Sema3g (semaphorin 3G) - Rat Genome Database

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Gene: Sema3g (semaphorin 3G) Rattus norvegicus
Analyze
Symbol: Sema3g
Name: semaphorin 3G
RGD ID: 1306079
Description: Predicted to enable chemorepellent activity; neuropilin binding activity; and semaphorin receptor binding activity. Predicted to be involved in several processes, including negative regulation of axon extension; neural crest cell migration; and semaphorin-plexin signaling pathway. Predicted to be located in extracellular region. Predicted to be active in plasma membrane. Orthologous to human SEMA3G (semaphorin 3G); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CSG53; LOC290562; RGD1306079; sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G; semaphorin-3G; similar to semaphorin sem2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,420,025 - 6,431,655 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl166,420,012 - 6,432,553 (+)EnsemblGRCr8
mRatBN7.2166,413,589 - 6,425,221 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,413,589 - 6,425,221 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx166,425,837 - 6,437,406 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,570,735 - 7,582,302 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,432,899 - 6,444,592 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,303,582 - 7,315,214 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,303,578 - 7,315,390 (+)Ensemblrn6Rnor6.0
Rnor_5.0167,231,864 - 7,243,496 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4166,651,366 - 6,662,999 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera168,763,787 - 8,775,420 (-)NCBICelera
RGSC_v3.1166,651,400 - 6,661,751 (+)NCBI
Cytogenetic Map16p16NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
acrylamide  (EXP,ISO)
actinomycin D  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
benzo[e]pyrene  (ISO)
Benzo[k]fluoranthene  (ISO)
bisphenol A  (EXP,ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
ciglitazone  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dibenz[a,h]anthracene  (ISO)
dicrotophos  (ISO)
dimethylselenide  (ISO)
dorsomorphin  (ISO)
fenvalerate  (EXP)
gamma-hexachlorocyclohexane  (ISO)
gentamycin  (EXP)
indometacin  (ISO)
inulin  (ISO)
isoprenaline  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
methapyrilene  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
monobenzyl phthalate  (ISO)
Monobutylphthalate  (ISO)
monoethyl phthalate  (ISO)
nickel atom  (ISO)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
ozone  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenylmercury acetate  (ISO)
quercetin  (ISO)
reactive oxygen species  (ISO)
rotenone  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
S-nitrosoglutathione  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
toluene  (EXP)
trichloroethene  (EXP)
triclosan  (ISO)
trimellitic anhydride  (ISO)
triptonide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16098142   PMID:19199708  


Genomics

Comparative Map Data
Sema3g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8166,420,025 - 6,431,655 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl166,420,012 - 6,432,553 (+)EnsemblGRCr8
mRatBN7.2166,413,589 - 6,425,221 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl166,413,589 - 6,425,221 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx166,425,837 - 6,437,406 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0167,570,735 - 7,582,302 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0166,432,899 - 6,444,592 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0167,303,582 - 7,315,214 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,303,578 - 7,315,390 (+)Ensemblrn6Rnor6.0
Rnor_5.0167,231,864 - 7,243,496 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4166,651,366 - 6,662,999 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera168,763,787 - 8,775,420 (-)NCBICelera
RGSC_v3.1166,651,400 - 6,661,751 (+)NCBI
Cytogenetic Map16p16NCBI
SEMA3G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38352,433,035 - 52,445,103 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl352,433,035 - 52,445,103 (-)Ensemblhg38GRCh38
GRCh37352,467,051 - 52,479,119 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36352,442,308 - 52,454,083 (-)NCBIBuild 36Build 36hg18NCBI36
Celera352,446,585 - 52,458,288 (-)NCBICelera
Cytogenetic Map3p21.1NCBI
HuRef352,529,926 - 52,541,701 (-)NCBIHuRef
CHM1_1352,419,717 - 52,431,420 (-)NCBICHM1_1
T2T-CHM13v2.0352,466,008 - 52,478,004 (-)NCBIT2T-CHM13v2.0
Sema3g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391430,939,830 - 30,952,309 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1430,939,817 - 30,952,309 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381431,217,873 - 31,230,352 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1431,217,860 - 31,230,352 (+)Ensemblmm10GRCm38
MGSCv371432,031,059 - 32,042,697 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361430,046,882 - 30,058,520 (+)NCBIMGSCv36mm8
Celera1427,476,482 - 27,488,116 (+)NCBICelera
Cytogenetic Map14BNCBI
cM Map1419.09NCBI
Sema3g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554302,422,934 - 2,433,001 (-)Ensembl
ChiLan1.0NW_0049554302,409,847 - 2,433,001 (-)NCBIChiLan1.0ChiLan1.0
SEMA3G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2252,428,569 - 52,440,209 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1352,433,341 - 52,444,982 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0352,375,215 - 52,387,115 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,603,867 - 53,615,739 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,603,867 - 53,615,739 (-)EnsemblpanPan2panpan1.1
SEMA3G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,322,531 - 37,334,333 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,322,565 - 37,332,818 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2037,304,004 - 37,315,800 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02037,672,570 - 37,684,360 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2037,672,563 - 37,683,348 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,036,521 - 37,048,318 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,445,180 - 37,456,976 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02037,729,778 - 37,745,527 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Sema3g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118170,133,608 - 170,146,054 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364733,271,904 - 3,284,735 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364733,272,213 - 3,284,601 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEMA3G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1334,574,200 - 34,585,660 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11334,574,014 - 34,585,686 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,787,753 - 37,799,424 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SEMA3G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,798,635 - 13,813,779 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,798,366 - 13,810,183 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666041153,089,645 - 153,101,373 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sema3g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248224,773,276 - 4,784,850 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248224,773,479 - 4,784,578 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Sema3g
41 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:186
Count of miRNA genes:126
Interacting mature miRNAs:151
Transcripts:ENSRNOT00000025656
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
1357403Slep4Serum leptin concentration QTL 43.91blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1619639137Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
631830Alc7Alcohol consumption QTL 72.9consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16126727669Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)longest distance run on treadmill (CMO:0001406)1638024580345693Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
1600369Hcas8Hepatocarcinoma susceptibility QTL 8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)16122477621Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
737825Alc13Alcohol consumption QTL 134.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760916039848Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
1300133Rf24Renal function QTL 243.64blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)16338015021361552Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
634355Rends4Renal damage susceptibility QTL 40.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)16126727669Rat
61372Bp40Blood pressure QTL 402.2blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)16422773017696785Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2301406Kidm39Kidney mass QTL 390.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)16285170915884239Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat

Markers in Region
RH133982  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2166,424,191 - 6,424,384 (+)MAPPERmRatBN7.2
Rnor_6.0167,314,185 - 7,314,377NCBIRnor6.0
Rnor_5.0167,242,467 - 7,242,659UniSTSRnor5.0
RGSC_v3.4166,661,970 - 6,662,162UniSTSRGSC3.4
Celera168,764,624 - 8,764,816UniSTS
RH 3.4 Map1647.8UniSTS
Cytogenetic Map16p16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 355 192 11 144 80 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000025656   ⟹   ENSRNOP00000025656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,420,012 - 6,432,553 (+)Ensembl
mRatBN7.2 Ensembl166,413,589 - 6,425,221 (+)Ensembl
Rnor_6.0 Ensembl167,303,578 - 7,315,390 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000139935   ⟹   ENSRNOP00000099979
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl166,420,012 - 6,431,514 (+)Ensembl
RefSeq Acc Id: NM_001100882   ⟹   NP_001094352
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8166,420,025 - 6,431,655 (+)NCBI
mRatBN7.2166,413,589 - 6,425,221 (+)NCBI
Rnor_6.0167,303,582 - 7,315,214 (+)NCBI
Rnor_5.0167,231,864 - 7,243,496 (+)NCBI
RGSC_v3.4166,651,366 - 6,662,999 (+)RGD
Celera168,763,787 - 8,775,420 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001094352 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAD91019 (Get FASTA)   NCBI Sequence Viewer  
  EDL88959 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000025656
  ENSRNOP00000025656.4
RefSeq Acc Id: NP_001094352   ⟸   NM_001100882
- Peptide Label: precursor
- UniProtKB: F1LNH0 (UniProtKB/TrEMBL),   A6KG02 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000025656   ⟸   ENSRNOT00000025656
Ensembl Acc Id: ENSRNOP00000099979   ⟸   ENSRNOT00000139935
Protein Domains
Ig-like   Immunoglobulin-like beta-sandwich   Sema

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LNH0-F1-model_v2 AlphaFold F1LNH0 1-780 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699927
Promoter ID:EPDNEW_R10451
Type:single initiation site
Name:Sema3g_1
Description:semaphorin 3G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0167,303,567 - 7,303,627EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306079 AgrOrtholog
BioCyc Gene G2FUF-12156 BioCyc
Ensembl Genes ENSRNOG00000018952 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000025656 ENTREZGENE
  ENSRNOT00000025656.7 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/TrEMBL
  ligand-binding face of the semaphorins, domain 2 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
  Plexin-like_fold UniProtKB/TrEMBL
  Semap_dom_sf UniProtKB/TrEMBL
  Semaphorin UniProtKB/TrEMBL
  Semaphorin/CD100_Ag UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom UniProtKB/TrEMBL
KEGG Report rno:290562 UniProtKB/TrEMBL
NCBI Gene 290562 ENTREZGENE
PANTHER PTHR11036 UniProtKB/TrEMBL
  SEMAPHORIN-3G UniProtKB/TrEMBL
Pfam PF00047 UniProtKB/TrEMBL
  Sema UniProtKB/TrEMBL
PhenoGen Sema3g PhenoGen
PROSITE IG_LIKE UniProtKB/TrEMBL
  SEMA UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018952 RatGTEx
SMART PSI UniProtKB/TrEMBL
  Sema UniProtKB/TrEMBL
Superfamily-SCOP Plexin repeat UniProtKB/TrEMBL
  Sema UniProtKB/TrEMBL
  SSF48726 UniProtKB/TrEMBL
UniProt A6KG02 ENTREZGENE, UniProtKB/TrEMBL
  F1LNH0 ENTREZGENE, UniProtKB/TrEMBL
  Q5CCT7_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-21 Sema3g  semaphorin 3G  Sema3g  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Sema3g  sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G  RGD1306079  similar to semaphorin sem2  Symbol and Name updated 1299863 APPROVED
2005-12-06 RGD1306079  similar to semaphorin sem2  RGD1306079_predicted  similar to semaphorin sem2 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1306079_predicted  similar to semaphorin sem2 (predicted)  LOC290562_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC290562_predicted  similar to semaphorin sem2 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL