Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Cdc23 | Rat | infertility | | ISS | Cdc23 (Mus musculus) | 13592920 | | MouseDO | | |
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Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Cdc23 | Rat | infertility | | ISS | Cdc23 (Mus musculus) | 13592920 | | MouseDO | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
3. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
4. | GOA pipeline | RGD automated data pipeline |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:9790767 | PMID:12477932 | PMID:14657031 | PMID:16364912 | PMID:18485873 | PMID:21926987 |
Cdc23 (Rattus norvegicus - Norway rat) |
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CDC23 (Homo sapiens - human) |
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Cdc23 (Mus musculus - house mouse) |
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Cdc23 (Chinchilla lanigera - long-tailed chinchilla) |
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CDC23 (Pan paniscus - bonobo/pygmy chimpanzee) |
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CDC23 (Canis lupus familiaris - dog) |
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Cdc23 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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CDC23 (Sus scrofa - pig) |
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CDC23 (Chlorocebus sabaeus - green monkey) |
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Cdc23 (Heterocephalus glaber - naked mole-rat) |
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Variants in Cdc23
71 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
D18Rat130 |
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RH127370 |
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RH132745 |
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AA859935 |
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RH136974 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001100659 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_008772028 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063277222 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010059562 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010059563 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | BC098784 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
CH473974 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000018 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000037888 ⟹ ENSRNOP00000035675 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000101231 ⟹ ENSRNOP00000089789 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000110937 ⟹ ENSRNOP00000082129 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000114348 ⟹ ENSRNOP00000094723 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001100659 ⟹ NP_001094129 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_008772028 ⟹ XP_008770250 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_063277222 ⟹ XP_063133292 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010059562 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010059563 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001094129 | (Get FASTA) | NCBI Sequence Viewer |
XP_008770250 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063133292 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH98784 | (Get FASTA) | NCBI Sequence Viewer |
EDL76236 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76237 | (Get FASTA) | NCBI Sequence Viewer | |
EDL76238 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000035675.5 | ||
ENSRNOP00000082129.1 | |||
ENSRNOP00000089789.1 | |||
ENSRNOP00000094723.1 |
RefSeq Acc Id: | NP_001094129 ⟸ NM_001100659 |
- UniProtKB: | F1LRQ6 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_008770250 ⟸ XM_008772028 |
- Peptide Label: | isoform X2 |
- UniProtKB: | F1LRQ6 (UniProtKB/TrEMBL), A0A8I5ZTG0 (UniProtKB/TrEMBL), A6J2V5 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000035675 ⟸ ENSRNOT00000037888 |
Ensembl Acc Id: | ENSRNOP00000082129 ⟸ ENSRNOT00000110937 |
Ensembl Acc Id: | ENSRNOP00000089789 ⟸ ENSRNOT00000101231 |
Ensembl Acc Id: | ENSRNOP00000094723 ⟸ ENSRNOT00000114348 |
RefSeq Acc Id: | XP_063133292 ⟸ XM_063277222 |
- Peptide Label: | isoform X1 |
- UniProtKB: | F1LRQ6 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-F1LRQ6-F1-model_v2 | AlphaFold | F1LRQ6 | 1-571 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13700698 | ||||||||
Promoter ID: | EPDNEW_R11221 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Cdc23_1 | ||||||||
Description: | cell division cycle 23 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1304819 | AgrOrtholog |
BioCyc Gene | G2FUF-7951 | BioCyc |
Ensembl Genes | ENSRNOG00000024241 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000037888.5 | UniProtKB/TrEMBL |
ENSRNOT00000101231.1 | UniProtKB/TrEMBL | |
ENSRNOT00000110937.1 | UniProtKB/TrEMBL | |
ENSRNOT00000114348.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.25.40.10 | UniProtKB/TrEMBL |
IMAGE_CLONE | IMAGE:7374967 | IMAGE-MGC_LOAD |
InterPro | APC8 | UniProtKB/TrEMBL |
TPR-like_helical | UniProtKB/TrEMBL | |
TPR_repeat | UniProtKB/TrEMBL | |
MGC_CLONE | MGC:112820 | IMAGE-MGC_LOAD |
NCBI Gene | 291689 | ENTREZGENE |
PANTHER | CELL DIVISION CYCLE 16,23,27 | UniProtKB/TrEMBL |
CELL DIVISION CYCLE PROTEIN 23 HOMOLOG | UniProtKB/TrEMBL | |
Pfam | APC8 | UniProtKB/TrEMBL |
TPR_11 | UniProtKB/TrEMBL | |
TPR_8 | UniProtKB/TrEMBL | |
PhenoGen | Cdc23 | PhenoGen |
PROSITE | TPR | UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000024241 | RatGTEx |
SMART | TPR | UniProtKB/TrEMBL |
Superfamily-SCOP | SSF48452 | UniProtKB/TrEMBL |
UniProt | A0A8I5ZTG0 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I6AB31_RAT | UniProtKB/TrEMBL | |
A0A8I6ANL9_RAT | UniProtKB/TrEMBL | |
A6J2V4_RAT | UniProtKB/TrEMBL | |
A6J2V5 | ENTREZGENE, UniProtKB/TrEMBL | |
A6J2V6_RAT | UniProtKB/TrEMBL | |
F1LRQ6 | ENTREZGENE, UniProtKB/TrEMBL | |
Q4G037_RAT | UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2012-07-16 | Cdc23 | cell division cycle 23 | Cdc23 | CDC23 (cell division cycle 23, yeast, homolog) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-12-06 | Cdc23 | CDC23 (cell division cycle 23, yeast, homolog) | Cdc23_predicted | CDC23 (cell division cycle 23, yeast, homolog) (predicted) | Symbol and Name updated | 1559027 | APPROVED |
2005-01-12 | Cdc23_predicted | CDC23 (cell division cycle 23, yeast, homolog) (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |