,897 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	49,418,026 - 49,561,038 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	49,419,582 - 49,561,038 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	51,192,341 - 51,333,677 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	44,451,049 - 44,559,584 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
RGSC_v3.4	12	44,451,049 - 44,472,941 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	45,005,990 - 45,147,926 (+)	NCBI		Celera
RGSC_v3.1	12	44,343,744 - 44,423,316 (+)	NCBI
Cytogenetic Map	12	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,6-dimethoxyphenol (ISO)

acrolein (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-pinene (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (ISO)

butanal (ISO)

C60 fullerene (EXP)

cadmium dichloride (ISO)

caffeine (ISO)

calcitriol (ISO)

coumarin (ISO)

Cuprizon (EXP)

cytarabine (ISO)

dicrotophos (ISO)

dimethyl sulfoxide (ISO)

dorsomorphin (ISO)

FR900359 (ISO)

fulvestrant (ISO)

furfural (ISO)

indole-3-methanol (EXP)

lipopolysaccharide (ISO)

manganese(II) chloride (EXP)

methapyrilene (ISO)

methoxychlor (EXP)

ozone (ISO)

paracetamol (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

sunitinib (ISO)

temozolomide (ISO)

tetrachloromethane (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cilium (IEA,ISO)

intercellular bridge (IEA,ISO)

microtubule cytoskeleton (IEA,ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15632090

Genomics

Comparative Map Data

Kiaa1671
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	49,069,929 - 49,212,604 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	49,069,940 - 49,212,604 (+)	Ensembl				GRCr8
mRatBN7.2	12	43,409,479 - 43,552,152 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	43,411,069 - 43,552,157 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	44,575,688 - 44,718,687 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	45,188,707 - 45,331,370 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	44,249,235 - 44,391,897 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	49,418,026 - 49,561,038 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	49,419,582 - 49,561,038 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	51,192,341 - 51,333,677 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	44,451,049 - 44,559,584 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
RGSC_v3.4	12	44,451,049 - 44,472,941 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	45,005,990 - 45,147,926 (+)	NCBI		Celera
RGSC_v3.1	12	44,343,744 - 44,423,316 (+)	NCBI
Cytogenetic Map	12	q16	NCBI

KIAA1671
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	24,952,716 - 25,197,448 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	24,952,711 - 25,197,448 (+)	Ensembl			hg38	GRCh38
GRCh37	22	25,348,683 - 25,593,415 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	23,740,407 - 23,916,747 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	22	9,228,329 - 9,397,741 (+)	NCBI		Celera
Cytogenetic Map	22	q11.23	NCBI
HuRef	22	8,371,744 - 8,541,096 (+)	NCBI		HuRef
CHM1_1	22	25,382,674 - 25,552,037 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	25,414,302 - 25,658,633 (+)	NCBI		T2T-CHM13v2.0

2900026A02Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	113,234,189 - 113,369,158 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	113,234,189 - 113,369,102 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	113,086,323 - 113,221,292 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	113,086,323 - 113,221,236 (-)	Ensembl			mm10	GRCm38
MGSCv37	5	113,515,343 - 113,592,333 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	113,329,253 - 113,403,594 (-)	NCBI		MGSCv36	mm8
Celera	5	110,206,250 - 110,283,659 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	55.38	NCBI

Kiaa1671
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	61,151 - 180,913 (-)	Ensembl
ChiLan1.0	NW_004955455	53,731 - 193,113 (-)	NCBI	ChiLan1.0	ChiLan1.0

KIAA1671
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	34,851,016 - 35,096,484 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	37,549,681 - 37,794,945 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	5,907,062 - 6,152,632 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	23,633,734 - 23,817,378 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	23,648,362 - 23,817,378 (+)	Ensembl			panPan2	panpan1.1

KIAA1671
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	19,124,243 - 19,282,890 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	19,139,288 - 19,276,144 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	18,946,901 - 19,148,582 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	19,446,257 - 19,648,179 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	19,502,111 - 19,644,771 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	19,151,682 - 19,353,472 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	19,417,379 - 19,619,233 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	19,486,626 - 19,688,559 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Kiaa1671
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	115,572,786 - 115,712,372 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936657	198,513 - 297,949 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936657	198,497 - 297,919 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KIAA1671
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	14	42,987,547 - 43,189,763 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	45,771,027 - 45,899,868 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KIAA1671
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	8,048,629 - 8,291,211 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	8,121,422 - 8,288,920 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666045	118,239,832 - 118,496,872 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kiaa1671
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	1,903,902 - 2,087,295 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624747	1,896,469 - 2,087,323 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Kiaa1671
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	16	40,752,979 - 40,901,628 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	90
Count of miRNA genes:	79
Interacting mature miRNAs:	82
Transcripts:	ENSRNOT00000000901
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	24805022	52308831	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
8693635	Alc28	Alcohol consumption QTL 28	2.7	0.439	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	12	28717718	50386405	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	25989355	52308831	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	18473041	52308831	Rat
1300162	Bp188	Blood pressure QTL 188	3.19		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	37764145	51558799	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	15264248	52308831	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
1300175	Cm5	Cardiac mass QTL 5	3.78		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	33700432	51558799	Rat
1331786	Kidm11	Kidney mass QTL 11	3.571		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	12	16187438	52308831	Rat
8693658	Alc33	Alcohol consumption QTL 33	2.1	0.68	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	12	28717718	49212240	Rat
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	16135029	52308831	Rat
1331761	Bp218	Blood pressure QTL 218	2.973		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	16187438	51213550	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	18473041	52308831	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	16135029	52308831	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
631543	Bp83	Blood pressure QTL 83	5.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	44139558	52308831	Rat

Markers in Region

D12Wox23

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	43,470,440 - 43,470,670 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	49,479,175 - 49,479,404	NCBI	Rnor6.0
Rnor_5.0	12	51,253,273 - 51,253,502	UniSTS	Rnor5.0
RGSC_v3.4	12	44,479,374 - 44,479,603	UniSTS	RGSC3.4
Celera	12	45,066,876 - 45,067,105	UniSTS
Cytogenetic Map	12	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	88	59	6	352	188	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001402472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006221387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006221388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017604511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000082998 ⟹ ENSRNOP00000070952

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,069,940 - 49,212,604 (+)	Ensembl
mRatBN7.2 Ensembl	12	43,411,069 - 43,552,157 (+)	Ensembl
Rnor_6.0 Ensembl	12	49,419,582 - 49,561,038 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095507 ⟹ ENSRNOP00000094014

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,131,523 - 49,212,604 (+)	Ensembl
mRatBN7.2 Ensembl	12	43,471,125 - 43,552,157 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119382 ⟹ ENSRNOP00000097170

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,157,032 - 49,212,602 (+)	Ensembl
mRatBN7.2 Ensembl	12	43,495,983 - 43,552,157 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122557 ⟹ ENSRNOP00000109826

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,112,974 - 49,212,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000135667 ⟹ ENSRNOP00000101530

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,150,480 - 49,212,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000139251 ⟹ ENSRNOP00000108133

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,153,430 - 49,212,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167668 ⟹ ENSRNOP00000109818

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,166,307 - 49,212,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000168511 ⟹ ENSRNOP00000102344

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	49,069,940 - 49,212,604 (+)	Ensembl

RefSeq Acc Id:

NM_001402472 ⟹ NP_001389401

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,069,940 - 49,212,604 (+)	NCBI
mRatBN7.2	12	43,409,479 - 43,552,152 (+)	NCBI

RefSeq Acc Id:

XM_006249575 ⟹ XP_006249637

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,157,018 - 49,212,604 (+)	NCBI
mRatBN7.2	12	43,496,335 - 43,552,152 (+)	NCBI
Rnor_6.0	12	49,504,255 - 49,561,037 (+)	NCBI
Rnor_5.0	12	51,192,341 - 51,333,677 (+)	NCBI

Sequence:

show sequence

TTCACCTGCAGAAGGAACCACCGAGAACGGGGTATAGATCCTGGGGAGGCCGGAAGGTCCAGAA
TCCCACTGCGCTGATGCCCCTCCCTGTCCAGCGTGCACCCTCTTCTCTTATCACGCCAGCCTCC
GCAAGCTCCAGCCCTTAAGGGTTAAACACAGTGAGCTCATGTGATCCCTGTGCACATGAATCAT
CCTCACTGCTCCTTGTGCCCAGCCTAGGGAAGGGGCAGATGCTGTGCCCCCAGGTTGCCATGGT
AACCCTGCTCCTACCAAAACTGCAGGCACCTCAGCCCCAGACTCACTCATGAGGGAAGCTCAGG
GCAGGTCACCTGCATCTTCCATCCTCCAGGAGAGACAGCAGGGACTGCTGAGTGGATAAGAGGG
AGAAGGAGCTGGTTGGGGGAGGCTTGGCCTGGAGCTCGGCAGGGAGAGGAAGCTGAAGGGCGCT
GCCGCTGCCGGGAGAGGGAGGCAGACTGACAGCCAGCCACAGGTCCTCAGACTCCACCTGAAGC
CCCGGAGGCTGGAGCGGCAAGAGTCCCTCCACCTCCCAGGGGCAGCCGCACCTCCCACGCACAT
GCCCCCACACGCGCGTTGAGCACTCCAGTTCGCACTCACCCGCACGCCCGGCAGCCGCGTTTCT
GCACAGTGCTGCCTAGGGTGGGTAGGCAGTCTGGCACAAGAAGTCCCTGAGGGACAGCGAGCGA
GTTGAGACTTAGGGGGGGAAAAAAACTGGGGCTGACGCCAGCTCCCTGGGCGGCTACCTCCTGA
GGCCCCTCCTGCATTCCTGGGCTGCGCGCCCCTCGCCAAGACAGGGGGCTGATGTCATTCCGGG
CTGCCGGGCCAGGGGACCCGGGCTGGGTGGCTGCCTCTCCGGAAGTGAGCGCGCTGCCTGCTGG
CCGGCAGGTTCGGCTTTGGGTTTGGAGTCTCCAGCCTGAGGACTGGAGATCTGCCTGGATCAGG
TGAGAAGAGCCTGGAGGGAGAGGGGGACGGCGGTGGGCGGTGGCTCCCAGGTGCGCATGGGAGT
TCTCTCTGCATGGACGGAAGTGAGTTCGGGGTGCCAGCCCCCTCGCCCAGCTCCTCGCAACCAC
CTGCTTCTTGAGTTCATCAGGGTTGGCCCTGGGGACTAGAACTGGACGTCCTGGTTGGTTGACT
CGAGGCTCCTGCTGGTGACCCCCTGCTGACCCGTCACCGTCCCTGTTTTGTGACCCTCGGATGC
CTGTCGGGCGATGTTTACTTTACTTGAGCTGATGCGCTCAGCCGGGCTTTACATCGGAGCCCAG
AACTTCTTCTACCTAAGGACGGTCACCGACAGAAGGACCAGGACCCTGGCAGTGCTGGCCTCCT
AACTGCCTCCGCCTGCCCCCTCCTCCAGGCTGGCCCCATGGATTACCTGGGTGACAAGCTTTCG
GTGGCCCAGACACACATGACTCAGTGGGTTGGCACGGTGAGGCGGTCCTTCCAAGAGGCGCTGC
ACTTGGTGACGGCCACGGTGGGCACCGAGCGTAGCGGGGAGTCCGCCGGTCGCACCCCGTTCAA
GCGCACCTCCTCCTTCAGACACCTGGCCTCTCGGAGCCGAGAGTCCTTCCGCCGCTTCTCCGCA
CGCAGCCAGCAGAGGTTCTCGTCCCTCAGGAAGAGACAGCCGGACTCCGAGGCCCCTGATCTTA
ACCAGCTGAAGCAGTGTTTCTCCCGGCGGGCACCCGAGGCCAAGGACACTGACACCCTCGTGCA
GGAAGCCGACAGCCAGTATGGGACCTGGGCAGCCCAGCACCAGAACGGGGGCAGTTTTGGCCCG
GAGACTCCTTCTCCTGACAGCAGTGCTGCGTCTGCGGGAAAGCAGCCTCCAGGCAGTCACTTGT
CCTCGTACACCGAGTCCACGTCGGTGGAGCAACATGACAGCTCCAGGGATCGGCGCAGCTCCAG
CGTGGACCGCTCCAGTTCTGAGCTGGAGTCCACAGATGGCCCAGAGGGACCACCTCCGTCAGAC
GTCTGTCCTGCAGAGGGAGAGGATGATTTCTCCTTCATCCATCAAACCTCAGTCCTTGACTCCA
GTGCCCTTAAGACCCGGGTGCAGCTGAGTAAGCGAAGCCGTCGCCGGGCGCCCATCTCCCACTC
GCTCCGGCGCAGCCAGTTCAGCGAGTCTGAGAGCCGGTCCCCTCTGGAAGAGGAGTCACACAGC
GCGTGGATGTTCAAGGACTCCACAGAAGAGAAGTCACCCAGGAGGGATGAATCCGATGAAGAGC
CTCCCAGGGTGGAGAGGACCCCTGTTGGCCACCCTCAGAGGATGCCTGTGTTTCCAGGCATGGA
CCCAGCTGTGCTGAAGGCTCAGCTGCCCAAGAGATCAGAAGTGGACAGTCCTGGAGAGTCTCTA
AGCTGGACACCCCAGCCCAAGACCCCTAAGTCGCCCTTCCAGCCTGGGGTGCTGGGCAGTCGGG
TGCTGCCTTCCAGTGCAGAGAGAGAGGAGAGGTCTGAGGAGCGCTCACCCCAGTGGCTAAAGGA
ACTGAAATCCAAGAAGAGGCAGAGCCTGTATGAGAATCAAGCTTGACCGGACAGAAGATCACTA
TACCCACAAACTCAAGCCTTAACCGCCAGACGTCTGAGGCCAAGACACCCACTCTCCCTGACCA
CGCTCACGTGCCTGGGCCTCTCCACCCTGAGGACGCCGTGCTGAGCCCCACCCGGGTCCCCTCG
GGAAGACCCTGTCCCGGGACTCGCTCCAGTCCACAGAGAGATCTTTCAGCTCTCCTTCAAGAAG
TGTCCAGGCCCGTGGATTGGCCTTTGGTGTGACAGTTGGCCTTCCTGCTCTCTGCGGACACCTC
GCCGGGCTCCCTAGGCTGGGGGTTCCACCTGGGCTCCGCCCCTGGCAGCCTTTCAGGAAGGACC
CTGGCAAGAAAGCCTGAATGACTCTTGGGTGGCAAAGGTCACCATCCAAGCGTTACACCGGTGT
CTCCCGGGTTGGGTTTGATTTTTTTTTTTTTACACCCCCCTTCCTGACAAGCTCTTCTTCCCCA
CTAACTGCCTTCATTCTGATTTATAAGCACAGCCCAGCCCCATCTTGTCTGTATCCTTTTCCTT
CCTGTGAGGCCCTGGGCACAGTTGTCCTGGGTCTCGACACTCTCCTGTTTGCTTTAGAGGAGGA
TAAAGCAATAATGCGGCCAGTTTCCCCTGAACCTTGACATGTGCTTGGGTCTCTGCATTGACAG
CGGAAAGGGTTGGGGGGCAGACAGTGACCGTTGCCTCCTGTCACCTGACCTCGCTGTCCAAGCC
TACGAAAGCTTGTGACTTTCACCTTTGTCCACATCTGGGATGCTCTGATCTCCATGGGGGCAGC
CTTTGCCCCCAGTTCTCAAGCATTACGAACCTCTGTTGGAATTGTCCGTACCCCGGCCGCTCAC
ATCCCGGACCTGTGCTTTCTGAACACCCATATCCTGCTGGAGAGAAGACTCAACCAAGTCAGCT
TGGAACAGACGTGGCCCTGACCCTGCCCTCCATGACCTACCCACCTGGCTAAGTGGTCGTCAAG
GCCCATGTGGATGTTGCTCTAACTGAAAGGCCCCTGTAGTGGGAGCCCCAGGCCAGATGCTGGG
CCGTGAGGTCTACGATGTCCGATGTCCTGCGTTGTGCTACCTGCATGCTCGCTCCTGGGAGTCT
CGGAGCCTCTGTACTCCTGACGCCTACTCTGTCTTGTTTCCTTTTAAGCCTTCAAGGTGACATC
AGGAGCCCCTGGCCCCAGGGGTCACCCCAGACTCACCAGGCCAACTGCCTGCAGCATGCTGGCA
GCTTCCAGAGACCTTTTACCAACCTTGCCTTGGTGACATGCTTGGTAGTTCCAAGGCGGTCTGT
GGCTGTGGAGGGCCCTGGGCCAGGTGTTCTGACGGATGTCTGCCTGGCTCGTGTGCCCAGCCAT
TGCTGCCCCGACGTTCTCGGAGACAGAGTCTCTTGCTTCTGCTCCCTCTCTGCCTGGGTTCCCT
TTGGAAGGGTTTGGTGGGAATGGATGGCCGAGCTTGGTGTCTTAGGACAGTCACCTGTGCCTGC
GGACTGAGGTGTTCAGCACCGAGGAGACTGCAGGCCCCACCTGCACCCCTCCCTGAGCTACTAG
TGAGCGGGCACACGCCTCTGAAATCACTTGGGGTTCAGTCTCCCTGCAGATGCTCCCGTAGTCC
CTGTTTCCTGTTCTGTTTTGTTTTTTAGAATCCATTTTGTATCCTGTGGCGATTTTGACCCAGT
AGCTTGCCAGGGACTTTTTTTCAAACACACTACAGGGTTGAGGGTATAGCTCAGTGGGCAGAGT
ATGTATCTAACGCAGAGGACCAGAGTTCTGTCCAGGGACCACATAAATGAGGTGTGGCGGTGCA
CATCTGTGATTCTAGTGCCTGGCAGATGGGGGGGGGGAGGAGGAGGAGGAAGAGGAGGAAGAAG
AGGCTCAGAAGTTTAAGGATATCCTTGGCTATATAAGAAAGCTGCAGATCAGCCTGGGCTAGAA
AACACTTGAATAGAACAAAGCAAAGCAACATTCTGCTCGTGATTTTCGTCTTAACCTGTCTTGA
CTCCCTTCTCCTGGGGAGTAGGAGCCTAGGGTAAATTAAGACCATGGCAGTAGGAGTCGATCCC
ATCTTAACTATCACAGTAGTTAAGGCACAGTAGAATCAAAACGTGCTTGCCCTGTCTGTCATTG
CCTAACCCCTCACACCTGATGAGAAATCAACTTGATTCCTCACGAAGACCCACATAAGGACCTC
GGCTCTGACCAGGGCAGGTTTCTACATCTCCCCCCAAGGAACCCAAGATCTGACAATCTCACTA
GGTCTGCAGTGACCTGCGTTGGCTGTGTCCCCCTATTTAGAGTCAGTGCAGCACAGCGAGCAGA
GGCCCATGCTTGGATCCTTAGCTGAGCTGAGCGAGTGGCTCACTTAGTCCCCTTTTTAAAACCA
GGTGAGGCTCTGGGGCCAAGTCATGGGCCGTATGCCTCCCCATGACCCTCCTTTTAAAGGAACC
TAATAATGCCTTAATCGTGTGTGATAGGCACCTGTGTCCCCCTCCCCCAACCCTCCCTCCTGGT
GACTGGATGTTTGCAGAGTCTCACATACGCCTCCATCTTCTCTATGCCCATCAGCATTTTGACA
TCTGACCTTTGGGTACGCCCCTCCCACCCAGTAGATAGGCATTCTCCTGCATAGTCTGTGGCCT
CATACACGGAGGCCTTTGCCCTGCGAAATGGCGTGGCAGGATGCTCTCGGGCATCCTCAGCTCC
AATGGAGAAACTGGGTGGTCCTGGGGAGTAGGAGCCTAGTGTAAAAATTATCTCACGCCCCCCG
GGTTGGACTCAGGGGCAGACGGGATCAGAGGAGTTTATAGGGTAGGGGAGCAGGCAAAAGGTTC
CATCAGATGCCTATTTTCCTTCTACAATACTGCCCCCTGCAGGAAGCAGCTGTTAAAGCAAAGT
CATCAATTTAGCTGCTGAGCAGGGATTGGAAAAAACACTCCTGTGATTTCCAAAGGAAACGCAG
CGAGTCCTGGTGCGTGTATGTTGGGGGGGCGTGGGGGTAAGGACTGCTGTCAATCCTGGCTTTA
CAGCCACTCATTCTGGATCTAGGCTTGACTGAAAAGTGGAAAGCCACCCACCTCTTAATATCCA
GCCCTGGCGAATCATTTGGGCGACAGAGACGCTGTGCCCTCCAAATGTGCCTTTGCCCTGTCGA
CAGGAAACGGATCTCCAAATACCCAGGTTCCCCACATTGCTGGGGACTAGCAGGATCCACTCAG
CATCTCTGAGTTTGCCTTGGCCTCAAGCCCCTCAGTGAGAGAGGACTTCCATTGACATTTCCGG
AAGGTCACATTCCAGAAGCCCGAAGCCGTGAAGAAGGCAAGAGGACAGGGCTTCCCCTGTCCCT
GTCCCTATCATACCCTAGAGCATCCTTTTGTTTCTGTGGCTCCCACAGTGAAGGACACCTCATA
GCCTGCATCCTTTACCCCTCAAGAGTCCCCTTCAGCTGTTTATGTCACCTGTGCTGCGACAATC
CCTGGCAGCATCGAGCCAGCTAGAAATCTGCTTCTTAAATGTCGTCCCGTGTCGCCTTACAGAT
TCTGCTCGATGGCGCTCACAGAGGTTGTAATGTTGGTCTACAGAAGGCGTTTGTACCAAATCGT
TTCTTAACTCTGCTAGAGTGATCACGGCCCTCAACACGCTTTGTATGCTGGGGTGGGGGAATGG
AATTATATATGTGAATAGGATATATTTTTCCTAACAGTTCACTCTGGGTCCTACCTGGGATGTT
CGCATCACGACAGGGAAGGACTCACAAGGTGCGCATCCTGTCTGCAGCATTCCGACAGCTGCCT
TACCAACCCACAAGCTGCAGGACTTCTGAATGAAGGCAGATGGTGCGCACCACGGCCAGTCCCA
GGAAGAACCTAACTTCGTGACCGATAATTCATCTTTAAAAAAAAAAAAAACAACTATATTTTTA
CTGTCAAAACGAATGGGCTTCCCGGACGTTGCGGTGACCGGATGCCCCCTGTGCTTTTATATTT
TGTCACTGTAAGAGGTTTTCTGGCACAGACAAGCAAGTCAGGAATCCAGCTGACTGCACTAAAT
GGGGTGAACTCTGCATGTGCAAAGGGGGCACACCCAGACTCCAGAAATAGTAAATAAAGCTTTC
CTGTCAATGATGA

hide sequence

RefSeq Acc Id:

XM_006249576 ⟹ XP_006249638

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,131,401 - 49,212,604 (+)	NCBI
mRatBN7.2	12	43,470,941 - 43,552,152 (+)	NCBI
Rnor_6.0	12	49,479,639 - 49,561,038 (+)	NCBI
Rnor_5.0	12	51,192,341 - 51,333,677 (+)	NCBI

Sequence:

show sequence

GGGGAGAAGCAGCCTGCCCCCCGCCCTGACTCCGCCCTGCCCTGGCTCCGCCCCACCCTCCTGG
TTCCACCCTCCTGCCCCGCCCCCCAGGATGCTGGCACCAGCCAGGGGGACTGGGCTGCAGTTTC
ACCCCAGAGGTGGCCGTGGCCGCTCACAGGTCCATCAGGCCGCCTGGCTGTGAGCCCTGGCTTC
TGAAAGATTGATGCCACCCTGAACTTGACTCTGGGGGCGGTGAGAGTTGTGGGGAGGGAGGAGC
CACCCCTCCAGGGACAAAGTAGAAGCGCAGGCACACACACGAGCAGGGAAGGCGGCCCCACAGC
CTGCTCCGACATGGACTATTACTACTGCCCCAGCCTGCTGAAACTGCTTCGGTACCTGTGGAAC
CAGCTGAAGCAGTGTTTCTCCCGGCGGGCACCCGAGGCCAAGGACACTGACACCCTCGTGCAGG
AAGCCGACAGCCAGTATGGGACCTGGGCAGCCCAGCACCAGAACGGGGGCAGTTTTGGCCCGGA
GACTCCTTCTCCTGACAGCAGTGCTGCGTCTGCGGGAAAGCAGCCTCCAGGCAGTCACTTGTCC
TCGTACACCGAGTCCACGTCGGTGGAGCAACATGACAGCTCCAGGGATCGGCGCAGCTCCAGCG
TGGACCGCTCCAGTTCTGAGCTGGAGTCCACAGATGGCCCAGAGGGACCACCTCCGTCAGACGT
CTGTCCTGCAGAGGGAGAGGATGATTTCTCCTTCATCCATCAAACCTCAGTCCTTGACTCCAGT
GCCCTTAAGACCCGGGTGCAGCTGAGTAAGCGAAGCCGTCGCCGGGCGCCCATCTCCCACTCGC
TCCGGCGCAGCCAGTTCAGCGAGTCTGAGAGCCGGTCCCCTCTGGAAGAGGAGTCACACAGCGC
GTGGATGTTCAAGGACTCCACAGAAGAGAAGTCACCCAGGAGGGATGAATCCGATGAAGAGCCT
CCCAGGGTGGAGAGGACCCCTGTTGGCCACCCTCAGAGGATGCCTGTGTTTCCAGGCATGGACC
CAGCTGTGCTGAAGGCTCAGCTGCCCAAGAGATCAGAAGTGGACAGTCCTGGAGAGTCTCTAAG
CTGGACACCCCAGCCCAAGACCCCTAAGTCGCCCTTCCAGCCTGGGGTGCTGGGCAGTCGGGTG
CTGCCTTCCAGTGCAGAGAGAGAGGAGAGGTCTGAGGAGCGCTCACCCCAGTGGCTAAAGGAAC
TGAAATCCAAGAAGAGGCAGAGCCTGTATGAGAATCAAGCTTGACCGGACAGAAGATCACTATA
CCCACAAACTCAAGCCTTAACCGCCAGACGTCTGAGGCCAAGACACCCACTCTCCCTGACCACG
CTCACGTGCCTGGGCCTCTCCACCCTGAGGACGCCGTGCTGAGCCCCACCCGGGTCCCCTCGGG
AAGACCCTGTCCCGGGACTCGCTCCAGTCCACAGAGAGATCTTTCAGCTCTCCTTCAAGAAGTG
TCCAGGCCCGTGGATTGGCCTTTGGTGTGACAGTTGGCCTTCCTGCTCTCTGCGGACACCTCGC
CGGGCTCCCTAGGCTGGGGGTTCCACCTGGGCTCCGCCCCTGGCAGCCTTTCAGGAAGGACCCT
GGCAAGAAAGCCTGAATGACTCTTGGGTGGCAAAGGTCACCATCCAAGCGTTACACCGGTGTCT
CCCGGGTTGGGTTTGATTTTTTTTTTTTTACACCCCCCTTCCTGACAAGCTCTTCTTCCCCACT
AACTGCCTTCATTCTGATTTATAAGCACAGCCCAGCCCCATCTTGTCTGTATCCTTTTCCTTCC
TGTGAGGCCCTGGGCACAGTTGTCCTGGGTCTCGACACTCTCCTGTTTGCTTTAGAGGAGGATA
AAGCAATAATGCGGCCAGTTTCCCCTGAACCTTGACATGTGCTTGGGTCTCTGCATTGACAGCG
GAAAGGGTTGGGGGGCAGACAGTGACCGTTGCCTCCTGTCACCTGACCTCGCTGTCCAAGCCTA
CGAAAGCTTGTGACTTTCACCTTTGTCCACATCTGGGATGCTCTGATCTCCATGGGGGCAGCCT
TTGCCCCCAGTTCTCAAGCATTACGAACCTCTGTTGGAATTGTCCGTACCCCGGCCGCTCACAT
CCCGGACCTGTGCTTTCTGAACACCCATATCCTGCTGGAGAGAAGACTCAACCAAGTCAGCTTG
GAACAGACGTGGCCCTGACCCTGCCCTCCATGACCTACCCACCTGGCTAAGTGGTCGTCAAGGC
CCATGTGGATGTTGCTCTAACTGAAAGGCCCCTGTAGTGGGAGCCCCAGGCCAGATGCTGGGCC
GTGAGGTCTACGATGTCCGATGTCCTGCGTTGTGCTACCTGCATGCTCGCTCCTGGGAGTCTCG
GAGCCTCTGTACTCCTGACGCCTACTCTGTCTTGTTTCCTTTTAAGCCTTCAAGGTGACATCAG
GAGCCCCTGGCCCCAGGGGTCACCCCAGACTCACCAGGCCAACTGCCTGCAGCATGCTGGCAGC
TTCCAGAGACCTTTTACCAACCTTGCCTTGGTGACATGCTTGGTAGTTCCAAGGCGGTCTGTGG
CTGTGGAGGGCCCTGGGCCAGGTGTTCTGACGGATGTCTGCCTGGCTCGTGTGCCCAGCCATTG
CTGCCCCGACGTTCTCGGAGACAGAGTCTCTTGCTTCTGCTCCCTCTCTGCCTGGGTTCCCTTT
GGAAGGGTTTGGTGGGAATGGATGGCCGAGCTTGGTGTCTTAGGACAGTCACCTGTGCCTGCGG
ACTGAGGTGTTCAGCACCGAGGAGACTGCAGGCCCCACCTGCACCCCTCCCTGAGCTACTAGTG
AGCGGGCACACGCCTCTGAAATCACTTGGGGTTCAGTCTCCCTGCAGATGCTCCCGTAGTCCCT
GTTTCCTGTTCTGTTTTGTTTTTTAGAATCCATTTTGTATCCTGTGGCGATTTTGACCCAGTAG
CTTGCCAGGGACTTTTTTTCAAACACACTACAGGGTTGAGGGTATAGCTCAGTGGGCAGAGTAT
GTATCTAACGCAGAGGACCAGAGTTCTGTCCAGGGACCACATAAATGAGGTGTGGCGGTGCACA
TCTGTGATTCTAGTGCCTGGCAGATGGGGGGGGGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAG
GCTCAGAAGTTTAAGGATATCCTTGGCTATATAAGAAAGCTGCAGATCAGCCTGGGCTAGAAAA
CACTTGAATAGAACAAAGCAAAGCAACATTCTGCTCGTGATTTTCGTCTTAACCTGTCTTGACT
CCCTTCTCCTGGGGAGTAGGAGCCTAGGGTAAATTAAGACCATGGCAGTAGGAGTCGATCCCAT
CTTAACTATCACAGTAGTTAAGGCACAGTAGAATCAAAACGTGCTTGCCCTGTCTGTCATTGCC
TAACCCCTCACACCTGATGAGAAATCAACTTGATTCCTCACGAAGACCCACATAAGGACCTCGG
CTCTGACCAGGGCAGGTTTCTACATCTCCCCCCAAGGAACCCAAGATCTGACAATCTCACTAGG
TCTGCAGTGACCTGCGTTGGCTGTGTCCCCCTATTTAGAGTCAGTGCAGCACAGCGAGCAGAGG
CCCATGCTTGGATCCTTAGCTGAGCTGAGCGAGTGGCTCACTTAGTCCCCTTTTTAAAACCAGG
TGAGGCTCTGGGGCCAAGTCATGGGCCGTATGCCTCCCCATGACCCTCCTTTTAAAGGAACCTA
ATAATGCCTTAATCGTGTGTGATAGGCACCTGTGTCCCCCTCCCCCAACCCTCCCTCCTGGTGA
CTGGATGTTTGCAGAGTCTCACATACGCCTCCATCTTCTCTATGCCCATCAGCATTTTGACATC
TGACCTTTGGGTACGCCCCTCCCACCCAGTAGATAGGCATTCTCCTGCATAGTCTGTGGCCTCA
TACACGGAGGCCTTTGCCCTGCGAAATGGCGTGGCAGGATGCTCTCGGGCATCCTCAGCTCCAA
TGGAGAAACTGGGTGGTCCTGGGGAGTAGGAGCCTAGTGTAAAAATTATCTCACGCCCCCCGGG
TTGGACTCAGGGGCAGACGGGATCAGAGGAGTTTATAGGGTAGGGGAGCAGGCAAAAGGTTCCA
TCAGATGCCTATTTTCCTTCTACAATACTGCCCCCTGCAGGAAGCAGCTGTTAAAGCAAAGTCA
TCAATTTAGCTGCTGAGCAGGGATTGGAAAAAACACTCCTGTGATTTCCAAAGGAAACGCAGCG
AGTCCTGGTGCGTGTATGTTGGGGGGGCGTGGGGGTAAGGACTGCTGTCAATCCTGGCTTTACA
GCCACTCATTCTGGATCTAGGCTTGACTGAAAAGTGGAAAGCCACCCACCTCTTAATATCCAGC
CCTGGCGAATCATTTGGGCGACAGAGACGCTGTGCCCTCCAAATGTGCCTTTGCCCTGTCGACA
GGAAACGGATCTCCAAATACCCAGGTTCCCCACATTGCTGGGGACTAGCAGGATCCACTCAGCA
TCTCTGAGTTTGCCTTGGCCTCAAGCCCCTCAGTGAGAGAGGACTTCCATTGACATTTCCGGAA
GGTCACATTCCAGAAGCCCGAAGCCGTGAAGAAGGCAAGAGGACAGGGCTTCCCCTGTCCCTGT
CCCTATCATACCCTAGAGCATCCTTTTGTTTCTGTGGCTCCCACAGTGAAGGACACCTCATAGC
CTGCATCCTTTACCCCTCAAGAGTCCCCTTCAGCTGTTTATGTCACCTGTGCTGCGACAATCCC
TGGCAGCATCGAGCCAGCTAGAAATCTGCTTCTTAAATGTCGTCCCGTGTCGCCTTACAGATTC
TGCTCGATGGCGCTCACAGAGGTTGTAATGTTGGTCTACAGAAGGCGTTTGTACCAAATCGTTT
CTTAACTCTGCTAGAGTGATCACGGCCCTCAACACGCTTTGTATGCTGGGGTGGGGGAATGGAA
TTATATATGTGAATAGGATATATTTTTCCTAACAGTTCACTCTGGGTCCTACCTGGGATGTTCG
CATCACGACAGGGAAGGACTCACAAGGTGCGCATCCTGTCTGCAGCATTCCGACAGCTGCCTTA
CCAACCCACAAGCTGCAGGACTTCTGAATGAAGGCAGATGGTGCGCACCACGGCCAGTCCCAGG
AAGAACCTAACTTCGTGACCGATAATTCATCTTTAAAAAAAAAAAAAACAACTATATTTTTACT
GTCAAAACGAATGGGCTTCCCGGACGTTGCGGTGACCGGATGCCCCCTGTGCTTTTATATTTTG
TCACTGTAAGAGGTTTTCTGGCACAGACAAGCAAGTCAGGAATCCAGCTGACTGCACTAAATGG
GGTGAACTCTGCATGTGCAAAGGGGGCACACCCAGACTCCAGAAATAGTAAATAAAGCTTTCCT
GTCAATGATGAC

hide sequence

RefSeq Acc Id:

XM_017598547 ⟹ XP_017454036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,069,929 - 49,212,604 (+)	NCBI
mRatBN7.2	12	43,409,479 - 43,552,152 (+)	NCBI
Rnor_6.0	12	49,418,026 - 49,561,038 (+)	NCBI

Sequence:

show sequence

CGCTTCCCGCTCGAGCCCCGCCTCCGGCAGCGAGGCTGCGCGCGCCGCGGCAGGTGCGGGCGGG
CAGGTGCGTCGCGGCGGGCCACTGCGCCCTGCAGAGACAGCCTGTGGGCACAGTCGCCTTCTTC
CCCATGCTTCTGCTATGGGCTTGAGTGGATAGCCCATTCGCCATGAGCCGTGACCCCACTGGTG
TTCCCATGTGGCCCCTTGGCCCTCGTCCAGGACCTGTCAGCTTAGCAGTTGCGTCTCCGTTTCT
GATGTGCTTAATCCTCATGGAGCTGCATTCGTAACCATGGCAACTCGGGTCGAAGTTGGCTCTA
TCGCATCCCTGAGGGCGGGGCCCGCCGGCCTTGGTGACATCGGCAGGGAGGAAACCCTGAAGAG
GACCTACTTTTGCCAGACTGGGGACCTCCCTGGGGCGTCCTCCACCAGGATCCGAAGTGCAAAG
AACCCCCTCCAGGCCCACCTGTTCCCACTACCCATTGCGCCCAAGCCTTTCCTTAAGGACCAGG
TGCCCGAGAGGAAGGCTTCTGTCAAATCCTCGTGGTCTGGTGGTGCCACCCAGCCTCGTCCTTC
AGCCCAGGCTGCTGAGGAGGAAGCGAAAGAGGACTTGGCTAAAACAATGCCAAGCCTAGCTGGC
GAGGGGGCAGACCGAGGGGAGGCCCTGCAGAATGGCCCGTCTGTACCTAACAAAGCCACGTTCC
TGAGGTCTGGCCCTAGCACTATGGGCCTCTTTGAAACAACCAAAGCTGGACCCGGCCTGGGCAA
AGGGACTGGTGAGGGGAGCCGGGAGGCCAGCCCTCGGGCAACCCAGACGTCTCCCTTAAGTGCC
AGGCCTGAGGTGGCCACCAAGCCAGCCCTACCCGCTCGGAAGCCCCCAGTGACTCTGCCCCGAC
CAACCTCCCTGTCGCAGGACACTGGGTCTGCTATTTCTCAGGGGGAGGCAGGCCGAGCCCAACC
ATTGCCAAAGGCCCACAGTGTGGAGGATCCCGCTGACCAGGCTCCAGAGGCCAAGCCTGTGAGG
AGACGGCCTCTGTCAGCGGTGTTCAGCGAGTACCTGCAGCCCCTAAAGCCAGGCTCGGGGGGAG
TGGCAGTCACGGGCAAAGTCCCCCCTACACCTCCCGAGAAGACGTGGGTGAGGAAGCCCCGGCC
TTTGTCTGTGGACCTAACTTCCATTTTTGAGAGTGGAGACACGTTGCTGAGGAAGGTGACTAGG
GAGCAGAGCACTGCAGAACGCCAGGGCCCAGAGAGGCCAGGCGTGGAGCCCAGGGGCAATGTGG
AGAGCCCTGCCCGCGTGGATGGCACCCCTCGGGACCCTGATGCGGAATTCCAGGAGCTGTCAAA
GAGGCTCCATGCACGGAAGGAGAAGATGGTCCTTAAGCAAACAGACACAGACAGTCCCAGGGCT
CCAAGGGCCAGGGCTACCCCTGGAGATGATCAGAGTCCCCAGCAAGAGGAAGCCATGCCAGAGC
AGCAATGGGAGAAGGTGCAGGAGTCCCCTTCACCCAGACCTGAAAGAGGGCTGGGGCTGACAGA
GGTCAAGGGTGAAAGGCTCGACCAGGAGGCTTCTGCCCGGACGGAGAGGAAGCCTGCAGGAAGT
GTCAGGAAGCGTTTCAGTCTGTTTGGGGAAGACAGCGCAGGGGCCTTGGCAGTGGTACCTGAGC
CCAGCCCTGTGACCCCAGAGTCTCCGTCCTCAGCGTCCACAGTGTCGACAGCGTCCACAGTGCC
AGAGCCTTCAAGAGCTGGTGTGAACGTTCAGGCTCGAATCAAAGGCTGGTCTGTGGAGAGAGCA
GGGGAGGAGAAGCCAGAGGTCTGGAGAAGGGCCTCCCAGGCTCGGCCGTTGCCTGCGGATTTGA
CCAAACCGTTCTCGAGGTCGGCTTCGAGCAGTGAGATTGGGTACGAGAAGTGTGCCACGCTGGG
CGGCGAGCTCCCCGGGGAAAGGAGAGAAAAGCTTAAGGAAAGGCATGGTTTGGATAGACCCTCT
GCCACAAAAAGTCCTTGGAAGTCTGAGGCTTCCCAGAAGTCTAGGCAGACAGAGCTCAAAGATG
CCTCCGACCAGGACCCTGATAGGTGTTGGAGTGCTCGCTCGGTGGGAGGCGCAAGCCCTTCTGA
AGTCAGTCCGGAGGATGACGGAAGCTTCCAGAAGGTGTGGGCCACAGTGTTTGAGCATCACGTG
GAGAGACACACAGTGGCCGACCAGGCAGGCTGTTGTCTCTCCGCCACACCCCCTTTCGATGTGG
CCGACACACCGGATCCCAGACCGAAGCCTGAGAATTGGCCAGGGAAGGAGCCACCAGGAGTCAC
AGACGAGAGAGACCGCTCCAGGTGGTCGGACCGTGCTGACCTGGGGATGCTGGGACGGCCTGCC
CTTGTCGATGTTGCGCTGAGACCGTATCCCACACCTGTCCCCGGGAGACACCCCATGGAAGAGA
GGCACAGCCGCTCTGTCCCCAGGCATTTAGAAAGTCCCCCCGTGTCCCAGAGGGTTCAGCCTAA
GTATGACGTCATGCATGCCTCAGGAGAGCGGGCACATAGCGAAGCAGTGTCCACGGTGCCTGAG
GAGAAGGCGGTGACCCTGCACAGTGGCAGATCTCGGCTCTCGCTGCCGGCTCGGCAGCTGTCCC
AGGAGGTCAACCCTTCTTACCTGGACTCTTCTCTGCAGGGTAGTGGGGGTGCCGTCCAAAGGGC
AAGTCAGTTATGGGAAGCTAGGGGCAAGGAAGGCAGCAGATCAAAGCTAGACTGTCAGCAGCCA
GGGGATGGATTTGGGGGCTCTTGCCAATCGTCCAAATGGGCAGGAGTGGGGGTGACAAACTGGC
ACAGCAGCGCTGTGGTCAGCAAAGATCTTGGTACTGCCCAAAGGGGTCAGTCCTGGAGTGTCTT
TTCAGATCTTCCATCCAGGGCCAGCATTGAGCCCCGTGACTCCCAAGTACAGGCAGGGATTGAC
TCATTGTCCCAGCAGAAGGGACCCCTCATGGTCGCCAGTGAGGATAACCCAAGGCTGGCCCAGG
TGGCCCAGCCTGAAGTCAGAATGTGGAGGTCCAACCCTTCAGAGCCGAGGGTGGATAGGTTGAG
GCGACGGACTTTGCCCCATGATGTGAAGTTCGATCCATTCAGCCTCCTTGGGCCAGAGAGCTCT
TCCGAAAGGCAGCAGCGACCAGCAGATGGTCTGACCTTCCCAACCTGTGCCTTAAAGAGACCCC
ACCAGCAGGCACAAACTCAGGGGGGGACACCGGATGCCTCACAAGGCAGGACTTTCCTGGTGGA
GAAGCTGGGGCCATCTGCAGAGCCTGCTGCGACGTTCTTCGCGGTGACTTACCAGGTTCCTGAC
ATTCAGAAGGCCAAGAGTGTGGTTAAGCCAGGGCCTGAAAACGTTTCGGAACCTTCCAGAAAAA
CGCCTCCACCTCCTTCACCTCGCTCTGTTGTGTCTGCGTTGCCTTCTCCTGGCCGTGAAGAGCT
GTGGTCTCCCGCCAGCAGTAAGGGCTACGCTAAGGGGAGAGAGTATGAAGAAGTAAGGAACCTT
TCAAAACACCCCAAGTCCACAGACCAGCCGGCGTCTGCAGGGGACAGGACTCTGGATCCTTCCA
GGGAGAGAATCATTGATGTGGATGCTCTGAGGTTTCATCGAGAGTCAGAAGACGACGCTGTGAA
GTATCGCAATCTCGGGGCATCCTCAGGCGAAGATGCCTCACAGACACCCCTGGTCCTGAGGCGG
CCCAGAAGTCTCCTGATGAGGAGGAGAACAGAGGTGATCAGCGAAACGTTCCCAGGGAAGATGA
GGGATGGCTACAGATCCAGTGTTCTTGACCTTGATTCTCTGATGGCTGAGTACAAGGAACAGTT
GAGCAGGAGTCCCAGCAAGGCCCAGGAGCAGCAGGACAGCCCTACAGAGCCCAGTGGCTCTCCT
CAGGAGAGGTCAGGTTGGCCCAAGGAGGCGGAGTGGAGAAGGAGGAGCCTGAAGGAGGCTCCTC
AGTCAGACGGTGTCGGTGTCGGGCAACAAACAGGGCCCTCTGTGAAAGTTCTCCACTCTCCTGG
CCCCAGCAAGCAGCCAGCAGAACCCCTAGGGGTAGCCATGGCCACCAAGTCTGGCCTGCCACTG
TGGGCACCACCACAGTCAGCTTCTGGGGAAAACTGTCCCTCACCTTCTTCCGTTCCTGCTGGCT
CCAGGAGGAAATCTCCAGGCATCGCTGAGTTGGAAAGCAAGCCCTCCTCCAGTGAGCACCAGGG
TACAAAGCGTAGGCAAGGTTCAGTCAAGTCCCAGGAGCTAGGCAGCGGGGACCCTGTCTCCCCC
AGGTCACCCCCCTCTGACCGGAAGAAAGGGACTCCAAGGAGATCCACTGTTCAGGGAGTGGAAG
GCAATGGGGTACAGTGGGGAACCCCCCCACATGATTCTGTTTGGTCACCGATGGACATCAAGAG
GGCTTGCTCGGAGAAGGGGCCCCCAGCCAGGGTCCGGGAGGGCCTGTCCGTCATGCAGGATGCC
AGGGAGCGGAGAGGAGAACAGTCCAGAGGGAAGCCTGACCTCCCTGCCGAGACTCCCAAGGTCG
CTGAGGGACCCTGTCAGAGGGATACGAGGAGGCTGGAAGGCCCTAAGCTGCCTCTGCAGAATCT
GGAGCGGAGGGATGGCCGTCAGGATGGCCAGCAGCCTCTTGGGCAGGTGTCCCCCGTTGCCTCC
GTCCCCCGGCGAAGCCACAGCTTTTGCAAGGACAAGAGGAATAGTCTCCTCGTGAACCAGCTGA
AGCAGTGTTTCTCCCGGCGGGCACCCGAGGCCAAGGACACTGACACCCTCGTGCAGGAAGCCGA
CAGCCAGTATGGGACCTGGGCAGCCCAGCACCAGAACGGGGGCAGTTTTGGCCCGGAGACTCCT
TCTCCTGACAGCAGTGCTGCGTCTGCGGGAAAGCAGCCTCCAGGCAGTCACTTGTCCTCGTACA
CCGAGTCCACGTCGGTGGAGCAACATGACAGCTCCAGGGATCGGCGCAGCTCCAGCGTGGACCG
CTCCAGTTCTGAGCTGGAGTCCACAGATGGCCCAGAGGGACCACCTCCGTCAGACGTCTGTCCT
GCAGAGGGAGAGGATGATTTCTCCTTCATCCATCAAACCTCAGTCCTTGACTCCAGTGCCCTTA
AGACCCGGGTGCAGCTGAGTAAGCGAAGCCGTCGCCGGGCGCCCATCTCCCACTCGCTCCGGCG
CAGCCAGTTCAGCGAGTCTGAGAGCCGGTCCCCTCTGGAAGAGGAGTCACACAGCGCGTGGATG
TTCAAGGACTCCACAGAAGAGAAGTCACCCAGGAGGGATGAATCCGATGAAGAGCCTCCCAGGG
TGGAGAGGACCCCTGTTGGCCACCCTCAGAGGATGCCTGTGTTTCCAGGCATGGACCCAGCTGT
GCTGAAGGCTCAGCTGCCCAAGAGATCAGAAGTGGACAGTCCTGGAGAGTCTCTAAGCTGGACA
CCCCAGCCCAAGACCCCTAAGTCGCCCTTCCAGCCTGGGGTGCTGGGCAGTCGGGTGCTGCCTT
CCAGTGCAGAGAGAGAGGAGAGGTCTGAGGAGCGCTCACCCCAGTGGCTAAAGGAACTGAAATC
CAAGAAGAGGCAGAGCCTGTATGAGAATCAAGCTTGACCGGACAGAAGATCACTATACCCACAA
ACTCAAGCCTTAACCGCCAGACGTCTGAGGCCAAGACACCCACTCTCCCTGACCACGCTCACGT
GCCTGGGCCTCTCCACCCTGAGGACGCCGTGCTGAGCCCCACCCGGGTCCCCTCGGGAAGACCC
TGTCCCGGGACTCGCTCCAGTCCACAGAGAGATCTTTCAGCTCTCCTTCAAGAAGTGTCCAGGC
CCGTGGATTGGCCTTTGGTGTGACAGTTGGCCTTCCTGCTCTCTGCGGACACCTCGCCGGGCTC
CCTAGGCTGGGGGTTCCACCTGGGCTCCGCCCCTGGCAGCCTTTCAGGAAGGACCCTGGCAAGA
AAGCCTGAATGACTCTTGGGTGGCAAAGGTCACCATCCAAGCGTTACACCGGTGTCTCCCGGGT
TGGGTTTGATTTTTTTTTTTTTACACCCCCCTTCCTGACAAGCTCTTCTTCCCCACTAACTGCC
TTCATTCTGATTTATAAGCACAGCCCAGCCCCATCTTGTCTGTATCCTTTTCCTTCCTGTGAGG
CCCTGGGCACAGTTGTCCTGGGTCTCGACACTCTCCTGTTTGCTTTAGAGGAGGATAAAGCAAT
AATGCGGCCAGTTTCCCCTGAACCTTGACATGTGCTTGGGTCTCTGCATTGACAGCGGAAAGGG
TTGGGGGGCAGACAGTGACCGTTGCCTCCTGTCACCTGACCTCGCTGTCCAAGCCTACGAAAGC
TTGTGACTTTCACCTTTGTCCACATCTGGGATGCTCTGATCTCCATGGGGGCAGCCTTTGCCCC
CAGTTCTCAAGCATTACGAACCTCTGTTGGAATTGTCCGTACCCCGGCCGCTCACATCCCGGAC
CTGTGCTTTCTGAACACCCATATCCTGCTGGAGAGAAGACTCAACCAAGTCAGCTTGGAACAGA
CGTGGCCCTGACCCTGCCCTCCATGACCTACCCACCTGGCTAAGTGGTCGTCAAGGCCCATGTG
GATGTTGCTCTAACTGAAAGGCCCCTGTAGTGGGAGCCCCAGGCCAGATGCTGGGCCGTGAGGT
CTACGATGTCCGATGTCCTGCGTTGTGCTACCTGCATGCTCGCTCCTGGGAGTCTCGGAGCCTC
TGTACTCCTGACGCCTACTCTGTCTTGTTTCCTTTTAAGCCTTCAAGGTGACATCAGGAGCCCC
TGGCCCCAGGGGTCACCCCAGACTCACCAGGCCAACTGCCTGCAGCATGCTGGCAGCTTCCAGA
GACCTTTTACCAACCTTGCCTTGGTGACATGCTTGGTAGTTCCAAGGCGGTCTGTGGCTGTGGA
GGGCCCTGGGCCAGGTGTTCTGACGGATGTCTGCCTGGCTCGTGTGCCCAGCCATTGCTGCCCC
GACGTTCTCGGAGACAGAGTCTCTTGCTTCTGCTCCCTCTCTGCCTGGGTTCCCTTTGGAAGGG
TTTGGTGGGAATGGATGGCCGAGCTTGGTGTCTTAGGACAGTCACCTGTGCCTGCGGACTGAGG
TGTTCAGCACCGAGGAGACTGCAGGCCCCACCTGCACCCCTCCCTGAGCTACTAGTGAGCGGGC
ACACGCCTCTGAAATCACTTGGGGTTCAGTCTCCCTGCAGATGCTCCCGTAGTCCCTGTTTCCT
GTTCTGTTTTGTTTTTTAGAATCCATTTTGTATCCTGTGGCGATTTTGACCCAGTAGCTTGCCA
GGGACTTTTTTTCAAACACACTACAGGGTTGAGGGTATAGCTCAGTGGGCAGAGTATGTATCTA
ACGCAGAGGACCAGAGTTCTGTCCAGGGACCACATAAATGAGGTGTGGCGGTGCACATCTGTGA
TTCTAGTGCCTGGCAGATGGGGGGGGGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGCTCAGA
AGTTTAAGGATATCCTTGGCTATATAAGAAAGCTGCAGATCAGCCTGGGCTAGAAAACACTTGA
ATAGAACAAAGCAAAGCAACATTCTGCTCGTGATTTTCGTCTTAACCTGTCTTGACTCCCTTCT
CCTGGGGAGTAGGAGCCTAGGGTAAATTAAGACCATGGCAGTAGGAGTCGATCCCATCTTAACT
ATCACAGTAGTTAAGGCACAGTAGAATCAAAACGTGCTTGCCCTGTCTGTCATTGCCTAACCCC
TCACACCTGATGAGAAATCAACTTGATTCCTCACGAAGACCCACATAAGGACCTCGGCTCTGAC
CAGGGCAGGTTTCTACATCTCCCCCCAAGGAACCCAAGATCTGACAATCTCACTAGGTCTGCAG
TGACCTGCGTTGGCTGTGTCCCCCTATTTAGAGTCAGTGCAGCACAGCGAGCAGAGGCCCATGC
TTGGATCCTTAGCTGAGCTGAGCGAGTGGCTCACTTAGTCCCCTTTTTAAAACCAGGTGAGGCT
CTGGGGCCAAGTCATGGGCCGTATGCCTCCCCATGACCCTCCTTTTAAAGGAACCTAATAATGC
CTTAATCGTGTGTGATAGGCACCTGTGTCCCCCTCCCCCAACCCTCCCTCCTGGTGACTGGATG
TTTGCAGAGTCTCACATACGCCTCCATCTTCTCTATGCCCATCAGCATTTTGACATCTGACCTT
TGGGTACGCCCCTCCCACCCAGTAGATAGGCATTCTCCTGCATAGTCTGTGGCCTCATACACGG
AGGCCTTTGCCCTGCGAAATGGCGTGGCAGGATGCTCTCGGGCATCCTCAGCTCCAATGGAGAA
ACTGGGTGGTCCTGGGGAGTAGGAGCCTAGTGTAAAAATTATCTCACGCCCCCCGGGTTGGACT
CAGGGGCAGACGGGATCAGAGGAGTTTATAGGGTAGGGGAGCAGGCAAAAGGTTCCATCAGATG
CCTATTTTCCTTCTACAATACTGCCCCCTGCAGGAAGCAGCTGTTAAAGCAAAGTCATCAATTT
AGCTGCTGAGCAGGGATTGGAAAAAACACTCCTGTGATTTCCAAAGGAAACGCAGCGAGTCCTG
GTGCGTGTATGTTGGGGGGGCGTGGGGGTAAGGACTGCTGTCAATCCTGGCTTTACAGCCACTC
ATTCTGGATCTAGGCTTGACTGAAAAGTGGAAAGCCACCCACCTCTTAATATCCAGCCCTGGCG
AATCATTTGGGCGACAGAGACGCTGTGCCCTCCAAATGTGCCTTTGCCCTGTCGACAGGAAACG
GATCTCCAAATACCCAGGTTCCCCACATTGCTGGGGACTAGCAGGATCCACTCAGCATCTCTGA
GTTTGCCTTGGCCTCAAGCCCCTCAGTGAGAGAGGACTTCCATTGACATTTCCGGAAGGTCACA
TTCCAGAAGCCCGAAGCCGTGAAGAAGGCAAGAGGACAGGGCTTCCCCTGTCCCTGTCCCTATC
ATACCCTAGAGCATCCTTTTGTTTCTGTGGCTCCCACAGTGAAGGACACCTCATAGCCTGCATC
CTTTACCCCTCAAGAGTCCCCTTCAGCTGTTTATGTCACCTGTGCTGCGACAATCCCTGGCAGC
ATCGAGCCAGCTAGAAATCTGCTTCTTAAATGTCGTCCCGTGTCGCCTTACAGATTCTGCTCGA
TGGCGCTCACAGAGGTTGTAATGTTGGTCTACAGAAGGCGTTTGTACCAAATCGTTTCTTAACT
CTGCTAGAGTGATCACGGCCCTCAACACGCTTTGTATGCTGGGGTGGGGGAATGGAATTATATA
TGTGAATAGGATATATTTTTCCTAACAGTTCACTCTGGGTCCTACCTGGGATGTTCGCATCACG
ACAGGGAAGGACTCACAAGGTGCGCATCCTGTCTGCAGCATTCCGACAGCTGCCTTACCAACCC
ACAAGCTGCAGGACTTCTGAATGAAGGCAGATGGTGCGCACCACGGCCAGTCCCAGGAAGAACC
TAACTTCGTGACCGATAATTCATCTTTAAAAAAAAAAAAAACAACTATATTTTTACTGTCAAAA
CGAATGGGCTTCCCGGACGTTGCGGTGACCGGATGCCCCCTGTGCTTTTATATTTTGTCACTGT
AAGAGGTTTTCTGGCACAGACAAGCAAGTCAGGAATCCAGCTGACTGCACTAAATGGGGTGAAC
TCTGCATGTGCAAAGGGGGCACACCCAGACTCCAGAAATAGTAAATAAAGCTTTCCTGTCAATG
ATGAC

hide sequence

RefSeq Acc Id:

XM_039090200 ⟹ XP_038946128

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,069,994 - 49,212,604 (+)	NCBI
mRatBN7.2	12	43,409,538 - 43,552,152 (+)	NCBI

RefSeq Acc Id:

XM_063271226 ⟹ XP_063127296

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	49,071,476 - 49,212,604 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001389401	(Get FASTA)	NCBI Sequence Viewer
	XP_006249637	(Get FASTA)	NCBI Sequence Viewer
	XP_006249638	(Get FASTA)	NCBI Sequence Viewer
	XP_017454036	(Get FASTA)	NCBI Sequence Viewer
	XP_038946128	(Get FASTA)	NCBI Sequence Viewer
	XP_063127296	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM13977	(Get FASTA)	NCBI Sequence Viewer
	EDM13978	(Get FASTA)	NCBI Sequence Viewer
	EDM13979	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070952
	ENSRNOP00000070952.1
	ENSRNOP00000094014
	ENSRNOP00000094014.1
	ENSRNOP00000097170
	ENSRNOP00000097170.1
	ENSRNOP00000101530.1
	ENSRNOP00000102344.1
	ENSRNOP00000108133.1
	ENSRNOP00000109818.1
	ENSRNOP00000109826.1

RefSeq Acc Id:	XP_006249638 ⟸ XM_006249576
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6AJY8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDYYYCPSLLKLLRYLWNQLKQCFSRRAPEAKDTDTLVQEADSQYGTWAAQHQNGGSFGPETPS PDSSAASAGKQPPGSHLSSYTESTSVEQHDSSRDRRSSSVDRSSSELESTDGPEGPPPSDVCPA EGEDDFSFIHQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSQFSESESRSPLEEESHSAWMF KDSTEEKSPRRDESDEEPPRVERTPVGHPQRMPVFPGMDPAVLKAQLPKRSEVDSPGESLSWTP QPKTPKSPFQPGVLGSRVLPSSAEREERSEERSPQWLKELKSKKRQSLYENQA hide sequence

RefSeq Acc Id:	XP_006249637 ⟸ XM_006249575
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AS67 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDYLGDKLSVAQTHMTQWVGTVRRSFQEALHLVTATVGTERSGESAGRTPFKRTSSFRHLASRS RESFRRFSARSQQRFSSLRKRQPDSEAPDLNQLKQCFSRRAPEAKDTDTLVQEADSQYGTWAAQ HQNGGSFGPETPSPDSSAASAGKQPPGSHLSSYTESTSVEQHDSSRDRRSSSVDRSSSELESTD GPEGPPPSDVCPAEGEDDFSFIHQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSQFSESESR SPLEEESHSAWMFKDSTEEKSPRRDESDEEPPRVERTPVGHPQRMPVFPGMDPAVLKAQLPKRS EVDSPGESLSWTPQPKTPKSPFQPGVLGSRVLPSSAEREERSEERSPQWLKELKSKKRQSLYEN QA hide sequence

RefSeq Acc Id:	XP_017454036 ⟸ XM_017598547
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JZ88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATRVEVGSIASLRAGPAGLGDIGREETLKRTYFCQTGDLPGASSTRIRSAKNPLQAHLFPLPI APKPFLKDQVPERKASVKSSWSGGATQPRPSAQAAEEEAKEDLAKTMPSLAGEGADRGEALQNG PSVPNKATFLRSGPSTMGLFETTKAGPGLGKGTGEGSREASPRATQTSPLSARPEVATKPALPA RKPPVTLPRPTSLSQDTGSAISQGEAGRAQPLPKAHSVEDPADQAPEAKPVRRRPLSAVFSEYL QPLKPGSGGVAVTGKVPPTPPEKTWVRKPRPLSVDLTSIFESGDTLLRKVTREQSTAERQGPER PGVEPRGNVESPARVDGTPRDPDAEFQELSKRLHARKEKMVLKQTDTDSPRAPRARATPGDDQS PQQEEAMPEQQWEKVQESPSPRPERGLGLTEVKGERLDQEASARTERKPAGSVRKRFSLFGEDS AGALAVVPEPSPVTPESPSSASTVSTASTVPEPSRAGVNVQARIKGWSVERAGEEKPEVWRRAS QARPLPADLTKPFSRSASSSEIGYEKCATLGGELPGERREKLKERHGLDRPSATKSPWKSEASQ KSRQTELKDASDQDPDRCWSARSVGGASPSEVSPEDDGSFQKVWATVFEHHVERHTVADQAGCC LSATPPFDVADTPDPRPKPENWPGKEPPGVTDERDRSRWSDRADLGMLGRPALVDVALRPYPTP VPGRHPMEERHSRSVPRHLESPPVSQRVQPKYDVMHASGERAHSEAVSTVPEEKAVTLHSGRSR LSLPARQLSQEVNPSYLDSSLQGSGGAVQRASQLWEARGKEGSRSKLDCQQPGDGFGGSCQSSK WAGVGVTNWHSSAVVSKDLGTAQRGQSWSVFSDLPSRASIEPRDSQVQAGIDSLSQQKGPLMVA SEDNPRLAQVAQPEVRMWRSNPSEPRVDRLRRRTLPHDVKFDPFSLLGPESSSERQQRPADGLT FPTCALKRPHQQAQTQGGTPDASQGRTFLVEKLGPSAEPAATFFAVTYQVPDIQKAKSVVKPGP ENVSEPSRKTPPPPSPRSVVSALPSPGREELWSPASSKGYAKGREYEEVRNLSKHPKSTDQPAS AGDRTLDPSRERIIDVDALRFHRESEDDAVKYRNLGASSGEDASQTPLVLRRPRSLLMRRRTEV ISETFPGKMRDGYRSSVLDLDSLMAEYKEQLSRSPSKAQEQQDSPTEPSGSPQERSGWPKEAEW RRRSLKEAPQSDGVGVGQQTGPSVKVLHSPGPSKQPAEPLGVAMATKSGLPLWAPPQSASGENC PSPSSVPAGSRRKSPGIAELESKPSSSEHQGTKRRQGSVKSQELGSGDPVSPRSPPSDRKKGTP RRSTVQGVEGNGVQWGTPPHDSVWSPMDIKRACSEKGPPARVREGLSVMQDARERRGEQSRGKP DLPAETPKVAEGPCQRDTRRLEGPKLPLQNLERRDGRQDGQQPLGQVSPVASVPRRSHSFCKDK RNSLLVNQLKQCFSRRAPEAKDTDTLVQEADSQYGTWAAQHQNGGSFGPETPSPDSSAASAGKQ PPGSHLSSYTESTSVEQHDSSRDRRSSSVDRSSSELESTDGPEGPPPSDVCPAEGEDDFSFIHQ TSVLDSSALKTRVQLSKRSRRRAPISHSLRRSQFSESESRSPLEEESHSAWMFKDSTEEKSPRR DESDEEPPRVERTPVGHPQRMPVFPGMDPAVLKAQLPKRSEVDSPGESLSWTPQPKTPKSPFQP GVLGSRVLPSSAEREERSEERSPQWLKELKSKKRQSLYENQA hide sequence

Ensembl Acc Id:

ENSRNOP00000070952 ⟸ ENSRNOT00000082998

RefSeq Acc Id:	XP_038946128 ⟸ XM_039090200
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JZ88 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000094014 ⟸ ENSRNOT00000095507

Ensembl Acc Id:

ENSRNOP00000097170 ⟸ ENSRNOT00000119382

RefSeq Acc Id:	NP_001389401 ⟸ NM_001402472
- UniProtKB:	A0A0G2JZ88 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127296 ⟸ XM_063271226
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JZ88 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000102344 ⟸ ENSRNOT00000168511

Ensembl Acc Id:

ENSRNOP00000101530 ⟸ ENSRNOT00000135667

Ensembl Acc Id:

ENSRNOP00000109826 ⟸ ENSRNOT00000122557

Ensembl Acc Id:

ENSRNOP00000109818 ⟸ ENSRNOT00000167668

Ensembl Acc Id:

ENSRNOP00000108133 ⟸ ENSRNOT00000139251

Protein Domains

Tankyrase 1-binding protein C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2JZ88-F1-model_v2	AlphaFold	A0A0G2JZ88	1-1770	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698726

Promoter ID:

EPDNEW_R9247

Type:

single initiation site

Name:

RGD1306556_1

Description:

similar to hypothetical protein A530094D01

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	12	49,419,808 - 49,419,868	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306556	AgrOrtholog
BioCyc Gene	G2FUF-18890	BioCyc
Ensembl Genes	ENSRNOG00000052424	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000082998	ENTREZGENE
	ENSRNOT00000082998.3	UniProtKB/TrEMBL
	ENSRNOT00000095507	ENTREZGENE
	ENSRNOT00000095507.2	UniProtKB/TrEMBL
	ENSRNOT00000119382	ENTREZGENE
	ENSRNOT00000119382.2	UniProtKB/TrEMBL
	ENSRNOT00000122557.1	UniProtKB/TrEMBL
	ENSRNOT00000135667.1	UniProtKB/TrEMBL
	ENSRNOT00000139251.1	UniProtKB/TrEMBL
	ENSRNOT00000167668.1	UniProtKB/TrEMBL
	ENSRNOT00000168511.1	UniProtKB/TrEMBL
InterPro	Tankyrase-bd_C	UniProtKB/TrEMBL
	TNKS1BP1-like	UniProtKB/TrEMBL
NCBI Gene	288744	ENTREZGENE
PANTHER	PTHR22042	UniProtKB/TrEMBL
	SIMILAR TO HYPOTHETICAL PROTEIN A530094D01	UniProtKB/TrEMBL
Pfam	Tankyrase_bdg_C	UniProtKB/TrEMBL
PhenoGen	Kiaa1671	PhenoGen
RatGTEx	ENSRNOG00000052424	RatGTEx
SMART	Tankyrase_bdg_C	UniProtKB/TrEMBL
UniProt	A0A0G2JZ88	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJY8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AS67	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LJK5_RAT	UniProtKB/TrEMBL
	A0ABK0LL49_RAT	UniProtKB/TrEMBL
	A0ABK0LUL6_RAT	UniProtKB/TrEMBL
	A0ABK0M3B8_RAT	UniProtKB/TrEMBL
	A0ABK0M6P8_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	Kiaa1671	KIAA1671 homolog	RGD1306556	similar to hypothetical protein A530094D01	Symbol and Name Changed	1299863	APPROVED
2022-03-17	RGD1306556	similar to hypothetical protein A530094D01	Kiaa1671	KIAA1671 ortholog	Data merged from RGD:9342841	737654	PROVISIONAL
2015-08-13	Kiaa1671	KIAA1671 ortholog	RGD1560125	similar to OTTHUMP00000028561	Data merged from RGD:1560125	737654	PROVISIONAL
2014-08-25	Kiaa1671	KIAA1671 ortholog			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	RGD1560125	similar to OTTHUMP00000028561	RGD1560125_predicted	similar to OTTHUMP00000028561 (predicted)	'predicted' is removed	2292626	APPROVED
2008-04-30	RGD1306556	similar to hypothetical protein A530094D01	RGD1306556_predicted	similar to hypothetical protein A530094D01 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1560125_predicted	similar to OTTHUMP00000028561 (predicted)	LOC360825	similar to OTTHUMP00000028561	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC360825	similar to OTTHUMP00000028561			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-01-20	RGD1306556_predicted	similar to hypothetical protein A530094D01 (predicted)	LOC288744_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC288744_predicted	similar to hypothetical protein A530094D01 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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