Advanced Search (OLGA)

Gene: Il4i1 (interleukin 4 induced 1) Rattus norvegicus

Analyze

Symbol:

Il4i1

Name:

interleukin 4 induced 1

RGD ID:

1304831

Description:

Predicted to enable L-amino-acid oxidase activity. Predicted to be involved in erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process; negative regulation of T cell mediated immune response to tumor cell; and regulation of lymphocyte activation. Predicted to act upstream of or within aromatic amino acid metabolic process. Predicted to be located in several cellular components, including acrosomal vesicle; immunological synapse; and sperm midpiece. Orthologous to human IL4I1 (interleukin 4 induced 1); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; alpha-Zearalanol; amphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

L-amino-acid oxidase; LOC100360621; LOC308575; rCG53598-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	IL4I1 (interleukin 4 induced 1)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Il4i1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Il4i1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	IL4I1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	IL4I1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Il4i1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	IL4I1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	IL4I1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Il4i1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Il4i1 (interleukin 4 induced 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	IL4I1 (interleukin 4 induced 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Il4i1 (interleukin 4 induced 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Il4i1b (interleukin 4 induced 1B)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	il4i1	Alliance	DIOPT (PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	104,435,540 - 104,461,049 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	104,435,981 - 104,461,053 (+)	Ensembl				GRCr8
mRatBN7.2	1	95,299,457 - 95,324,564 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	95,295,601 - 95,324,562 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	100,811,727 - 100,836,901 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	100,830,064 - 100,836,677 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	101,876,161 - 101,901,569 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	95,308,752 - 95,313,418 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	89,576,933 - 89,586,418 (+)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (ISO)

Inflammation (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO)

4,4'-sulfonyldiphenol (ISO)

4-aminobenzoic acid (ISO)

alpha-Zearalanol (EXP)

amphetamine (EXP)

antirheumatic drug (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

benzoic acid (ISO)

bisphenol A (ISO)

bisphenol F (ISO)

buta-1,3-diene (ISO)

butanal (ISO)

carbon nanotube (ISO)

choline (ISO)

clofibrate (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

ferric oxide (ISO)

folic acid (ISO)

gadodiamide hydrate (ISO)

GSK-J4 (ISO)

L-methionine (ISO)

lipopolysaccharide (ISO)

methapyrilene (ISO)

mono(2-ethylhexyl) phthalate (ISO)

naled (ISO)

naphthalene (ISO)

nickel atom (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (ISO)

pentanal (ISO)

perfluorohexanesulfonic acid (ISO)

PhIP (EXP)

propanal (ISO)

rotenone (ISO)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

succimer (ISO)

tamoxifen (ISO)

tetraphene (ISO)

titanium dioxide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid catabolic process (IBA)

aromatic amino acid metabolic process (ISO)

L-phenylalanine catabolic process (ISO)

L-tryptophan catabolic process (ISO)

L-tryptophan catabolic process to indole-3-acetate (ISO)

L-tyrosine catabolic process (ISO)

negative regulation of T cell activation (ISO)

negative regulation of T cell mediated immune response to tumor cell (ISO)

negative regulation of T cell proliferation (ISO)

positive regulation of regulatory T cell differentiation (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of adaptive immune response (ISO)

regulation of B cell differentiation (ISO)

Cellular Component

acrosomal vesicle (ISO)

extracellular region (IEA,ISO)

immunological synapse (ISO)

lysosome (ISO)

sperm midpiece (ISO)

Molecular Function

L-amino-acid oxidase activity (IBA,IEA,ISO)

oxidoreductase activity (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Canavan disease pathway (ISO)

glycine N-methyltransferase deficiency pathway (ISO)

homocystinuria pathway (ISO)

hypermethioninemia pathway (ISO)

methionine cycle/metabolic pathway (ISO)

methylenetetrahydrofolate reductase deficiency pathway (ISO)

phenylketonuria pathway (ISO)

tyrosinemia type II pathway (ISO)

tyrosinemia type III pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:17356132

Genomics

Comparative Map Data

Il4i1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	104,435,540 - 104,461,049 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	104,435,981 - 104,461,053 (+)	Ensembl				GRCr8
mRatBN7.2	1	95,299,457 - 95,324,564 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	95,295,601 - 95,324,562 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	100,811,727 - 100,836,901 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	100,830,064 - 100,836,677 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	101,876,161 - 101,901,569 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	95,308,752 - 95,313,418 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	89,576,933 - 89,586,418 (+)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

IL4I1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	49,889,654 - 49,929,504 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	49,889,654 - 49,929,539 (-)	Ensembl			hg38	GRCh38
GRCh37	19	50,392,911 - 50,432,761 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	55,084,723 - 55,124,574 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	19	55,084,722 - 55,124,574	NCBI
Celera	19	47,262,414 - 47,302,277 (-)	NCBI		Celera
Cytogenetic Map	19	q13.33	NCBI
HuRef	19	46,769,248 - 46,809,051 (-)	NCBI		HuRef
CHM1_1	19	50,394,747 - 50,434,624 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	52,889,790 - 52,929,639 (-)	NCBI		T2T-CHM13v2.0

Il4i1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	44,485,712 - 44,490,233 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	44,465,811 - 44,490,233 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	44,836,288 - 44,840,809 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	44,816,387 - 44,840,809 (+)	Ensembl			mm10	GRCm38
MGSCv37	7	52,091,658 - 52,096,179 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	44,704,331 - 44,708,851 (+)	NCBI		MGSCv36	mm8
Celera	7	40,286,481 - 40,291,002 (+)	NCBI		Celera
Cytogenetic Map	7	B3	NCBI
cM Map	7	28.93	NCBI

Il4i1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955559	1,034,917 - 1,047,034 (+)	Ensembl
ChiLan1.0	NW_004955559	1,012,634 - 1,047,051 (+)	NCBI	ChiLan1.0	ChiLan1.0

IL4I1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	56,004,316 - 56,044,128 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	57,925,198 - 57,965,639 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	46,902,656 - 46,942,213 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	55,819,075 - 55,858,389 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	55,819,080 - 55,858,389 (-)	Ensembl			panPan2	panpan1.1

IL4I1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	106,636,282 - 106,673,438 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	106,657,477 - 106,673,422 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	106,219,730 - 106,256,886 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	107,157,695 - 107,194,884 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	107,157,643 - 107,194,884 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	106,829,854 - 106,866,989 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	106,472,010 - 106,509,177 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	107,312,300 - 107,349,450 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Il4i1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	22,056,422 - 22,064,145 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936664	3,675,805 - 3,686,262 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936664	3,674,612 - 3,715,036 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IL4I1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	54,906,406 - 54,916,081 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	54,906,401 - 54,945,840 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	50,635,545 - 50,645,336 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IL4I1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	43,046,357 - 43,061,295 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	43,046,379 - 43,057,851 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666073	23,021,650 - 23,036,612 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Il4i1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	4,431,903 - 4,444,651 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624832	4,404,818 - 4,444,551 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Il4i1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	154,702,291 - 154,707,032 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Il4i1
309 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	142
Count of miRNA genes:	62
Interacting mature miRNAs:	66
Transcripts:	ENSRNOT00000027320, ENSRNOT00000056364
Prediction methods:	Microtar, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	87889942	132889942	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1331793	Bp200	Blood pressure QTL 200	3.71601		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	102780511	182384005	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
2300324	Fetw1	Fetal weight QTL 1	12.1	0.005	fetal growth trait (VT:0004201)	fetal body weight (CMO:0002080)	1	92963855	109494029	Rat
1554320	Bmd1	Bone mineral density QTL 1	12.2	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	101228864	146228864	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	87785026	142582336	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	83019780	128019780	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
631519	Pia11	Pristane induced arthritis QTL 11	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	93903998	191260518	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	84107164	115183752	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	91302413	136302413	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
724567	Tcas6	Tongue tumor susceptibility QTL 6	6.85		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	1	102359314	153680016	Rat
724521	Uae1	Urinary albumin excretion QTL 1	3.8	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	1	99645382	182701046	Rat
1358902	Bw47	Body weight QTL 47	1.67		body mass (VT:0001259)	body weight (CMO:0000012)	1	99645382	221502378	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	86622262	131622262	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
731168	Bp154	Blood pressure QTL 154	3.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	103779152	223964440	Rat
631205	Bp196	Blood pressure QTL 196	4	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	98879955	208479939	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)	1	92683681	137683681	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	86993904	131993904	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	87558587	132558587	Rat
1331749	Hrtrt11	Heart rate QTL 11	2.973		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	92683681	137683681	Rat
737977	Bp160	Blood pressure QTL 160		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	97582336	142582336	Rat
2293142	Bp314	Blood pressure QTL 314			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	101594089	146594089	Rat
61433	Cia2	Collagen induced arthritis QTL 2	5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	100345976	145345976	Rat
724529	Cm16	Cardiac mass QTL 16	2.7		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	1	96717367	160111531	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	90	59	6	354	190	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006229191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008774529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063278177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063278189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC094894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000027320 ⟹ ENSRNOP00000027320

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	95,295,601 - 95,324,562 (+)	Ensembl
Rnor_6.0 Ensembl	1	100,830,064 - 100,836,677 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000056364 ⟹ ENSRNOP00000053202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	104,456,332 - 104,461,051 (+)	Ensembl
mRatBN7.2 Ensembl	1	95,319,805 - 95,324,562 (+)	Ensembl
Rnor_6.0 Ensembl	1	100,832,324 - 100,836,677 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000143154 ⟹ ENSRNOP00000111103

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	104,435,981 - 104,461,053 (+)	Ensembl

RefSeq Acc Id:

XM_006229191 ⟹ XP_006229253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,435,950 - 104,461,049 (+)	NCBI
mRatBN7.2	1	95,299,457 - 95,324,564 (+)	NCBI
Rnor_6.0	1	100,811,727 - 100,836,901 (+)	NCBI

Sequence:

show sequence

CTCACTCCATGGCTGCGAAAAGGAGAGGAGGCAACGGCGGCGGCGGCCTCAGTTGAAGAGTCGG
TGTGAGCAGAGAGTGAAGTCGCGGAAGAACACAGGCAGATGTCCTGCCTTGCTGACCGGTCTCA
TCATTAAATCACCATGAAGACAGCACAGGACCTGGCTTCTCTGGCCTAACAAGGCAGTAGGAAG
TAGGAGAAAGTTATCTCTATTCATCCTGGTTCTGCCTGCGCTAGAGGATGACTTCAGTTCCAGG
CTGACCAGAAGGCCATGGGCGCCAGGAGAGCCCCCCAAAGACCAGCATGCACCCTGCATCTTGT
CCTGGTGGCCACCCTCCTTGGTCTGGCAGTCTCTCTGCAGTGGAGGGCAGCCTCCAACCTGAAC
CTTATCGAGAAGTGTATGGTGGACCATGATTATGAGCAGCTACTGAAGGTGGTGACCTTGGGCC
TCAATCGAACTTCGAAACCCCAGAAGGTGGTAGTGGTTGGTGCGGGCGTGGCTGGGCTGGTAGC
GGCCAAGGTGCTCAGTGATGCAGGACACAAGGTCACCATCCTGGAGGCAGGTAACAGGATTGGG
GGCCGTATCTTCACTTTCCGGGATGAGAAGACAGGCTGGATAGGGGAGCTTGGGGCCATGCGAA
TGCCCAGCTCCCACAGGATCTTGCACCAGCTCTGCAGGAGCCTGGGCCTCAACCTGACTCAGTT
CACACAGTATGATGAGAACGCATGGACAGAGGTGAAAGGCGTGAAGCTGCGAAACTATGTGGTG
GAGAAGATGCCAGAGAAGCTGGGCTACGACCTGAACCACAGAGAAAGGGGCCACTCCCCGGAGG
ACATCTACCAGATGGCACTCAACAAGGCCATCAAAGACGTCAAGGTCTTGGGCTGCAAGAAAGC
CATGAATATGTTCAGCGAGCATACACTCCTGGAATACCTCCTCAAGGAGGGCAACCTGTCCCAG
CCGGCCGTGCAGCTCCTGGGAGATGTGATGTCCAAGGAAGGCTTTTTCTACCTCAGCCTTGCAG
AAGCATTTCGCGCGCACGCCTGCCTGAGTGACCGACTCCGGTACAGCCGCATCGTGGGTGGCTG
GGACCTGCTTCCGCGAGCGCTCCTGAGCTCGCTGTCAGGGACGGTGCTGCTGAATGCGCCAGTG
GTGTCGATCTCTCAGGGGAGGCACGAGGTGCATGTGCACTTCACCACCTCACTACAGTCTCACA
GCTTGGAGGTGATGACCGCAGACGTGGTGCTGCTGACTGCCAGTGGGCCTGCTCTGCAGCGCAT
CTCCTTCTCGCCGCCTCTGACTCGCAAGAGGCAGGAGGCACTGCGCGCACTTCACTACGTGGCA
GCCAGCAAGGTTTTTCTGAGTTTCCATCGGCCTTTCTGGCACGAGGAGCACATCATGGGCGGCC
ACTCCAACACTGACCGCCCATCGCGCCTCATATTCTATCCCGCACCGGGCGAGGGCTCACTGCT
TCTGGCCTCCTATACGTGGTCGGACGCTGCAGCCCCCTTCGCTGGACTGAGCACTGAACAGACC
CTGCATTTGGTGCTCAAGGACCTGGCGGCCCTCCACGGGCCTGTGGTGTACCGGCTGTGGGACG
GCAGGGGTGTGGTCAAGCGCTGGGCGGAGGACCCATATAGCCAGGGAGGCTTCGTGGTGCAGCC
GCCATTGTTTGGGCAAGGGACCGAGGACTATGACTGGTCAGTCCCCTATGGCCGCATTTACTTC
GCAGGCGAGCATACAGCTCTCCCGCATGGCTGGGTAGAGACTGCTGTCAAGTCTGGGTTGCGGG
CCGCGCTGAGGATCAATAGTAACTATGGGTATGGGATGGTCGACCTCGAGACGCTGGAGCATGC
ACTCGCAGAGGCCAGCTTTGCGGAGCAGTATCTGGAAGGGGACCAGCCAGAGGAGCAGCAGGCA
CAGGAAGAAGTCAACCCCGACCGGCAGGATCTCTCGCAGAAGCACTTGTTGGTGGAAACCGGCC
CAGACGGGCAGCAACACGTGTTTGTGGAGAACATACCTGAGCCGCTGGAACACGTGTTCATGAA
GACTAACCCCCAGGAGAAGGGGCACAAGCACCAGATTATATATCCCTCAGAGCACGGACATGTG
CATGGGGAAGTCATCCCCGAAGGGCCTGGGCATGTACACAGGAAACACGGGCATGTGGGATCTG
GCACTCTGCAGCATATGCACGGAGAGGTGGACCACTCGTAATTGCAAAGGGGAAGTGGGCACCC
AGCTCCTAACCCAGCCCTTTTCAGGGTAGACAGACCGCCTACAGTAATAGCCCACAATAAAGTT
ATTTTTGTTAAACCAGAGGCTCACTTCCCTCCTCACTGCTCTGGTTTCCTGAATATAGCTGCCC
TGAATGGGGGACACTTGGGTGAAGGAACACTACACTATGGTCAAGAGGAGATCAGAAGCCATTG
GAGGTTGGG

hide sequence

RefSeq Acc Id:

XM_008759455 ⟹ XP_008757677

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,454,381 - 104,461,049 (+)	NCBI
mRatBN7.2	1	95,317,911 - 95,324,564 (+)	NCBI
Rnor_6.0	1	100,830,734 - 100,836,901 (+)	NCBI

Sequence:

show sequence

ACCATCTATAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCAACAGTGTACTCGC
ATACAAATTCAAAGCTATGGTCCCTGTGTGCCAGACCCTACCTTTACTCTTACCATGGCAACTT
CAGGCTCTCTTATTGGTGCTGGATGGAATCCAAAAGCTGAGGAAGAGCACTAGCACCAGGTGCT
GTCATTCTTACGTTCAGGACACCAAGGCAGGAGGACCATAGGGAGTTTGAGGCCAGCCTGGTAG
ACAACTGAAACACAGTGGCGTTCTCTGAGAGGCAGGCAGACCTCTGAGTCCCAGGACAGCCAGG
GCTACACAGAGAAACTGTGTCTCAGCCAAAAGAAACTCCAGGCTGGGAGGCAGCTGTTGCCCGT
GTTCCCCTCCCAGGACTGTCAATTCCTCTGTAAGGTTGAGACCAAGTACTGTGCCAGAGTTCTG
CTTGACCTAGGGCCTCCAGCCTGCATGGCTTTGCACTTCTAGCCAACTGTTTGGCCAAAGCCAC
AGAGCACACACATCCACCAACCACCATGCACTTAATGGGCTCTGGAGTTCCCCAGTCTGCTCTC
TGTGATTTCCCACCCTGGCTGTTCCCCTAACCCATATTCTCCCCAACCCTAATGAAAATCCCCC
TGCATCCTGTTGCCTCACCTCATTAGTTTTGGGCGACCCTGATTTCATCTGCTCATGGCCTCCT
GCAGGCCAGAGGCAGAAGCTTCTAGGGTCATTTCTTTGAGGTGTCAGTCCAGAGTCTGCTGCCC
AGCAGTTCTTAAGACAAAAGCAGGAAGGACAGGGGGCCACTTAGCTATCACCAACCAGTCCCCC
TCCCCACACCCACCCCATGTTCCTGCAGCTGCAGCAACAGATTCTGGACCTGGCCAGGTGCTAC
ATGCAGTCCCTGAGCTGGCTCCATTCCTGCCATTTTGTGCTGGACCATGTGACATTAGCAGGCC
TATATGGGCTTTGAATGTGGAAGGTCCCAGGCTTGTGTGTGCCCATTTCATACAGGAGACAGGC
CTGGAGAGATGGGGAGAGGAGGTCTAGCCCAGGGATGGGCAGATCCAAGTCCAAAAAGCCTAGA
GCACAAGTTTTACCATCAACAATGCCACCTGGATGGGTAGTCCCCACCCCCAGCTTCCCCAAAG
CTATTTGGAGCAGGAGGAAGAAAAAATAGACTAAGTTACTTCCTCCTGTGATCCTCTTCCCATC
ACCTCCCCCAGCATCTGACCCTAGCTCAGGAAAGCACTTTTAATTCCCCAGGGAGGTGAGTGGG
CGGGGCTGGCTTCTTTTAAAGGGAGAATTGCAGAGGCTCTGCTCTGCTGTCCTGTCCAAGAGAG
CTGGAGACTGCAGCTGCCACTTGAGCCATGGCTGGGCTGGCCCTGCATCTTGTCCTGGTGGCCA
CCCTCCTTGGTCTGGCAGTCTCTCTGCAGTGGAGGGCAGCCTCCAACCTGAACCTTATCGAGAA
GTGTATGGTGGACCATGATTATGAGCAGCTACTGAAGGTGGTGACCTTGGGCCTCAATCGAACT
TCGAAACCCCAGAAGGTGGTAGTGGTTGGTGCGGGCGTGGCTGGGCTGGTAGCGGCCAAGGTGC
TCAGTGATGCAGGACACAAGGTCACCATCCTGGAGGCAGGTAACAGGATTGGGGGCCGTATCTT
CACTTTCCGGGATGAGAAGACAGGCTGGATAGGGGAGCTTGGGGCCATGCGAATGCCCAGCTCC
CACAGGATCTTGCACCAGCTCTGCAGGAGCCTGGGCCTCAACCTGACTCAGTTCACACAGTATG
ATGAGAACGCATGGACAGAGGTGAAAGGCGTGAAGCTGCGAAACTATGTGGTGGAGAAGATGCC
AGAGAAGCTGGGCTACGACCTGAACCACAGAGAAAGGGGCCACTCCCCGGAGGACATCTACCAG
ATGGCACTCAACAAGGCCATCAAAGACGTCAAGGTCTTGGGCTGCAAGAAAGCCATGAATATGT
TCAGCGAGCATACACTCCTGGAATACCTCCTCAAGGAGGGCAACCTGTCCCAGCCGGCCGTGCA
GCTCCTGGGAGATGTGATGTCCAAGGAAGGCTTTTTCTACCTCAGCCTTGCAGAAGCATTTCGC
GCGCACGCCTGCCTGAGTGACCGACTCCGGTACAGCCGCATCGTGGGTGGCTGGGACCTGCTTC
CGCGAGCGCTCCTGAGCTCGCTGTCAGGGACGGTGCTGCTGAATGCGCCAGTGGTGTCGATCTC
TCAGGGGAGGCACGAGGTGCATGTGCACTTCACCACCTCACTACAGTCTCACAGCTTGGAGGTG
ATGACCGCAGACGTGGTGCTGCTGACTGCCAGTGGGCCTGCTCTGCAGCGCATCTCCTTCTCGC
CGCCTCTGACTCGCAAGAGGCAGGAGGCACTGCGCGCACTTCACTACGTGGCAGCCAGCAAGGT
TTTTCTGAGTTTCCATCGGCCTTTCTGGCACGAGGAGCACATCATGGGCGGCCACTCCAACACT
GACCGCCCATCGCGCCTCATATTCTATCCCGCACCGGGCGAGGGCTCACTGCTTCTGGCCTCCT
ATACGTGGTCGGACGCTGCAGCCCCCTTCGCTGGACTGAGCACTGAACAGACCCTGCATTTGGT
GCTCAAGGACCTGGCGGCCCTCCACGGGCCTGTGGTGTACCGGCTGTGGGACGGCAGGGGTGTG
GTCAAGCGCTGGGCGGAGGACCCATATAGCCAGGGAGGCTTCGTGGTGCAGCCGCCATTGTTTG
GGCAAGGGACCGAGGACTATGACTGGTCAGTCCCCTATGGCCGCATTTACTTCGCAGGCGAGCA
TACAGCTCTCCCGCATGGCTGGGTAGAGACTGCTGTCAAGTCTGGGTTGCGGGCCGCGCTGAGG
ATCAATAGTAACTATGGGTATGGGATGGTCGACCTCGAGACGCTGGAGCATGCACTCGCAGAGG
CCAGCTTTGCGGAGCAGTATCTGGAAGGGGACCAGCCAGAGGAGCAGCAGGCACAGGAAGAAGT
CAACCCCGACCGGCAGGATCTCTCGCAGAAGCACTTGTTGGTGGAAACCGGCCCAGACGGGCAG
CAACACGTGTTTGTGGAGAACATACCTGAGCCGCTGGAACACGTGTTCATGAAGACTAACCCCC
AGGAGAAGGGGCACAAGCACCAGATTATATATCCCTCAGAGCACGGACATGTGCATGGGGAAGT
CATCCCCGAAGGGCCTGGGCATGTACACAGGAAACACGGGCATGTGGGATCTGGCACTCTGCAG
CATATGCACGGAGAGGTGGACCACTCGTAATTGCAAAGGGGAAGTGGGCACCCAGCTCCTAACC
CAGCCCTTTTCAGGGTAGACAGACCGCCTACAGTAATAGCCCACAATAAAGTTATTTTTGTTAA
ACCAGAGGCTCACTTCCCTCCTCACTGCTCTGGTTTCCTGAATATAGCTGCCCTGAATGGGGGA
CACTTGGGTGAAGGAACACTACACTATGGTCAAGAGGAGATCAGAAGCCATTGGAGGTTGGG

hide sequence

RefSeq Acc Id:

XM_039094026 ⟹ XP_038949954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,451,457 - 104,461,049 (+)	NCBI
mRatBN7.2	1	95,314,967 - 95,324,564 (+)	NCBI

RefSeq Acc Id:

XM_039094028 ⟹ XP_038949956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,435,950 - 104,461,049 (+)	NCBI
mRatBN7.2	1	95,299,457 - 95,324,564 (+)	NCBI

RefSeq Acc Id:

XM_063278177 ⟹ XP_063134247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,435,540 - 104,461,049 (+)	NCBI

RefSeq Acc Id:

XM_063278189 ⟹ XP_063134259

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	104,457,612 - 104,461,049 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001419633	(Get FASTA)	NCBI Sequence Viewer
	NP_001419636	(Get FASTA)	NCBI Sequence Viewer
	XP_006229253	(Get FASTA)	NCBI Sequence Viewer
	XP_008757677	(Get FASTA)	NCBI Sequence Viewer
	XP_038949954	(Get FASTA)	NCBI Sequence Viewer
	XP_038949956	(Get FASTA)	NCBI Sequence Viewer
	XP_063134247	(Get FASTA)	NCBI Sequence Viewer
	XP_063134259	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM07456	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027320.6
	ENSRNOP00000053202
	ENSRNOP00000053202.3
	ENSRNOP00000111103
	ENSRNOP00000111103.1

RefSeq Acc Id:	XP_006229253 ⟸ XM_006229191
- Peptide Label:	isoform X1
- UniProtKB:	D3ZN20 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGARRAPQRPACTLHLVLVATLLGLAVSLQWRAASNLNLIEKCMVDHDYEQLLKVVTLGLNRTS KPQKVVVVGAGVAGLVAAKVLSDAGHKVTILEAGNRIGGRIFTFRDEKTGWIGELGAMRMPSSH RILHQLCRSLGLNLTQFTQYDENAWTEVKGVKLRNYVVEKMPEKLGYDLNHRERGHSPEDIYQM ALNKAIKDVKVLGCKKAMNMFSEHTLLEYLLKEGNLSQPAVQLLGDVMSKEGFFYLSLAEAFRA HACLSDRLRYSRIVGGWDLLPRALLSSLSGTVLLNAPVVSISQGRHEVHVHFTTSLQSHSLEVM TADVVLLTASGPALQRISFSPPLTRKRQEALRALHYVAASKVFLSFHRPFWHEEHIMGGHSNTD RPSRLIFYPAPGEGSLLLASYTWSDAAAPFAGLSTEQTLHLVLKDLAALHGPVVYRLWDGRGVV KRWAEDPYSQGGFVVQPPLFGQGTEDYDWSVPYGRIYFAGEHTALPHGWVETAVKSGLRAALRI NSNYGYGMVDLETLEHALAEASFAEQYLEGDQPEEQQAQEEVNPDRQDLSQKHLLVETGPDGQQ HVFVENIPEPLEHVFMKTNPQEKGHKHQIIYPSEHGHVHGEVIPEGPGHVHRKHGHVGSGTLQH MHGEVDHS hide sequence

RefSeq Acc Id:	XP_008757677 ⟸ XM_008759455
- Peptide Label:	isoform X2
- UniProtKB:	A6JAS8 (UniProtKB/TrEMBL), D3ZLJ6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGLALHLVLVATLLGLAVSLQWRAASNLNLIEKCMVDHDYEQLLKVVTLGLNRTSKPQKVVVV GAGVAGLVAAKVLSDAGHKVTILEAGNRIGGRIFTFRDEKTGWIGELGAMRMPSSHRILHQLCR SLGLNLTQFTQYDENAWTEVKGVKLRNYVVEKMPEKLGYDLNHRERGHSPEDIYQMALNKAIKD VKVLGCKKAMNMFSEHTLLEYLLKEGNLSQPAVQLLGDVMSKEGFFYLSLAEAFRAHACLSDRL RYSRIVGGWDLLPRALLSSLSGTVLLNAPVVSISQGRHEVHVHFTTSLQSHSLEVMTADVVLLT ASGPALQRISFSPPLTRKRQEALRALHYVAASKVFLSFHRPFWHEEHIMGGHSNTDRPSRLIFY PAPGEGSLLLASYTWSDAAAPFAGLSTEQTLHLVLKDLAALHGPVVYRLWDGRGVVKRWAEDPY SQGGFVVQPPLFGQGTEDYDWSVPYGRIYFAGEHTALPHGWVETAVKSGLRAALRINSNYGYGM VDLETLEHALAEASFAEQYLEGDQPEEQQAQEEVNPDRQDLSQKHLLVETGPDGQQHVFVENIP EPLEHVFMKTNPQEKGHKHQIIYPSEHGHVHGEVIPEGPGHVHRKHGHVGSGTLQHMHGEVDHS hide sequence

Ensembl Acc Id:

ENSRNOP00000053202 ⟸ ENSRNOT00000056364

Ensembl Acc Id:

ENSRNOP00000027320 ⟸ ENSRNOT00000027320

RefSeq Acc Id:	XP_038949956 ⟸ XM_039094028
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038949954 ⟸ XM_039094026
- Peptide Label:	isoform X1
- UniProtKB:	D3ZN20 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063134247 ⟸ XM_063278177
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063134259 ⟸ XM_063278189
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSRNOP00000111103 ⟸ ENSRNOT00000143154

Protein Domains

Amine oxidase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZN20-F1-model_v2	AlphaFold	D3ZN20	1-648	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304831	AgrOrtholog
BioCyc Gene	G2FUF-59750	BioCyc
Ensembl Genes	ENSRNOG00000020148	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000027320.9	UniProtKB/TrEMBL
	ENSRNOT00000056364	ENTREZGENE
	ENSRNOT00000056364.5	UniProtKB/TrEMBL
	ENSRNOT00000143154	ENTREZGENE
	ENSRNOT00000143154.1	UniProtKB/TrEMBL
Gene3D-CATH	3.50.50.60	UniProtKB/TrEMBL
	3.90.660.10	UniProtKB/TrEMBL
	Guanine Nucleotide Dissociation Inhibitor, domain 1	UniProtKB/TrEMBL
InterPro	Amineoxid_fl	UniProtKB/TrEMBL
	Amino_oxidase	UniProtKB/TrEMBL
	FAD/NAD-bd_sf	UniProtKB/TrEMBL
	Flavin_monoamine_oxidase	UniProtKB/TrEMBL
KEGG Report	rno:100360621	UniProtKB/TrEMBL
NCBI Gene	Il4i1	ENTREZGENE
PANTHER	FLAVIN MONOAMINE OXIDASE	UniProtKB/TrEMBL
	L-AMINO-ACID OXIDASE	UniProtKB/TrEMBL
Pfam	Amino_oxidase	UniProtKB/TrEMBL
PhenoGen	Il4i1	PhenoGen
PRINTS	AMINEOXDASEF	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000020148	RatGTEx
Superfamily-SCOP	FAD-linked reductases, C-terminal domain	UniProtKB/TrEMBL
	SSF51905	UniProtKB/TrEMBL
UniProt	A6JAS8	ENTREZGENE, UniProtKB/TrEMBL
	D3ZLJ6	ENTREZGENE, UniProtKB/TrEMBL
	D3ZN20	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2014-07-10	Il4i1	interleukin 4 induced 1	LOC100360621	rCG53598-like	Data merged from RGD:2321736	737654	APPROVED
2010-05-06	LOC100360621	rCG53598-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	Il4i1	interleukin 4 induced 1	Il4i1_predicted	interleukin 4 induced 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Il4i1_predicted	interleukin 4 induced 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

Imported Annotations - SMPDB

Send us a Message

Imported Disease Annotations - CTD

Imported Annotations - SMPDB