Samd14 (sterile alpha motif domain containing 14)

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Gene: Samd14 (sterile alpha motif domain containing 14) Rattus norvegicus

Analyze

Symbol:

Samd14

Name:

sterile alpha motif domain containing 14

RGD ID:

1306138

Description:

Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization; calcium-mediated signaling; and neuron projection development. Predicted to be active in several cellular components, including actin cytoskeleton; dendrite; and postsynaptic density. Orthologous to human SAMD14 (sterile alpha motif domain containing 14); INTERACTS WITH 6-propyl-2-thiouracil; acrylamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC287637; MGC109312; RGD1306138; SAM domain-containing protein 14; similar to cDNA sequence BC034054; sterile alpha motif domain-containing protein 14

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	79,957,111 - 79,972,347 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	79,957,758 - 79,972,341 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	84,906,816 - 84,921,334 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	10	84,404,886 - 84,419,406 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	10	79,798,056 - 79,812,637 (+)	NCBI	Rnor_WKY
Rnor_6.0	10	82,820,457 - 82,838,046 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	82,823,918 - 82,833,867 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	82,636,078 - 82,681,881 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	83,695,829 - 83,710,239 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	83,710,198 - 83,724,608 (+)	NCBI
Celera	10	78,731,479 - 78,746,020 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

osteogenesis imperfecta type 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP,ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

CGP 52608 (ISO)

choline (ISO)

cisplatin (ISO)

dexamethasone (ISO)

diazinon (ISO)

dimethylselenide (ISO)

dorsomorphin (ISO)

ethanol (ISO)

folic acid (ISO)

gentamycin (EXP)

indometacin (ISO)

L-methionine (ISO)

phenylmercury acetate (ISO)

reactive oxygen species (ISO)

SB 431542 (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament organization (IBA)

calcium-mediated signaling (IBA)

neuron projection development (IBA)

Cellular Component

actin cytoskeleton (IBA)

cytoplasm (IBA)

dendrite (IBA)

postsynaptic density (IBA)

Molecular Function

actin filament binding (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:30053369

Genomics

Comparative Map Data

Samd14
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	79,957,111 - 79,972,347 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	79,957,758 - 79,972,341 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	84,906,816 - 84,921,334 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	10	84,404,886 - 84,419,406 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	10	79,798,056 - 79,812,637 (+)	NCBI	Rnor_WKY
Rnor_6.0	10	82,820,457 - 82,838,046 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	82,823,918 - 82,833,867 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	82,636,078 - 82,681,881 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	83,695,829 - 83,710,239 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	83,710,198 - 83,724,608 (+)	NCBI
Celera	10	78,731,479 - 78,746,020 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

SAMD14
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	50,110,040 - 50,130,160 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	17	50,110,040 - 50,130,160 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	48,187,404 - 48,207,524 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	45,545,034 - 45,562,166 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	44,650,150 - 44,667,284 (-)	NCBI		Celera
Cytogenetic Map	17	q21.33	NCBI
HuRef	17	43,556,549 - 43,575,121 (-)	NCBI		HuRef
CHM1_1	17	48,252,984 - 48,271,564 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	50,977,142 - 50,997,267 (-)	NCBI		T2T-CHM13v2.0

Samd14
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	94,900,213 - 94,916,913 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	94,900,705 - 94,916,913 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	95,009,395 - 95,026,087 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	95,009,879 - 95,026,087 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	94,871,193 - 94,887,401 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	94,825,969 - 94,842,174 (+)	NCBI		MGSCv36	mm8
MGSCv36	11	95,762,502 - 95,778,232 (+)	NCBI		MGSCv36	mm8
Celera	11	104,598,802 - 104,636,478 (+)	NCBI		Celera
Cytogenetic Map	11	D	NCBI

Samd14
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	11,536,676 - 11,546,008 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	11,536,639 - 11,547,402 (+)	NCBI	ChiLan1.0	ChiLan1.0

SAMD14
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	17	49,076,058 - 49,094,497 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	49,077,639 - 49,087,938 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	17	44,202,161 - 44,220,197 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

SAMD14
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	26,116,362 - 26,131,975 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	26,117,707 - 26,132,132 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	25,509,501 - 25,525,593 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	26,910,855 - 26,926,948 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	26,912,217 - 26,926,784 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	25,678,647 - 25,694,739 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	25,937,276 - 25,953,378 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	26,067,233 - 26,083,334 (-)	NCBI		UU_Cfam_GSD_1.0

Samd14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	25,540,955 - 25,557,969 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	11,519,839 - 11,534,202 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936490	11,517,464 - 11,534,184 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SAMD14
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	26,296,016 - 26,315,422 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	26,295,159 - 26,315,548 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	26,335,448 - 26,354,669 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SAMD14
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	43,209,260 - 43,226,537 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	43,214,262 - 43,226,329 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	13,924,835 - 13,942,602 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Samd14
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	6,107,571 - 6,120,625 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	6,107,571 - 6,120,880 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Samd14
119 total Variants

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1	80676123	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6357896	96121100	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		0.003	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	9658275	104670812	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14487011	89062041	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14487011	104060283	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14487011	107057807	Rat
1554317	Bmd4	Bone mineral density QTL 4	9.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	19816042	99406971	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22427500	90627625	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	26521957	98003205	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	26521957	98952741	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29299504	107211142	Rat
2317042	Aia20	Adjuvant induced arthritis QTL 20	3.38		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	10	37565079	82565079	Rat
2317043	Aia7	Adjuvant induced arthritis QTL 7	3.82		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	10	37565079	82565079	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40035094	102359817	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40035094	104060283	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40035094	104060283	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	41142633	86142633	Rat
61463	Bp12	Blood pressure QTL 12	6.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	41333258	86333258	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42045676	104670812	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	42323132	87323132	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	42323132	87323132	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	42323132	87323132	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	42323132	87323132	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	42323132	87323132	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44441699	89441699	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44441699	89441699	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44441699	89441699	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45029650	95600334	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47369470	92369470	Rat
2293705	Bmd25	Bone mineral density QTL 25	7.1	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	49444551	81709989	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49444551	81709989	Rat
2293652	Bmd22	Bone mineral density QTL 22	4.9	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	49444551	81709989	Rat
2293669	Bmd33	Bone mineral density QTL 33	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	10	49444551	81709989	Rat
2293679	Bmd30	Bone mineral density QTL 30	3.5	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	49444551	81709989	Rat
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	50574707	95574707	Rat
70364	Bp72	Blood pressure QTL 72			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	51121100	96121100	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	51770177	107211142	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	51770177	107211142	Rat
1359017	Hrtrt21	Heart rate QTL 21	2.4		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	10	51772940	96772940	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	51774612	95600334	Rat
631535	Cm51	Cardiac mass QTL 51	3		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	51786282	91669536	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	53797385	107211142	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	53797494	98952626	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	54809292	99809292	Rat
2312662	Slep8	Serum leptin concentration QTL 8		0.05	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	10	57134272	102134272	Rat
2312668	Scl65	Serum cholesterol level QTL 65		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	57134272	102134272	Rat
2312672	Insul15	Insulin level QTL 15		0.01	blood insulin amount (VT:0001560)	serum insulin level (CMO:0000358)	10	57134272	102134272	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	57576521	102576521	Rat
2293698	Bss43	Bone structure and strength QTL 43	5.33	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra cross-sectional area (CMO:0001689)	10	59209888	104209888	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61345276	81714865	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61345276	98211570	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61345276	99703528	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61345276	99703528	Rat
61402	Niddm3	Non-insulin dependent diabetes mellitus QTL 3	4.58		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	61345413	82564856	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62057807	107057807	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62057807	107057807	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63221094	107211142	Rat
2298481	Eau9	Experimental allergic uveoretinitis QTL 9		0.0169	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	65927233	82565079	Rat
1357344	Bp249	Blood pressure QTL 249		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	66743655	98003205	Rat
2317029	Aia19	Adjuvant induced arthritis QTL 19	2.98		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	10	66978955	107211142	Rat
2317039	Aia6	Adjuvant induced arthritis QTL 6	4.31		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	10	66978955	107211142	Rat
10450498	Bp384	Blood pressure QTL 384		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	67750049	107211142	Rat
1642980	Bp300	Blood pressure QTL 300			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68383129	107211142	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68420376	107211142	Rat
2300172	Bmd57	Bone mineral density QTL 57	9.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	10	69738412	107211142	Rat
2293646	Bss25	Bone structure and strength QTL 25	10.96	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	10	69738412	107211142	Rat
2293663	Bss33	Bone structure and strength QTL 33	9.34	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	10	69738412	107211142	Rat
6893366	Bw106	Body weight QTL 106	0.3	0.47	body mass (VT:0001259)	body weight (CMO:0000012)	10	70199100	107211142	Rat
70193	Mcs7	Mammary carcinoma susceptibility QTL 7	2.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72224939	107211142	Rat
2298548	Neuinf7	Neuroinflammation QTL 7	3.4		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	10	72224939	107211142	Rat
2306793	Ean5	Experimental allergic neuritis QTL 5	4.7		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	72552416	93995749	Rat
12880053	Cm104	Cardiac mass QTL 104		0.009	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	73452992	83463334	Rat
1358188	Ept9	Estrogen-induced pituitary tumorigenesis QTL 9	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73453136	96120911	Rat
2292617	Ept18	Estrogen-induced pituitary tumorigenesis QTL 18	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73453136	96120911	Rat
12880050	Am10	Aortic mass QTL 10		0.016	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	74372084	84007272	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	74372084	94965338	Rat
631537	Oia4	Oil induced arthritis QTL 4			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	75631887	87055282	Rat
2325836	Bp346	Blood pressure QTL 346		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76246085	84007272	Rat
10450495	Bp383	Blood pressure QTL 383		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76246085	94965338	Rat
2292438	Bp311	Blood pressure QTL 311			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76246085	107211142	Rat
1302404	Cia27	Collagen induced arthritis QTL 27	2.6	0.0045	joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	10	76452683	107211142	Rat
4889492	Pancm2	Pancreatic morphology QTL 2	3.2		pancreatic beta cell morphology trait (VT:0005217)	ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814)	10	76748906	107211142	Rat
724516	Uae17	Urinary albumin excretion QTL 17	3.6		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	10	78210622	85220348	Rat
1300107	Rf18	Renal function QTL 18	3.41		urine output (VT:0003620)	timed urine volume (CMO:0000260)	10	78775516	98279596	Rat
1358915	Stresp7	Stress response QTL 7	3.52		blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	78899655	87307728	Rat
634354	Rends3	Renal damage susceptibility QTL 3		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	10	79813789	85160854	Rat

Markers in Region

Pdk2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	79,972,807 - 79,973,068 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	82,838,525 - 82,838,785	NCBI	Rnor6.0
Rnor_5.0	10	82,649,540 - 82,649,800	UniSTS	Rnor5.0
RGSC_v3.4	10	83,710,703 - 83,710,963	UniSTS	RGSC3.4
Celera	10	78,746,488 - 78,746,748	UniSTS
Cytogenetic Map	10	q31	UniSTS

RH131984

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	10	82,836,933 - 82,837,122	NCBI	Rnor6.0
Rnor_6.0	10	82,837,663 - 82,837,853	NCBI	Rnor6.0
Celera	10	78,745,650 - 78,745,843	UniSTS
RH 3.4 Map	10	722.6	UniSTS
Cytogenetic Map	10	q31	UniSTS

RH141314

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	79,972,738 - 79,973,312 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	82,838,456 - 82,839,029	NCBI	Rnor6.0
Rnor_6.0	10	82,835,813 - 82,836,373	NCBI	Rnor6.0
Rnor_5.0	10	82,649,471 - 82,650,044	UniSTS	Rnor5.0
RGSC_v3.4	10	83,710,634 - 83,711,207	UniSTS	RGSC3.4
Celera	10	78,746,419 - 78,746,992	UniSTS
RH 3.4 Map	10	721.1	UniSTS
Cytogenetic Map	10	q31	UniSTS

MARC_7915-7916:996688163:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	79,973,500 - 79,974,187 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	82,839,218 - 82,839,904	NCBI	Rnor6.0
Rnor_5.0	10	82,650,233 - 82,650,919	UniSTS	Rnor5.0
RGSC_v3.4	10	83,711,396 - 83,712,082	UniSTS	RGSC3.4
Celera	10	78,747,181 - 78,747,867	UniSTS
Cytogenetic Map	10	q31	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									69	4	18
Low	3	32	13	10	5	10	1	3	5	27	15	11	1
Below cutoff		11	39	26	14	26	6	7		4	8		6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC091329	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000005519 ⟹ ENSRNOP00000005519

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	79,957,758 - 79,972,294 (+)	Ensembl
Rnor_6.0 Ensembl	10	82,823,918 - 82,833,867 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000100588 ⟹ ENSRNOP00000090621

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	79,965,951 - 79,972,341 (+)	Ensembl

RefSeq Acc Id:

NM_001024966 ⟹ NP_001020137

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	79,957,807 - 79,972,344 (+)	NCBI
Rnor_6.0	10	82,820,457 - 82,838,046 (+)	NCBI
Rnor_5.0	10	82,636,078 - 82,681,881 (+)	NCBI
RGSC_v3.4	10	83,695,829 - 83,710,239 (+)	RGD
Celera	10	78,731,479 - 78,746,020 (+)	RGD

Sequence:

show sequence

GTCCTCCCCTCTCCTGCCCGGCATTCGCCCCAACACCATGGGCCTGAGGGGTTCCTGGGGCGCC
GGACGCTGAAAATGACGGATGCTGGAGCTCTCTTGAGTCATGGCTTCCTCAAAGCTTCGAGAAC
CTGTGGATGAAGTTTTTGACCTGGACTTGGCTGTACCAGAGACCACCAGACTGGACAGCAGCTT
ACACAAAGCCAGGGCTCAGCTGCTGGTCAAGGGTCGGAGACACCGGCCTTCCCGCTCCAGGCTA
CGTGACAGTACCAGCTCTGCTGAGGACGGTGAAGGCTCTGATGGGCCCGGAGGCAAGGTGACCG
ACGGCTGCGGTAGCCCGCTGCACCGGCTGCGCTCGCCTTTGCACTCGGGCCCAGGCTCCCCAGC
CGGCGGCTCTTTCTGCCTGGAGCCACCGGGCTTGAGGCGCAGTCTGGATGAGGACGAGCCGCCG
CCCTCGCCACTCGCTCGGTATCGGCCCCTGCACAACGCCGCCTCGCATGAGGGCCTGGCTGCCA
CCTCCGGCTCGCCACCGCGCTCCGCACCCTCCTCCGACAGCTCCCCCAGCTTCGTGCGTCGCTA
CCCTCGAGCAGAGCCGCACAGCGAAGACGACAGCCGGGATGCCAGTCCCCCTGAGCCTGCCAGC
CCCACCATCGGCTTAGATAAGAAGACTCGGAGAAAGTTCCTGGACCTGGGGGTCACTCTCCGCC
GAGCATCTACCAGCAAGAGCCGGAAGGAGAAGGGTAGCAACCGCCTGTCCATGGGCAGCAGGGA
GTCTGTAGAAGGCTCTGGAAGGACAGGGGGCTCTCCATTCCTGCCCTTTTCCTGGTTCACAGAC
AGCGGCAAGGGCTCTGCTTCCTCGGGGAGCACCACCTCTCCAACCTGTTCCCCCAAACATGAGG
GCTTCAGCCCCAAGAAGTCAGCTTCCCAGGAATCTACCCTGAGCGATGACTCCACACCTCCCAG
CAGCAGCCCCAAGATCCCCGGTGACCCTCGACAGGAGACCAAATGCTCCTATCCCTACCATACG
TTGTCCCAGTCCTCAGATGAGTTTCTGGATGAGTCCCTCCCTGCTGTAGAACACTGGACCAGCC
AGCAGGTGGGTCAGTGGCTGCACAGCCTCAACCTGGAACAGTATGCCGCTGAGTTTGCTGCCCG
GCAGGTGGATGGGCCGCAGCTCCTGCAGCTGGATGGAAGCAAACTGAAGAGCCTGGGGCTTAGC
AATTCGCATGACCGGGCACTGGTGAAGCGGAAGTTGAAGGAGCTGGCAGCGGCTGCTGAGAAGG
AACGGAAGGCGCAGGAGAAGACCGCACGGCAGCGAGAGAAGCTGCGGCGCCGCGAGCATGAGGC
CAAGAAGAGCTAGGAATGGCTGGCGGGGCTGGCACCCCGGCACACTTGCAGCCACCTGCATGGG
CCTCACCAGGAAGGCAGGGTCTAGGCACCAGGTTCTTGGAGCACATGGCCCCCTCTCACCCTGT
TTGGACTGAGTCCTCTGGAGGGAGACCCCAGGGGGAGGGCCCAGTAATAAACCCAATTTCGAGG
ACTTGTTTGGCGCAGGCTTCCAGGGGGAAGCAGGTGGCAGATGAAGAGGGCAGAGGCCAGGAAT
GCAGCAAACGTGGAGCCCAGAGGAGCCTGGTTCAGGCTGAACCACCGCCCTCTGACTAGAGTGG
TACTGAGCAGGAAGTGATCTAGCTGGAGAGGCCCTACCATGGCCAGGATTCCTAGGCTTAGAGA
ATAGCCTGGGCGACCTGACTGGAGACAGGAGATAGCTGTGTCTCCTCAGCTCTTGAAGGTGGCT
GTGTGGTGGGAGAAAATTCTCCCCAGAAAGGCCAGTGGGCACTGCCAGTAGCACTGTGAGTGGA
TTCCCAGACACCTCCTCAGAGGAGAGAAAAGTGAGCAGGGAAGGTTAAACTGGCCTCTGTAAGG
ACTGCAAAGGGGAGAAGGGGGAGCATTTTCATATTCATATATTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCCTCCCTCCCTCTGCCCCTCCCTCCCCT
TCACTACCCTGCAGGTTCACACAGATCTGCTCCTCTCCCACTGGGCCAGGAGTGGGTCTTTGAC
CCTTTCACAAAGCTAGAATATACTTCTTCAGAAAGTACCTGAGCCATCTTTGAGGGCAGGAAAA
ATTGGGAGCTGTTGGGGACATAGGACATTCCCCACTAGTGCCTAGATGATGAAGAGGCATGATC
TAAGGATGGTCTTTAGGCTGCCAGATTTAAAGGGTCTGTTGGCTTTCCAGGTGCCTCAGTAGGC
CTACAGTGGACATACTGCTGGCTTAGGTTTGCTAGGCTACAGAGGGGGACTGGGCCAGTCCTGG
ATGGGACTGGCACGTGTCCTTTGTAGGATGTGTTCAGAGATAAGAGGGTCCAGGTGTCATGCTG
ACCCAGCTTCTTGGGTGCTGGTCAGTTACTACTGGGCCCAGGTTTCTGATGAGAAACCCCCACC
CCTCCCAGTTTCCTGGAGGGGTGGACAGGACCTGCATGCTAACTCCCTCTCTCCTGCCTGGGAA
AATGGCTGAAGGCCAGGGCCCTGTGTTTGGGCTCAGTCATCTGCACTGGGAGTGGGGCCTCAGA
GGGAAACTAAGGTATAGGGGCATTGGTACTTCCTAGACTGGGTGGGGAGGGTGGAGGCCCGACT
GTCCCTGAAGCCGTCAGGAGCCAAGTGTGCCCACCTGCATGTGAAGGGGGAAGATGGTTATCAA
CTTCTTTCAATAAATACTTACCACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039085587 ⟹ XP_038941515

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	79,957,111 - 79,972,347 (+)	NCBI

RefSeq Acc Id:

XM_039085588 ⟹ XP_038941516

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	79,957,112 - 79,972,347 (+)	NCBI

RefSeq Acc Id:

XM_039085589 ⟹ XP_038941517

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	10	79,957,117 - 79,972,347 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001020137	(Get FASTA)	NCBI Sequence Viewer
	XP_038941515	(Get FASTA)	NCBI Sequence Viewer
	XP_038941516	(Get FASTA)	NCBI Sequence Viewer
	XP_038941517	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH91329	(Get FASTA)	NCBI Sequence Viewer
	Q5BJU3	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001020137 ⟸ NM_001024966

- UniProtKB:

Q5BJU3 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MASSKLREPVDEVFDLDLAVPETTRLDSSLHKARAQLLVKGRRHRPSRSRLRDSTSSAEDGEGS
DGPGGKVTDGCGSPLHRLRSPLHSGPGSPAGGSFCLEPPGLRRSLDEDEPPPSPLARYRPLHNA
ASHEGLAATSGSPPRSAPSSDSSPSFVRRYPRAEPHSEDDSRDASPPEPASPTIGLDKKTRRKF
LDLGVTLRRASTSKSRKEKGSNRLSMGSRESVEGSGRTGGSPFLPFSWFTDSGKGSASSGSTTS
PTCSPKHEGFSPKKSASQESTLSDDSTPPSSSPKIPGDPRQETKCSYPYHTLSQSSDEFLDESL
PAVEHWTSQQVGQWLHSLNLEQYAAEFAARQVDGPQLLQLDGSKLKSLGLSNSHDRALVKRKLK
ELAAAAEKERKAQEKTARQREKLRRREHEAKKS

hide sequence

RefSeq Acc Id:

ENSRNOP00000005519 ⟸ ENSRNOT00000005519

RefSeq Acc Id:	XP_038941515 ⟸ XM_039085587
- Peptide Label:	isoform X1
- UniProtKB:	F1LN57 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038941516 ⟸ XM_039085588
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038941517 ⟸ XM_039085589
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSRNOP00000090621 ⟸ ENSRNOT00000100588

Protein Domains

SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BJU3-F1-model_v2	AlphaFold	Q5BJU3	1-417	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306138	AgrOrtholog
BioCyc Gene	G2FUF-23571	BioCyc
Ensembl Genes	ENSRNOG00000004155	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000005519	ENTREZGENE
	ENSRNOP00000005519.8	UniProtKB/TrEMBL
	ENSRNOP00000090621	ENTREZGENE
	ENSRNOP00000090621.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000005519	ENTREZGENE
	ENSRNOT00000005519.8	UniProtKB/TrEMBL
	ENSRNOT00000100588	ENTREZGENE
	ENSRNOT00000100588.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7313977	IMAGE-MGC_LOAD
InterPro	Neurabin-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM/pointed_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:287637	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:109312	IMAGE-MGC_LOAD
NCBI Gene	287637	ENTREZGENE
PANTHER	PTHR16154	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SPINOPHILIN, ISOFORM J	UniProtKB/TrEMBL
	STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 14	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	SAM_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Samd14	PhenoGen
PROSITE	SAM_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	SAM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF47769	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I6AB96_RAT	UniProtKB/TrEMBL
	F1LN57	ENTREZGENE, UniProtKB/TrEMBL
	Q5BJU3	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Samd14	sterile alpha motif domain containing 14	RGD1306138	similar to cDNA sequence BC034054	Symbol and Name updated	1299863	APPROVED
2005-12-06	RGD1306138	similar to cDNA sequence BC034054	RGD1306138_predicted	similar to cDNA sequence BC034054 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1306138_predicted	similar to cDNA sequence BC034054 (predicted)	LOC287637_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC287637_predicted	similar to cDNA sequence BC034054 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar