Dpp10 (dipeptidyl peptidase like 10) - Rat Genome Database
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Gene: Dpp10 (dipeptidyl peptidase like 10) Rattus norvegicus
Analyze
Symbol: Dpp10
Name: dipeptidyl peptidase like 10
RGD ID: 1306427
Description: Predicted to have ion channel binding activity and potassium channel regulator activity. Predicted to be involved in positive regulation of protein localization to plasma membrane; protein localization to plasma membrane; and regulation of potassium ion transmembrane transport. Localizes to membrane. Biomarker of asthma. Human ortholog(s) of this gene implicated in asthma. Orthologous to human DPP10 (dipeptidyl peptidase like 10); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: dipeptidyl peptidase X; dipeptidylpeptidase 10; DPP X; DPPY; inactive dipeptidyl peptidase 10; Kv4 potassium channel auxiliary subunit; LOC363972
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21334,584,420 - 36,269,619 (-)NCBI
Rnor_6.0 Ensembl1339,434,217 - 39,643,361 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01339,430,590 - 41,173,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01344,555,443 - 46,284,894 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41335,536,212 - 37,304,931 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11335,550,178 - 36,224,524 (-)NCBI
Celera1334,424,493 - 36,082,282 (-)NCBICelera
Cytogenetic Map13q11-q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:12662155   PMID:15671030   PMID:15911355   PMID:16899223   PMID:17475505   PMID:19713751   PMID:22311982   PMID:25355692   PMID:27198182  


Genomics

Comparative Map Data
Dpp10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21334,584,420 - 36,269,619 (-)NCBI
Rnor_6.0 Ensembl1339,434,217 - 39,643,361 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01339,430,590 - 41,173,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01344,555,443 - 46,284,894 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41335,536,212 - 37,304,931 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11335,550,178 - 36,224,524 (-)NCBI
Celera1334,424,493 - 36,082,282 (-)NCBICelera
Cytogenetic Map13q11-q12NCBI
DPP10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2114,442,299 - 115,845,752 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl2114,442,299 - 115,845,780 (+)EnsemblGRCh38hg38GRCh38
GRCh382114,442,641 - 115,845,780 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372115,200,218 - 116,603,356 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362114,916,369 - 116,318,406 (+)NCBINCBI36hg18NCBI36
Build 342114,916,128 - 116,318,166NCBI
Celera2108,522,610 - 109,924,481 (+)NCBI
Cytogenetic Map2q14.1NCBI
HuRef2107,520,402 - 108,923,697 (+)NCBIHuRef
CHM1_12115,204,004 - 116,607,431 (+)NCBICHM1_1
Dpp10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391123,259,867 - 124,773,809 (-)NCBIGRCm39mm39
GRCm39 Ensembl1123,249,200 - 124,773,776 (-)Ensembl
GRCm381123,332,138 - 124,845,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1123,321,471 - 124,846,039 (-)EnsemblGRCm38mm10GRCm38
MGSCv371125,228,715 - 125,942,136 (-)NCBIGRCm37mm9NCBIm37
MGSCv361125,159,688 - 125,873,098 (-)NCBImm8
Celera1125,992,842 - 126,709,471 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
Dpp10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545913,453,491 - 14,109,194 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545913,456,765 - 14,767,495 (-)NCBIChiLan1.0ChiLan1.0
DPP10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B114,920,031 - 116,366,356 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B114,920,488 - 116,362,960 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B1,373,640 - 2,775,574 (+)NCBIMhudiblu_PPA_v0panPan3
DPP10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11933,432,091 - 34,707,133 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1933,434,154 - 34,706,758 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1933,715,851 - 33,791,831 (-)NCBI
Dog10K_Boxer_Tasha1933,926,232 - 34,250,809 (-)NCBI
ROS_Cfam_1.01934,868,027 - 36,137,400 (-)NCBI
UMICH_Zoey_3.11933,496,490 - 34,102,478 (-)NCBI
UNSW_CanFamBas_1.01933,671,202 - 34,944,692 (-)NCBI
UU_Cfam_GSD_1.01934,897,773 - 36,174,297 (-)NCBI
Dpp10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530386,415,799 - 87,669,110 (+)NCBI
SpeTri2.0NW_00493646953,950,034 - 54,548,724 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPP10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1520,619,778 - 22,011,997 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11521,365,700 - 22,011,989 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21525,169,920 - 25,353,483 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DPP10
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11014,434,244 - 15,822,419 (-)NCBI
Dpp10
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473229,385,895 - 30,748,424 (-)NCBI

Position Markers
D13Rat94  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01341,165,325 - 41,165,538NCBIRnor6.0
Rnor_5.01346,276,513 - 46,276,726UniSTSRnor5.0
RGSC_v3.41337,296,447 - 37,296,659RGDRGSC3.4
RGSC_v3.41337,296,446 - 37,296,659UniSTSRGSC3.4
RGSC_v3.11337,310,412 - 37,310,624RGD
Celera1336,073,799 - 36,074,012UniSTS
RH 2.0 Map13260.5RGD
SHRSP x BN Map138.0099RGD
FHH x ACI Map139.0799RGD
Cytogenetic Map13q11UniSTS
D13Rat115  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01339,639,775 - 39,639,912NCBIRnor6.0
Rnor_5.01344,763,184 - 44,763,321UniSTSRnor5.0
RGSC_v3.41335,719,010 - 35,719,148RGDRGSC3.4
RGSC_v3.41335,719,011 - 35,719,148UniSTSRGSC3.4
RGSC_v3.11335,732,698 - 35,733,174RGD
Celera1334,603,625 - 34,603,762UniSTS
RH 2.0 Map13281.2RGD
SHRSP x BN Map137.9399RGD
Cytogenetic Map13q11UniSTS
D13Rat148  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,231,399 - 40,231,550NCBIRnor6.0
Rnor_5.01345,348,495 - 45,348,646UniSTSRnor5.0
RGSC_v3.41336,303,945 - 36,304,094RGDRGSC3.4
RGSC_v3.41336,303,946 - 36,304,097UniSTSRGSC3.4
RGSC_v3.11336,317,910 - 36,318,059RGD
Celera1335,161,214 - 35,161,365UniSTS
SHRSP x BN Map138.0099UniSTS
SHRSP x BN Map138.0099RGD
Cytogenetic Map13q11UniSTS
D13Got109  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01339,472,624 - 39,472,750NCBIRnor6.0
Rnor_5.01344,593,852 - 44,593,978UniSTSRnor5.0
RGSC_v3.41335,574,614 - 35,574,740RGDRGSC3.4
RGSC_v3.41335,574,615 - 35,574,741UniSTSRGSC3.4
RGSC_v3.11335,588,579 - 35,588,705RGD
Celera1334,462,877 - 34,463,003UniSTS
RH 2.0 Map13186.6RGD
Cytogenetic Map13q11UniSTS
D13Got8  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01341,060,057 - 41,060,167NCBIRnor6.0
Rnor_5.01346,171,139 - 46,171,249UniSTSRnor5.0
RGSC_v3.41337,191,203 - 37,191,314RGDRGSC3.4
RGSC_v3.41337,191,204 - 37,191,314UniSTSRGSC3.4
RGSC_v3.11337,205,168 - 37,205,279RGD
RH 2.0 Map13206.1RGD
Cytogenetic Map13q11UniSTS
D13Got1  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01341,043,527 - 41,043,742NCBIRnor6.0
Rnor_5.01346,154,609 - 46,154,824UniSTSRnor5.0
RGSC_v3.41337,174,673 - 37,174,889RGDRGSC3.4
RGSC_v3.41337,174,674 - 37,174,889UniSTSRGSC3.4
RGSC_v3.11337,188,638 - 37,188,854RGD
Celera1335,953,479 - 35,953,694UniSTS
RH 2.0 Map13272.8RGD
Cytogenetic Map13q11UniSTS
D13Hmgc86  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,295,163 - 40,295,487NCBIRnor6.0
Rnor_5.01345,412,259 - 45,412,583UniSTSRnor5.0
RGSC_v3.41336,367,611 - 36,367,935UniSTSRGSC3.4
Celera1335,224,872 - 35,225,196UniSTS
Cytogenetic Map13q11UniSTS
D13Got236  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,278,361 - 40,278,541NCBIRnor6.0
Rnor_5.01345,395,457 - 45,395,637UniSTSRnor5.0
RGSC_v3.41336,350,720 - 36,350,900UniSTSRGSC3.4
Celera1335,207,979 - 35,208,161UniSTS
Cytogenetic Map13q11UniSTS
D13Got260  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01339,798,995 - 39,799,249NCBIRnor6.0
Rnor_5.01344,921,115 - 44,921,369UniSTSRnor5.0
RGSC_v3.41336,032,154 - 36,032,408UniSTSRGSC3.4
Celera1334,751,718 - 34,751,972UniSTS
Cytogenetic Map13q11UniSTS
RH132186  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,302,184 - 40,302,365NCBIRnor6.0
Rnor_5.01345,419,280 - 45,419,461UniSTSRnor5.0
RGSC_v3.41336,374,451 - 36,374,632UniSTSRGSC3.4
Celera1335,231,739 - 35,231,920UniSTS
Cytogenetic Map13q11UniSTS
RH144136  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,534,741 - 40,534,845NCBIRnor6.0
Rnor_5.01345,651,288 - 45,651,392UniSTSRnor5.0
RGSC_v3.41336,599,568 - 36,599,672UniSTSRGSC3.4
Celera1335,455,260 - 35,455,364UniSTS
Cytogenetic Map13q11UniSTS
AU048090  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,493,048 - 40,493,262NCBIRnor6.0
Rnor_5.01345,609,509 - 45,609,723UniSTSRnor5.0
RGSC_v3.41336,556,748 - 36,556,962UniSTSRGSC3.4
Celera1335,413,031 - 35,413,245UniSTS
Cytogenetic Map13q11UniSTS
AU047695  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,287,566 - 40,287,729NCBIRnor6.0
Rnor_5.01345,404,662 - 45,404,825UniSTSRnor5.0
RGSC_v3.41336,360,014 - 36,360,177UniSTSRGSC3.4
Celera1335,217,275 - 35,217,438UniSTS
Cytogenetic Map13q11UniSTS
AU047542  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01345,387,371 - 45,387,509NCBIRnor5.0
RGSC_v3.41336,342,630 - 36,342,774UniSTSRGSC3.4
Celera1335,199,889 - 35,200,033UniSTS
Cytogenetic Map13q11UniSTS
AU048615  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01340,285,258 - 40,285,438NCBIRnor6.0
Rnor_5.01345,402,354 - 45,402,534UniSTSRnor5.0
RGSC_v3.41336,357,617 - 36,357,797UniSTSRGSC3.4
Celera1335,214,878 - 35,215,058UniSTS
Cytogenetic Map13q11UniSTS
AU049248  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01339,450,042 - 39,450,211NCBIRnor6.0
Rnor_5.01344,571,270 - 44,571,439UniSTSRnor5.0
RGSC_v3.41335,552,033 - 35,552,202UniSTSRGSC3.4
Celera1334,440,294 - 34,440,461UniSTS
Cytogenetic Map13q11UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738036Lnnr4Liver neoplastic nodule remodeling QTL 43.64liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)13147622148Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131107975663Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13901674250513953Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1312193394108478121Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)131409633059096330Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)131409633059096330Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131444158250799665Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131444158251577031Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131981081464810814Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)132005247765052477Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)132148248158537177Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1324502279108770533Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132800833873008338Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132858445273584452Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132907693474076934Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132907693474076934Rat
2303030Bp327Blood pressure QTL 327arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133530126346444796Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1335301263107975663Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133614753364868393Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133614753399968921Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133734634882346348Rat
61453Pur1Proteinuria QTL 118.06total urine protein amount (VT:0000032)urine protein level (CMO:0000591)133937292742310885Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133937292784372927Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133950130093652524Rat
2292232Pur16Proteinuria QTL 1617.2total urine protein amount (VT:0000032)urine protein level (CMO:0000591)134106005747227923Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:32
Count of miRNA genes:32
Interacting mature miRNAs:32
Transcripts:ENSRNOT00000003527
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 60
Low 3 10 1 18 1 8 23 31 1
Below cutoff 30 22 15 1 15 8 8 6 12 7 8 8

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000003527   ⟹   ENSRNOP00000003527
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1339,434,217 - 39,643,361 (-)Ensembl
RefSeq Acc Id: NM_001012205   ⟹   NP_001012205
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21334,596,378 - 36,269,292 (-)NCBI
Rnor_6.01339,434,215 - 41,173,706 (-)NCBI
Rnor_5.01344,555,443 - 46,284,894 (-)NCBI
RGSC_v3.41335,536,212 - 37,304,931 (-)RGD
Celera1334,424,493 - 36,082,282 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017598873   ⟹   XP_017454362
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21334,584,420 - 35,413,483 (-)NCBI
Rnor_6.01339,430,590 - 40,300,186 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017598874   ⟹   XP_017454363
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21334,584,420 - 35,412,790 (-)NCBI
Rnor_6.01339,430,590 - 40,299,971 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039090946   ⟹   XP_038946874
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21334,584,420 - 36,269,619 (-)NCBI
RefSeq Acc Id: XM_039090947   ⟹   XP_038946875
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21334,584,420 - 34,793,411 (-)NCBI
RefSeq Acc Id: XM_039090948   ⟹   XP_038946876
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21334,671,142 - 35,413,486 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001012205   ⟸   NM_001012205
- UniProtKB: Q6Q629 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017454362   ⟸   XM_017598873
- Peptide Label: isoform X1
- UniProtKB: Q0GLB6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454363   ⟸   XM_017598874
- Peptide Label: isoform X3
- UniProtKB: Q0GLB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000003527   ⟸   ENSRNOT00000003527
RefSeq Acc Id: XP_038946874   ⟸   XM_039090946
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038946875   ⟸   XM_039090947
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038946876   ⟸   XM_039090948
- Peptide Label: isoform X5
Protein Domains
DPPIV_N   Peptidase_S9

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Strain Variation

Strain Sequence Variants (Rnor 6.0)
ACI/EurMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
ACI/EurMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
ACI/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
BBDP/Wor (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
BN/SsN (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
Buf/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
COP/CrCrl (MCW & UW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
University of Wisconsin (Dr. James Shull)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Charles River Laboratories
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)
F344/NCrl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
F344/NRrrc (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
FHH/EurMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
FHH/EurMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
FHL/EurMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
FHL/EurMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
GH/OmrMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
GK/Ox (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LE/Stm (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LEW/Crl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LEW/NCrlBR (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LH/MavRrrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LL/MavRrrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LN/MavRrrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
M520/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
MHS/Gib (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
MNS/Gib (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
MR/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
SBH/Ygl (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: SBH/Ygl sequenced by MCW
SBH/Ygl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SBN/Ygl (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: SBN/Ygl sequenced by MCW
SBN/Ygl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SHR/NHsd (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SHRSP/Gcrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SR/JrHsd (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Harlan Laboratories
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
SR/JrHsd (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SS/Jr (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SS/JrHsdMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
SS/JrHsdMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WAG/Rij (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WKY/Gcrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WKY/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
WKY/NCrl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WKY/NHsd (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WN/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306427 AgrOrtholog
Ensembl Genes ENSRNOG00000002595 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000003527 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000003527 UniProtKB/TrEMBL
Gene3D-CATH 2.140.10.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.1820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S9B_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S9B_N_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:363972 UniProtKB/Swiss-Prot
NCBI Gene 363972 ENTREZGENE
Pfam DPPIV_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dpp10 PhenoGen
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt DPP10_RAT UniProtKB/Swiss-Prot
  F1LPW1_RAT UniProtKB/TrEMBL
  Q0GLB5 ENTREZGENE, UniProtKB/TrEMBL
  Q0GLB6 ENTREZGENE, UniProtKB/TrEMBL
  Q6Q629 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-10 Dpp10  dipeptidyl peptidase like 10  Dpp10  dipeptidylpeptidase 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 Dpp10  dipeptidylpeptidase 10  Dpp10_predicted  dipeptidylpeptidase 10 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Dpp10_predicted  dipeptidylpeptidase 10 (predicted)      Symbol and Name status set to approved 70820 APPROVED