Sun5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 162,795,096 - 162,815,521 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 142,334,931 - 142,355,349 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 142,334,928 - 142,355,330 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 146,237,184 - 146,257,443 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 154,821,013 - 154,841,272 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 152,561,276 - 152,581,535 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 149,336,136 - 149,356,191 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 149,336,238 - 149,356,192 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 155,714,461 - 155,733,937 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 144,236,963 - 144,257,526 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 144,142,611 - 144,166,955 (-) | NCBI | | | | | Celera | 3 | 141,076,252 - 141,096,493 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q41 | NCBI | | | | |
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SUN5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 32,983,775 - 33,004,433 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 32,983,773 - 33,004,433 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 31,571,581 - 31,592,239 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 31,035,242 - 31,055,900 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 31,035,242 - 31,055,900 | NCBI | | | | | Celera | 20 | 28,325,457 - 28,346,116 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.21 | NCBI | | | | | HuRef | 20 | 28,358,932 - 28,379,615 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 31,471,124 - 31,492,379 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 34,710,456 - 34,731,124 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sun5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 153,698,108 - 153,713,281 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 153,698,108 - 153,713,004 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 153,856,188 - 153,871,365 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 153,856,188 - 153,871,084 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 153,681,926 - 153,696,820 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 153,547,631 - 153,562,525 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 159,690,209 - 159,704,617 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 75.99 | NCBI | | | | |
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Sun5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955422 | 28,252,375 - 28,273,814 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 28,252,245 - 28,273,457 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SUN5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 38,672,591 - 38,693,775 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 38,665,689 - 38,686,873 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 29,269,845 - 29,290,474 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 30,388,096 - 30,408,883 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 30,388,096 - 30,408,883 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SUN5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 22,255,919 - 22,272,304 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 22,255,921 - 22,272,170 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 21,901,547 - 21,917,932 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 22,941,683 - 22,958,062 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 22,941,685 - 22,958,076 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 22,217,334 - 22,233,703 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 22,327,357 - 22,343,740 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 22,758,316 - 22,774,696 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sun5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 171,255,168 - 171,270,723 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936485 | 19,686,894 - 19,701,946 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936485 | 19,686,894 - 19,701,946 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SUN5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 17 | 36,508,100 - 36,528,298 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 36,508,569 - 36,528,052 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 41,445,512 - 41,465,061 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SUN5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 37,354,675 - 37,376,019 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 37,354,706 - 37,375,442 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 89,529,125 - 89,552,733 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sun5 (Heterocephalus glaber - naked mole-rat) |
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