Txnl4b (thioredoxin-like 4B) - Rat Genome Database

Name: Txnl4b
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Txnl4b (thioredoxin-like 4B) Rattus norvegicus

Analyze

Symbol:

Txnl4b

Name:

thioredoxin-like 4B

RGD ID:

1305127

Description:

Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of U4/U6 x U5 tri-snRNP complex; U5 snRNP; and spliceosomal complex. Orthologous to human TXNL4B (thioredoxin like 4B); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Dim1-like protein; LOC292008; MGC109322; RGD1305127; similar to hypothetical protein FLJ20511; thioredoxin-like protein 4B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TXNL4B (thioredoxin like 4B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Txnl4b (thioredoxin-like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Txnl4b (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TXNL4B (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TXNL4B (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Txnl4b (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TXNL4B (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TXNL4B (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Txnl4b (thioredoxin like 4B)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TXNL4A (thioredoxin like 4A)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	TXNL4B (thioredoxin like 4B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Txnl4b (thioredoxin-like 4B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	txnl4b (thioredoxin-like 4B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	DIB1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Dim1	Alliance	DIOPT (InParanoid\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y54G2A.75	Alliance	DIOPT (InParanoid\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	txnl4b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	54,439,686 - 54,449,777 (+)	NCBI		GRCr8
mRatBN7.2	19	37,530,157 - 37,539,827 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	37,530,152 - 37,538,521 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	44,346,085 - 44,351,778 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	44,999,413 - 45,005,106 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	47,309,120 - 47,314,813 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	42,101,081 - 42,110,223 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	42,101,902 - 42,107,601 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	52,926,210 - 52,935,397 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	39,436,220 - 39,441,919 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	39,441,100 - 39,446,800 (+)	NCBI
Celera	19	36,937,910 - 36,943,603 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 6 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

amitrole (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

benzophenone (EXP)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

cypermethrin (ISO)

Dibutyl phosphate (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

emodin (ISO)

endosulfan (EXP)

ethyl methanesulfonate (ISO)

fenthion (ISO)

flutamide (EXP)

formaldehyde (ISO)

furan (EXP)

genistein (EXP)

glyphosate (ISO)

leflunomide (ISO)

methapyrilene (EXP)

methidathion (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

methylisothiazolinone (ISO)

methylmercury chloride (ISO)

monuron (EXP)

nickel atom (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

picoxystrobin (ISO)

potassium chromate (ISO)

rotenone (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

T-2 toxin (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

thiram (ISO)

trichloroethene (EXP)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA splicing, via spliceosome (IEA)

Cellular Component

cytosol (IEA,ISO)

nucleoplasm (IEA,ISO)

spliceosomal complex (IBA)

U4/U6 x U5 tri-snRNP complex (IBA)

U5 snRNP (IBA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.

Genomics

Comparative Map Data

Txnl4b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	54,439,686 - 54,449,777 (+)	NCBI		GRCr8
mRatBN7.2	19	37,530,157 - 37,539,827 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	37,530,152 - 37,538,521 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	44,346,085 - 44,351,778 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	44,999,413 - 45,005,106 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	47,309,120 - 47,314,813 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	42,101,081 - 42,110,223 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	42,101,902 - 42,107,601 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	52,926,210 - 52,935,397 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	39,436,220 - 39,441,919 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	39,441,100 - 39,446,800 (+)	NCBI
Celera	19	36,937,910 - 36,943,603 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

TXNL4B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	72,084,857 - 72,094,378 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	72,044,289 - 72,094,431 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	72,118,756 - 72,128,277 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	70,676,257 - 70,685,015 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	70,676,258 - 70,685,015	NCBI
Celera	16	56,432,875 - 56,442,336 (-)	NCBI		Celera
Cytogenetic Map	16	q22.2	NCBI
HuRef	16	57,885,588 - 57,895,049 (-)	NCBI		HuRef
CHM1_1	16	73,532,104 - 73,541,565 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	77,901,171 - 77,912,511 (-)	NCBI		T2T-CHM13v2.0

Txnl4b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	110,292,524 - 110,300,683 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	110,292,524 - 110,300,683 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	109,565,892 - 109,574,051 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	109,565,892 - 109,574,051 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	112,089,886 - 112,097,951 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	112,455,134 - 112,463,168 (+)	NCBI		MGSCv36	mm8
Celera	8	113,791,263 - 113,799,328 (+)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	57.1	NCBI

Txnl4b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	4,744,620 - 4,752,737 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	4,744,620 - 4,752,737 (-)	NCBI	ChiLan1.0	ChiLan1.0

TXNL4B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	82,035,403 - 82,125,155 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	87,962,655 - 88,064,689 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	52,890,600 - 52,988,559 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	71,884,864 - 71,955,735 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	71,946,172 - 71,954,951 (-)	Ensembl	panpan1.1		panPan2

TXNL4B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	77,765,461 - 77,810,729 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	77,803,575 - 77,810,637 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	77,727,180 - 77,772,583 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	78,204,805 - 78,250,237 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	78,215,059 - 78,250,107 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	78,024,865 - 78,070,379 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	77,847,747 - 77,893,148 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	78,346,890 - 78,392,513 (-)	NCBI		UU_Cfam_GSD_1.0

Txnl4b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	37,750,295 - 37,758,471 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	21,830,610 - 21,839,578 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	21,830,630 - 21,838,819 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TXNL4B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	14,985,474 - 14,998,017 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	14,985,063 - 14,998,077 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	14,647,741 - 14,654,710 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TXNL4B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	55,180,335 - 55,244,607 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	55,235,939 - 55,243,848 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	17,988,279 - 18,032,726 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Txnl4b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	14,293,179 - 14,301,668 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	14,293,415 - 14,301,700 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Txnl4b
27 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	417
Count of miRNA genes:	230
Interacting mature miRNAs:	264
Transcripts:	ENSRNOT00000034676
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61350	Bp32	Blood pressure QTL 32		0.012	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	19	20483575	57337602	Rat
61447	Tcas1	Tongue tumor susceptibility QTL 1	6.08		tongue integrity trait (VT:0010553)	squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)	19	2316121	47316121	Rat
724546	Kidm3	Kidney mass QTL 3	3.1		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	19	29322490	57337602	Rat
1358200	Insglur2	Insulin/glucose ratio QTL 2	4.1		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	19	33838214	55283146	Rat
7411549	Bw130	Body weight QTL 130	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	15455860	57337602	Rat
724518	Uae19	Urinary albumin excretion QTL 19	5.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	7457249	42983518	Rat
1331737	Uae29	Urinary albumin excretion QTL 29	5.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	4096155	55283277	Rat
2298478	Eau8	Experimental allergic uveoretinitis QTL 8		0.0163	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	19	17154433	57337602	Rat
8694186	Bw152	Body weight QTL 152	3.34	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	19	569374	45569374	Rat
61423	Cia14	Collagen induced arthritis QTL 14	3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	19	10827970	43544039	Rat
1578764	Stresp19	Stress response QTL 19	3.6	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	19	15630201	57337602	Rat
1331788	Rf45	Renal function QTL 45	2.818		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	19	15605023	46559041	Rat
1354607	Gmadr1	Adrenal mass QTL 1	5.83		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	19	27530207	37947399	Rat
2317848	Alcrsp21	Alcohol response QTL 21	1.899999976158142	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	19	3204777	48204777	Rat
1354600	Salc2	Saline consumption QTL 2	9.91	0.001	drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	19	27530207	37947399	Rat
1549835	Tcas7	Tongue tumor susceptibility QTL 7		0.001	tongue integrity trait (VT:0010553)	squamous cell carcinoma of the head and neck tumor number (CMO:0001876)	19	24817978	39654489	Rat
9589102	Slep13	Serum leptin concentration QTL 13	4.63	0.001	blood leptin amount (VT:0005667)	plasma leptin level (CMO:0000781)	19	569374	45569374	Rat
7247442	Uae39	Urinary albumin excretion QTL 39			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	19	2187927	46708701	Rat
724566	Uae12	Urinary albumin excretion QTL 12	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	19	2187927	56457239	Rat
1354633	Bw28	Body weight QTL 28	6.04		body mass (VT:0001259)	body weight (CMO:0000012)	19	27530207	37947399	Rat
724565	Tcas5	Tongue tumor susceptibility QTL 5	10.04		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	19	9977753	39654489	Rat

Markers in Region

RH132749

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	19	37,538,282 - 37,538,480 (-)	MAPPER	mRatBN7.2
Rnor_6.0	19	42,101,951 - 42,102,148	NCBI	Rnor6.0
Rnor_5.0	19	52,927,080 - 52,927,277	UniSTS	Rnor5.0
RGSC_v3.4	19	39,441,673 - 39,441,870	UniSTS	RGSC3.4
Celera	19	36,943,357 - 36,943,554	UniSTS
RH 3.4 Map	19	292.5	UniSTS
Cytogenetic Map	19	q12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006255579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_361828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC111713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC089962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000034676 ⟹ ENSRNOP00000030193

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	19	37,530,152 - 37,538,521 (+)	Ensembl
Rnor_6.0 Ensembl	19	42,101,902 - 42,107,601 (-)	Ensembl

RefSeq Acc Id:

NM_001013891 ⟹ NP_001013913

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	54,442,355 - 54,448,054 (+)	NCBI
mRatBN7.2	19	37,532,830 - 37,538,529 (+)	NCBI
Rnor_6.0	19	42,101,902 - 42,107,601 (-)	NCBI
Rnor_5.0	19	52,926,210 - 52,935,397 (-)	NCBI
RGSC_v3.4	19	39,436,220 - 39,441,919 (+)	RGD
Celera	19	36,937,910 - 36,943,603 (+)	RGD

Sequence:

show sequence

CGCACTTCATCTAGGCAGCCTTTAGACACTGCAGAATTGACAGTGCCAACTAGCATTGGACTCT
TTCAAGATGAGCTTCCTCTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAA
GCACTGCGGAGAAGGTCTTGGTTCTCAGGTTTGGGAGGGATGAGGATCCCGTCTGTCTGCAGCT
GGATGATATTCTTTCAAAGACTTCAGCTGACCTGAGTAAAATGGCTACCATTTACCTGGTGGAC
GTGGACCAAACTCCAGTTTATACACAGTATTTTGACATCAGTTATATTCCCTCTACCGTATTTT
TCTTCAATGGGCAGCACATGAAAGTGGATTATGGGTCGCCGGATCACACTAAATTCGTAGGAAG
CTTCAAAACCAAACAAGACTTCATAGATTTGATTGAAGTCATCTACCGGGGAGCTATGCGAGGA
AAACTTATTGTTCAAAGTCCTATTGACCCCAAGAACATACCCAAATACGACCTCCTCTATCAAG
ACATTTAGCACTCGCTGCTGTTGGAGAGAAGAGAGGCACAGGCTGAAGCAGAACCTGAACTCAG
AGAGCCTGTGGTCTGGAGTCCCTCAGAGACATGCTCACTGCCTGAGCAAAGAGGTTTCATAGGT
CTGTAATCAACGGCCCCTCTGCAGAAGCCCCAGTGCTCCCAGAATGGAGATGCCTGAGTGTCCA
TTCTCTGAGAGCCTCAGAGCAGTGAGCGAGTGACAGGTGGCATTGTAACGTCCCTTTATCTTGA
CTTTCTTTCCCCCTTAAGGTCAAGCCTCCTCCTAGGCGCTGTGAGAACAGTTTGGCCATGTTTG
TGCACACGGGCTCTCCTGGGCCTCCATTTACTCATTTACTTGCCCCTCCTATCCCAGCTTCTCT
TGAAATAGTTAATACTTAGATGCAGGGGAGTTCATTTGTTTCCTCACAGACTGAAAACAGAACC
CGTCCACATATTTACAGCTGGCAGGTCGTTAATTGACGAGAGAAAAATGTGGCTCTCCACCACC
CAGCACAGTTTGAGCTAAATAACAAGTTAACTGCCCTTGGGAAGTAAGGGACAGGGCTCCCCAG
AAAGCAGTGCCACCACCCCTTATTTCAAGGACTCAAGGCCAAAAGGGTATCAGATTGTTAAGGG
AGCAATGCCTTGAGGGGTTTGCGATTCCAAGGGCTTTTTCAGAATGACCCAACCTCAGGAAACT
TGTGTTTCTCGTAAGCCTGTGGTAGTAGTTGTCCCTGACACTGGAGTGAGAGAGCAGGGGCAGA
GCTGGAGGGCTATGGCCAGGAAGCTTGTGACCTGCTGGGCAGCAAGGGACTTGTTGACAGCAGA
GGCCCAGGTGTGTGGGAGGCAACACTGTCACCACAGGGCCAACCCTGGCATTAGCTGCTTACTA
CTAAGCTTGTCCTTTAGAGAAAAGTGAAACAGGACCTGGTTCTGACAGATGTGGCACAGAAAGA
AGGTTGTTTGGGTTTTCTGAGTCCTCTGCTTAAAGCTGAGCAATGCTTCAGGGAGGTGCAGACA
GCGTTTTCCCACCACCTCCTTAGGATGCCTGGGGCTGTGGCAGCCACCCTGGACACGTGGGATG
AAGAGTTAGAGATTGTAAGAGTCAGATCCCTGATGAAGTCCTGGGTGAACGATAAACTCTCCTC
CAGTCCCTATGATGGAATAAAAGGTCTTTGTCCAACTGACAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006255579 ⟹ XP_006255641

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	54,439,697 - 54,448,049 (+)	NCBI
mRatBN7.2	19	37,530,157 - 37,538,529 (+)	NCBI
Rnor_6.0	19	42,101,902 - 42,110,223 (-)	NCBI
Rnor_5.0	19	52,926,210 - 52,935,397 (-)	NCBI

Sequence:

show sequence

TTTGACTGGGACGCGCGGTGGCACGTTCTTTTTCTACGTCCGTGTTTCTCACTTCCGCTTGTGA
GGGATTCAGGTCGGAGGAAGCATTTCTAAGGAACAAGCCAGGACTCACGCACTTCATCTAGGCA
GCCTTTAGACACTGCAGAATTGACAGTGCCAACTAGCATTGGACTCTTTCAAGATGAGCTTCCT
CTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTC
TTGGTTCTCAGGTTTGGGAGGGATGAGGATCCCGTCTGTCTGCAGCTGGATGATATTCTTTCAA
AGACTTCAGCTGACCTGAGTAAAATGGCTACCATTTACCTGGTGGACGTGGACCAAACTCCAGT
TTATACACAGTATTTTGACATCAGTTATATTCCCTCTACCGTATTTTTCTTCAATGGGCAGCAC
ATGAAAGTGGATTATGGGTCGCCGGATCACACTAAATTCGTAGGAAGCTTCAAAACCAAACAAG
ACTTCATAGATTTGATTGAAGTCATCTACCGGGGAGCTATGCGAGGAAAACTTATTGTTCAAAG
TCCTATTGACCCCAAGAACATACCCAAATACGACCTCCTCTATCAAGACATTTAGCACTCGCTG
CTGTTGGAGAGAAGAGAGGCACAGGCTGAAGCAGAACCTGAACTCAGAGAGCCTGTGGTCTGGA
GTCCCTCAGAGACATGCTCACTGCCTGAGCAAAGAGGTTTCATAGGTCTGTAATCAACGGCCCC
TCTGCAGAAGCCCCAGTGCTCCCAGAATGGAGATGCCTGAGTGTCCATTCTCTGAGAGCCTCAG
AGCAGTGAGCGAGTGACAGGTGGCATTGTAACGTCCCTTTATCTTGACTTTCTTTCCCCCTTAA
GGTCAAGCCTCCTCCTAGGCGCTGTGAGAACAGTTTGGCCATGTTTGTGCACACGGGCTCTCCT
GGGCCTCCATTTACTCATTTACTTGCCCCTCCTATCCCAGCTTCTCTTGAAATAGTTAATACTT
AGATGCAGGGGAGTTCATTTGTTTCCTCACAGACTGAAAACAGAACCCGTCCACATATTTACAG
CTGGCAGGTCGTTAATTGACGAGAGAAAAATGTGGCTCTCCACCACCCAGCACAGTTTGAGCTA
AATAACAAGTTAACTGCCCTTGGGAAGTAAGGGACAGGGCTCCCCAGAAAGCAGTGCCACCACC
CCTTATTTCAAGGACTCAAGGCCAAAAGGGTATCAGATTGTTAAGGGAGCAATGCCTTGAGGGG
TTTGCGATTCCAAGGGCTTTTTCAGAATGACCCAACCTCAGGAAACTTGTGTTTCTCGTAAGCC
TGTGGTAGTAGTTGTCCCTGACACTGGAGTGAGAGAGCAGGGGCAGAGCTGGAGGGCTATGGCC
AGGAAGCTTGTGACCTGCTGGGCAGCAAGGGACTTGTTGACAGCAGAGGCCCAGGTGTGTGGGA
GGCAACACTGTCACCACAGGGCCAACCCTGGCATTAGCTGCTTACTACTAAGCTTGTCCTTTAG
AGAAAAGTGAAACAGGACCTGGTTCTGACAGATGTGGCACAGAAAGAAGGTTGTTTGGGTTTTC
TGAGTCCTCTGCTTAAAGCTGAGCAATGCTTCAGGGAGGTGCAGACAGCGTTTTCCCACCACCT
CCTTAGGATGCCTGGGGCTGTGGCAGCCACCCTGGACACGTGGGATGAAGAGTTAGAGATTGTA
AGAGTCAGATCCCTGATGAAGTCCTGGGTGAACGATAAACTCTCCTCCAGTCCCTATGATGGAA
TAAAAGGTCTTTGTCCAACTGAC

hide sequence

RefSeq Acc Id:

XM_017601235 ⟹ XP_017456724

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	54,439,699 - 54,448,049 (+)	NCBI
mRatBN7.2	19	37,530,175 - 37,538,529 (+)	NCBI
Rnor_6.0	19	42,101,903 - 42,110,221 (-)	NCBI

Sequence:

show sequence

TGACTGGGACGCGCGGTGGCACGTTCTTTTTCTACGTCCGTGTTTCTCACTTCCGCTTGTGAGG
GATTCAGGTCGGAGGAAGCATTTCTAAGGAACAAGCCAGCTTTCAAAGACTTCAGCTGACCTGA
GTAAAATGGCTACCATTTACCTGGTGGACGTGGACCAAACTCCAGTTTATACACAGTATTTTGA
CATCAGTTATATTCCCTCTACCGTATTTTTCTTCAATGGGCAGCACATGAAAGTGGATTATGGG
TCGCCGGATCACACTAAATTCGTAGGAAGCTTCAAAACCAAACAAGACTTCATAGATTTGATTG
AAGTCATCTACCGGGGAGCTATGCGAGGAAAACTTATTGTTCAAAGTCCTATTGACCCCAAGAA
CATACCCAAATACGACCTCCTCTATCAAGACATTTAGCACTCGCTGCTGTTGGAGAGAAGAGAG
GCACAGGCTGAAGCAGAACCTGAACTCAGAGAGCCTGTGGTCTGGAGTCCCTCAGAGACATGCT
CACTGCCTGAGCAAAGAGGTTTCATAGGTCTGTAATCAACGGCCCCTCTGCAGAAGCCCCAGTG
CTCCCAGAATGGAGATGCCTGAGTGTCCATTCTCTGAGAGCCTCAGAGCAGTGAGCGAGTGACA
GGTGGCATTGTAACGTCCCTTTATCTTGACTTTCTTTCCCCCTTAAGGTCAAGCCTCCTCCTAG
GCGCTGTGAGAACAGTTTGGCCATGTTTGTGCACACGGGCTCTCCTGGGCCTCCATTTACTCAT
TTACTTGCCCCTCCTATCCCAGCTTCTCTTGAAATAGTTAATACTTAGATGCAGGGGAGTTCAT
TTGTTTCCTCACAGACTGAAAACAGAACCCGTCCACATATTTACAGCTGGCAGGTCGTTAATTG
ACGAGAGAAAAATGTGGCTCTCCACCACCCAGCACAGTTTGAGCTAAATAACAAGTTAACTGCC
CTTGGGAAGTAAGGGACAGGGCTCCCCAGAAAGCAGTGCCACCACCCCTTATTTCAAGGACTCA
AGGCCAAAAGGGTATCAGATTGTTAAGGGAGCAATGCCTTGAGGGGTTTGCGATTCCAAGGGCT
TTTTCAGAATGACCCAACCTCAGGAAACTTGTGTTTCTCGTAAGCCTGTGGTAGTAGTTGTCCC
TGACACTGGAGTGAGAGAGCAGGGGCAGAGCTGGAGGGCTATGGCCAGGAAGCTTGTGACCTGC
TGGGCAGCAAGGGACTTGTTGACAGCAGAGGCCCAGGTGTGTGGGAGGCAACACTGTCACCACA
GGGCCAACCCTGGCATTAGCTGCTTACTACTAAGCTTGTCCTTTAGAGAAAAGTGAAACAGGAC
CTGGTTCTGACAGATGTGGCACAGAAAGAAGGTTGTTTGGGTTTTCTGAGTCCTCTGCTTAAAG
CTGAGCAATGCTTCAGGGAGGTGCAGACAGCGTTTTCCCACCACCTCCTTAGGATGCCTGGGGC
TGTGGCAGCCACCCTGGACACGTGGGATGAAGAGTTAGAGATTGTAAGAGTCAGATCCCTGATG
AAGTCCTGGGTGAACGATAAACTCTCCTCCAGTCCCTATGATGGAATAAAAGGTCTTTGTCCAA
CTGA

hide sequence

RefSeq Acc Id:

XM_063277930 ⟹ XP_063134000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	54,439,892 - 54,448,049 (+)	NCBI

RefSeq Acc Id:

XM_063277931 ⟹ XP_063134001

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	54,442,416 - 54,448,049 (+)	NCBI

RefSeq Acc Id:

XR_361828

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	19	54,439,686 - 54,449,777 (+)	NCBI
mRatBN7.2	19	37,530,162 - 37,539,827 (+)	NCBI
Rnor_6.0	19	42,101,081 - 42,110,223 (-)	NCBI
Rnor_5.0	19	52,926,210 - 52,935,397 (-)	NCBI

Sequence:

show sequence

TTTGACTGGGACGCGCGGTGGCACGTTCTTTTTCTACGTCCGTGTTTCTCACTTCCGCTTGTGA
GGGATTCAGGTCGGAGGAAGCATTTCTAAGGAACAAGCCAGGACTCACGCACTTCATCTAGGCA
GCCTTTAGACACTGCAGAATTGACAGTGCCAACTAGCATTGGACTCTTTCAAGATGAGCTTCCT
CTTGCCCAAACTGACCAGCAAGAAAGAAGTAGACCAGGCGATCAAAAGCACTGCGGAGAAGGTC
TTGGTTCTCAGGTTTGGGAGGGATGAGGATCCCGTCTGTCTGCAGCTGGATGATATTCTTTCAA
AGACTTCAGCTGACCTGAGTAAAATGGCTACCATTTACCTGGTGGACGTGGACCAAACTCCAGT
TTATACACAGTATTTTGACATCAGTTATATTCCCTCTACCGTATTTTTCTTCAATGGGCAGCAC
ATGAAAGTGGATTATGGGTCGCCGGATCACACTAAATTCGTAGGAAGCTTCAAAACCAAACAAG
ACTTCATAGATTTGATTGAAGTCATCTACCGGGGAGCTATGCGAGGAAAACTTATTGTTCAAAG
TCCTATTGACCCCAAGAACATACCCAAATACGACCTCCTCTATCAAGACATTTAGCACTCGCTG
CTGTTGGAGAGAAGAGAGGCACAGGCTGAAGCAGAACCTGAACTCAGAGAGCCTGTGGTCTGGA
GTCCCTCAGAGACATGCTCACTGCCTGAGCAAAGAGGTTTCATAGGTCCTTGTCTCTCTTGATG
TCATAGCTCTGCCCTGGGGAGAGACACCAGTGACTCTGAAGATGCAGAGGTAGGCCATGCGGCC
TGCCTGTAACCCCAGAAAAGGGTGAGATTCTCCACTGTGGAAGAAGAGCCACTGAGGAAGAGAC
CCCAACTCTACCAAACCCCAGAGCATTCCAGCCATGGGACTCTATAGAGTCTCTCGTTTTCATC
CTCCCTCATGGAAGAAGTCGAGGACAGGTAATGACCAGAAAGTTTAAGTTGCTGAGCAAATCTG
GGTTAAGCTGTTGAGAAGACTATTAAGCCACAGCCTGCCTGCATGCACCTGTTTGGGTTTCTGG
CAGACGGAAGCACAAACACAAGAGCCTCTGTCACAACTCTCGTCCCACTCCGAGC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001013913	(Get FASTA)	NCBI Sequence Viewer
	XP_006255641	(Get FASTA)	NCBI Sequence Viewer
	XP_017456724	(Get FASTA)	NCBI Sequence Viewer
	XP_063134000	(Get FASTA)	NCBI Sequence Viewer
	XP_063134001	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH89962	(Get FASTA)	NCBI Sequence Viewer
	EDL92499	(Get FASTA)	NCBI Sequence Viewer
	EDL92500	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000030193.3

RefSeq Acc Id:	NP_001013913 ⟸ NM_001013891
- UniProtKB:	Q5FVI5 (UniProtKB/TrEMBL), F7FL88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSADLSKMATIYLVDVD QTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKL IVQSPIDPKNIPKYDLLYQDI hide sequence

RefSeq Acc Id:	XP_006255641 ⟸ XM_006255579
- Peptide Label:	isoform X1
- UniProtKB:	Q5FVI5 (UniProtKB/TrEMBL), F7FL88 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSADLSKMATIYLVDVD QTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGAMRGKL IVQSPIDPKNIPKYDLLYQDI hide sequence

RefSeq Acc Id:	XP_017456724 ⟸ XM_017601235
- Peptide Label:	isoform X2
- Sequence:	show sequence MATIYLVDVDQTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV IYRGAMRGKLIVQSPIDPKNIPKYDLLYQDI hide sequence

Ensembl Acc Id:

ENSRNOP00000030193 ⟸ ENSRNOT00000034676

RefSeq Acc Id:	XP_063134000 ⟸ XM_063277930
- Peptide Label:	isoform X1
- UniProtKB:	F7FL88 (UniProtKB/TrEMBL), Q5FVI5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063134001 ⟸ XM_063277931
- Peptide Label:	isoform X2

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5FVI5-F1-model_v2	AlphaFold	Q5FVI5	1-149	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305127	AgrOrtholog
BioCyc Gene	G2FUF-5731	BioCyc
Ensembl Genes	ENSRNOG00000021379	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000034676.5	UniProtKB/TrEMBL
Gene3D-CATH	Glutaredoxin	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7314335	IMAGE-MGC_LOAD
InterPro	mRNA_splic_U5	UniProtKB/TrEMBL
	Thioredoxin-like_sf	UniProtKB/TrEMBL
KEGG Report	rno:292008	UniProtKB/TrEMBL
MGC_CLONE	MGC:109322	IMAGE-MGC_LOAD
NCBI Gene	292008	ENTREZGENE
PANTHER	mRNA_splic_U5	UniProtKB/TrEMBL
	THIOREDOXIN-LIKE PROTEIN 4B	UniProtKB/TrEMBL
Pfam	DIM1	UniProtKB/TrEMBL
PhenoGen	Txnl4b	PhenoGen
PIRSF	mRNA_splic_U5	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000021379	RatGTEx
SMART	DIM1	UniProtKB/TrEMBL
Superfamily-SCOP	Thiordxn-like_fd	UniProtKB/TrEMBL
UniProt	A6IZ22_RAT	UniProtKB/TrEMBL
	F7FL88	ENTREZGENE, UniProtKB/TrEMBL
	Q5FVI5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Txnl4b	thioredoxin-like 4B	RGD1305127	similar to hypothetical protein FLJ20511	Symbol and Name updated	1299863	APPROVED
2005-12-06	RGD1305127	similar to hypothetical protein FLJ20511	RGD1305127_predicted	similar to hypothetical protein FLJ20511 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1305127_predicted	similar to hypothetical protein FLJ20511 (predicted)	LOC292008_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC292008_predicted	similar to hypothetical protein FLJ20511 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar