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Gene: Plch2 (phospholipase C, eta 2) Rattus norvegicus

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Symbol:

Plch2

Name:

phospholipase C, eta 2

RGD ID:

1304675

Description:

Predicted to enable phosphatidylinositol-4,5-bisphosphate phospholipase C activity. Predicted to be involved in several processes, including phosphatidylinositol-mediated signaling; phospholipase C-activating G protein-coupled receptor signaling pathway; and release of sequestered calcium ion into cytosol. Predicted to be located in plasma membrane. Orthologous to human PLCH2 (phospholipase C eta 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; alpha-Zearalanol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2; LOC313756; RGD1304675; similar to FLJ00414 protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PLCH2 (phospholipase C eta 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, Panther
Mus musculus (house mouse):	Plch2 (phospholipase C, eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Plch2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PLCH2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PLCH2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Plch2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PLCH2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PLCH2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Plch2 (phospholipase C eta 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	GRWD1 (glutamate rich WD repeat containing 1)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Plch2 (phospholipase C, eta 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PLCH2 (phospholipase C eta 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	plch2a (phospholipase C, eta 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	plch2a (phospholipase C, eta 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PLC1	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	plch2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	plch2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	170,826,543 - 170,885,012 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	170,826,543 - 170,885,152 (-)	Ensembl				GRCr8
mRatBN7.2	5	165,544,209 - 165,613,769 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	165,544,200 - 165,602,356 (-)	Ensembl				mRatBN7.2
Rnor_6.0	5	172,386,400 - 172,455,965 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	172,388,598 - 172,424,081 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	175,842,358 - 175,871,763 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	171,786,340 - 171,815,148 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	163,750,666 - 163,780,119 (-)	NCBI		Celera
RGSC_v3.1	5	171,796,834 - 171,825,402 (-)	NCBI
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 1p36 deletion syndrome (ISO)

dilated cardiomyopathy 1LL (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 2 (ISO)

Goldberg-Shprintzen syndrome (ISO)

immunodeficiency 16 (ISO)

immunodeficiency 38 (ISO)

Joubert syndrome 25 (ISO)

Neurodevelopmental Disorders (ISO)

Peroxisome Biogenesis Disorder, Complementation Group 7 (ISO)

Shprintzen-Goldberg Craniosynostosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,4'-trichlorobiphenyl (ISO)

2-hydroxypropanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

aldrin (ISO)

alpha-Zearalanol (EXP)

amitrole (EXP)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (ISO)

bisphenol F (ISO)

butan-1-ol (ISO)

carbon nanotube (ISO)

chloroethene (ISO)

chrysene (ISO)

clotrimazole (EXP)

cyclosporin A (ISO)

dexamethasone (ISO)

disodium selenite (ISO)

ethanol (ISO)

ethylparaben (ISO)

folic acid (ISO)

fulvestrant (ISO)

GSK-J4 (ISO)

indometacin (ISO)

methapyrilene (ISO)

methimazole (EXP)

methoxychlor (EXP)

N,N-diethyl-m-toluamide (ISO)

nitrates (EXP)

paraquat (EXP)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctanoic acid (EXP)

potassium bromate (ISO)

rac-lactic acid (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

streptozocin (ISO)

sulforaphane (ISO)

titanium dioxide (ISO)

tricetin (ISO)

trichloroethene (EXP)

Triptolide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular signal transduction (IEA)

lipid catabolic process (IEA)

lipid metabolic process (IEA)

phosphatidylinositol metabolic process (IBA,IEA,ISO)

phosphatidylinositol-mediated signaling (IBA)

phospholipase C-activating G protein-coupled receptor signaling pathway (IEA,ISO)

release of sequestered calcium ion into cytosol (IBA)

signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

membrane (IEA)

plasma membrane (IEA,ISO)

Molecular Function

calcium ion binding (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

phosphatidylinositol-4,5-bisphosphate phospholipase C activity (IBA,IEA,ISO)

phospholipase C activity (IEA,ISO)

phosphoric diester hydrolase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	GOA pipeline	RGD automated data pipeline
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15899900

Genomics

Comparative Map Data

Plch2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	170,826,543 - 170,885,012 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	170,826,543 - 170,885,152 (-)	Ensembl				GRCr8
mRatBN7.2	5	165,544,209 - 165,613,769 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	165,544,200 - 165,602,356 (-)	Ensembl				mRatBN7.2
Rnor_6.0	5	172,386,400 - 172,455,965 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	172,388,598 - 172,424,081 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	175,842,358 - 175,871,763 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	171,786,340 - 171,815,148 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	163,750,666 - 163,780,119 (-)	NCBI		Celera
RGSC_v3.1	5	171,796,834 - 171,825,402 (-)	NCBI
Cytogenetic Map	5	q36	NCBI

PLCH2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	2,415,943 - 2,505,532 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	2,425,980 - 2,505,532 (+)	Ensembl			hg38	GRCh38
GRCh37	1	2,398,890 - 2,436,971 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	2,397,614 - 2,426,824 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	2,431,059 - 2,469,127	NCBI
Celera	1	149,336 - 178,536 (-)	NCBI		Celera
Cytogenetic Map	1	p36.32	NCBI
HuRef	1	1,686,028 - 1,715,412 (+)	NCBI		HuRef
CHM1_1	1	2,394,552 - 2,423,710 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	1,855,498 - 1,946,621 (+)	NCBI		T2T-CHM13v2.0

Plch2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	155,067,572 - 155,148,548 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	155,067,572 - 155,141,241 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	154,983,115 - 155,064,091 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	154,983,115 - 155,056,784 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	154,357,224 - 154,385,093 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	153,827,177 - 153,854,782 (-)	NCBI		MGSCv36	mm8
Celera	4	157,255,205 - 157,283,081 (-)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	86.13	NCBI

Plch2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	8,718,155 - 8,775,228 (-)	Ensembl
ChiLan1.0	NW_004955486	8,717,799 - 8,785,144 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLCH2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	225,744,862 - 225,809,029 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	224,405,747 - 224,469,453 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	1,171,623 - 1,235,592 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	2,336,856 - 2,375,012 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	2,337,005 - 2,374,695 (+)	Ensembl			panPan2	panpan1.1

PLCH2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	57,303,160 - 57,368,568 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	57,302,996 - 57,371,468 (+)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	5	57,507,893 - 57,572,778 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	57,507,843 - 57,572,778 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	57,498,906 - 57,564,121 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	57,391,247 - 57,456,451 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	57,781,026 - 57,846,156 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Plch2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	28,332,866 - 28,399,090 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936737	1,066,825 - 1,133,216 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936737	1,066,860 - 1,131,627 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLCH2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	64,325,952 - 64,392,068 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	64,325,918 - 64,392,070 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	58,630,240 - 58,696,137 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLCH2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	129,053,571 - 129,127,238 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666054	33,399,537 - 33,461,491 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plch2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	7,534,265 - 7,588,288 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624818	7,533,889 - 7,595,887 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Plch2
289 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	141
Count of miRNA genes:	99
Interacting mature miRNAs:	105
Transcripts:	ENSRNOT00000019096, ENSRNOT00000038789, ENSRNOT00000065585
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	124965598	166875058	Rat
631272	Lanf1	Left ventricular atrial natriuretic factor QTL 1	12		heart left ventricle natriuretic peptide A amount (VT:0010596)	heart left ventricle natriuretic peptide A level (CMO:0002165)	5	151113452	166875058	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
631562	Apr2	Acute phase response QTL 2	3.7		blood murinoglobulin 1 amount (VT:0010597)	plasma murinoglobulin 1 level (CMO:0001931)	5	135927956	166875058	Rat
634349	Bp139	Blood pressure QTL 139		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	128924607	166875058	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	135929696	166875058	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	126424772	166875058	Rat
1549904	Neuinf1	Neuroinflammation QTL 1	3	0	nervous system integrity trait (VT:0010566)	blood T lymphocyte count (CMO:0000110)	5	154828214	166875058	Rat
738018	Anxrr4	Anxiety related response QTL 4	5.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	5	130130159	166875058	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	128506074	166875058	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	131345754	166875058	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	82394392	166664054	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	127798274	166875058	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	132717196	165560427	Rat
1641920	Colcs1	Colorectal carcinoma susceptibility QTL 1	2.99	0.0055	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	5	121846814	166846814	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	127798274	166875058	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	128506074	166875058	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	143069996	166846814	Rat

Markers in Region

D5Mgh9

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	170,842,632 - 170,842,766 (+)	Marker Load Pipeline
mRatBN7.2	5	165,560,291 - 165,560,427 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	172,402,477 - 172,402,610	NCBI	Rnor6.0
Rnor_5.0	5	175,858,354 - 175,858,487	UniSTS	Rnor5.0
RGSC_v3.4	5	171,801,733 - 171,801,867	RGD	RGSC3.4
RGSC_v3.4	5	171,801,734 - 171,801,867	UniSTS	RGSC3.4
Celera	5	163,766,696 - 163,766,843	UniSTS
RGSC_v3.1	5	171,812,229 - 171,812,362	RGD
RH 3.4 Map	5	1157.1	UniSTS
RH 3.4 Map	5	1157.1	RGD
RH 2.0 Map	5	1139.8	RGD
Cytogenetic Map	5	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	7	42	157	78	77	46	84	46	6	304	155	9	132	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001427051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006225661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005505150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC134160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000019096 ⟹ ENSRNOP00000019096

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	170,826,543 - 170,854,169 (-)	Ensembl
mRatBN7.2 Ensembl	5	165,544,200 - 165,571,830 (-)	Ensembl
Rnor_6.0 Ensembl	5	172,388,598 - 172,424,081 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097454 ⟹ ENSRNOP00000086635

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	170,826,543 - 170,855,806 (-)	Ensembl
mRatBN7.2 Ensembl	5	165,544,200 - 165,573,467 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115181 ⟹ ENSRNOP00000095956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	170,826,547 - 170,885,152 (-)	Ensembl
mRatBN7.2 Ensembl	5	165,544,200 - 165,602,356 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115681 ⟹ ENSRNOP00000080174

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	165,544,200 - 165,573,467 (-)	Ensembl

RefSeq Acc Id:

NM_001427050 ⟹ NP_001413979

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,826,547 - 170,864,186 (-)	NCBI

RefSeq Acc Id:

NM_001427051 ⟹ NP_001413980

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,826,543 - 170,864,186 (-)	NCBI

RefSeq Acc Id:

XM_008764396 ⟹ XP_008762618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,826,556 - 170,884,968 (-)	NCBI
mRatBN7.2	5	165,544,209 - 165,602,699 (-)	NCBI
Rnor_6.0	5	172,386,400 - 172,444,812 (-)	NCBI

Sequence:

show sequence

TGCGGGCGGAGAGCAATGACCTCCCTCTCAGCTCTGCTTTGGCTGCGTGGAGCAGCCTCGAGAT
GTGGGAAGCGCTCTCAGCCCCGCCCCCTCCTGGTCCAAGGCTCCGGCCACGCAGAGGCGAGGGG
GGAGGCTGCGGGTGCTTCTTTGCAGAAAGAGTACTTTGGTTGCGGCGGGGCGCGGGGCGGGTGC
TGGCCCCGCTGTCCTCCTGGCTCCCAGTCTCTGCGCGTTGCGCTTGCCCGCGGTTCCACGTCGC
GTCCCGCTCTACGCGCAGCGCTGCCGGGCCCCCCGGCCCCCTCCCAGCGCGGGGCGGGCAGGGG
GTGTGGTGCGGGCGGCACGAGTGACAGCGCGCTCCTCGCGCGGCGCCTCCACGGGGCTCAGTGT
CACAGCGCCGAACGCGCTGCGCGCACAGTCCGCCGCGGGTCGCCAGCCCTGGCAAAGCGATGTC
CTCGGAGCCTTAGCCTCAGTCAGAGCCAGGCCACTGACCACCCGAGTCCTCGCCCTCGTGGCCA
CCTCGCTGCTGTCAACGCGGAGACAATGGACGCGGGAGCCGCCCCGCAGAAGCACATGGAACGA
TGCATGAGTGCCATGCAGGAGGGGACCCAGATGGTGAAGCTCCGTGGCAGCTCCAAGGGCTTGG
TCCGCTTCTACTACCTGGATGAGCACCGTTCCTGCCTCCGCTGGCGGCCCTCACGCAAGAACGA
GAAAGCCAAGATTTCCATCGACTCCATCCAGGAGGTGAGTGAGGGCCGGCAGTCTGAAATCTTC
CAGCGCTACCCGGACAGCAGCTTTGACCCCAACTGTTGCTTCAGCATCTACTACGGCAGCCACC
GAGAGTCGCTGGACTTGGTCTCACCAAGCAGTGAAGAGGCACGTACCTGGGTCACCGGCCTTCG
CTACCTCATGGCTGGCATCAGCGACGAAGACAGCCTAGCCCGTCGCCAGCGTACCAGGGACCAG
TGGCTGAAGCAGACGTTTGATGAGGCTGACAAGAACGGTGACGGTAGCCTGAGCATCAGCGAGG
TCCTGCAGCTGCTACATAAACTCAACGTGAACCTGCCCCGGCAGAGGGTGAAACAGATGTTCAG
GGAGGCAGACACAGATGACCATCAGGGGACACTAGGCTTTGAGGAATTCTGCGCCTTCTACAAG
ATGATGTCCACTCGCCGAGACCTCTACCTGCTCATGCTGACCTACAGCAACCATAAGGACCACT
TGGATGCCTCCGACCTGCAGCGCTTTCTGGAGGTGGAGCAGAAGATGAGCGGCGTGACGCTCGA
GAGCTGTCAGAGCATCATCGAGCAATTTGAGCCTTGTCTGGAGAATAAGAGCAAAGGGGTGTTG
GGGATTGATGGCTTTACCAACTACACGCGGAGCCCCGCCGGTGACATCTTCAACCCTGAGCACC
ACAGAGTGCACCAAGACATGACGCAGCCTCTGAGTCACTACTTCATCACCTCCTCCCACAACAC
CTACCTCGTGGGTGACCAGCTCATGTCCCAGTCTCGGGTGGACATGTATGCCTGGGTCCTGCAG
GCCGGCTGCCGCTGTGTGGAGGTGGACTGCTGGGATGGGCCTGATGGGGAACCCATTGTCCACC
ATGGCTACACTCTGACCTCCAAGATCCTTTTCAAAGATGTCATCGAAACCATCAACAAATATGC
CTTCATCAAGAATGAGTACCCAGTGATCCTGTCCATTGAGAACCACTGTAGTGTTGTTCAGCAG
AAAAAGATGGCCCAGTATCTCACTGACATCCTTGGAGACAAGCTGGACCTCTCCTCAGTGAGCG
GCGAAGATGCCACCATGCTTCCTTCTCCACAGATGCTCAAGGGCAAGATCCTGGTGAAGGGGAA
GAAGCTCCCTGCCAATATCAGTGAGGATGCAGAAGAAGGTGAAGTGTCTGATGAGGACAGTGCC
GATGAGATTGAGGATGATTGCAAGCTCCTCAACGGAGACGCCTCCACCAATCGGAAGCGTGTGG
AAAACATCGCTAAGAAGAAGTTGGATTCTCTGATCAAGGAGTCAAAGATCCGTGACTGTGAAGA
CCCCAATGACTTCACTGTCTCCACACTGTCCCCATCTGGGAAGCTTGGGCACAAAGCAGAGGCC
AAGAAGGCTCAGAGCAAGGCCGAGGAAGATGTGGAGTCTGGGGAGGACACCGGGGTGAGCAGGC
GGAACAGCCGTCTCCTCATGAGCAGCTTCTCCAAGCGTAAGAAAAAAGGCAGCAAGATAAAGAA
GGTGGCCAGCGTGGAGGAGGGGGATGAGAGCCTGGACTCCCCAGGAAGCCAGAGCCGTGGGACT
GCCCGGCAAAAGAAGACCATGAAGCTGTCACGAGCCCTCTCGGACCTAGTGAAATATACCAAGT
CTGTGGGAACCCATGACGTGGAAATGGAGGTGGTATCTAGCTGGCAAGTGTCGTCCTTCAGCGA
GACCAAGGCCCACCAGATCCTGCAGCAGAAGCCTGCCCAGTACCTGCGCTTTAACCAGCACCAG
CTCTCCCGCATATACCCCTCCTCCTACCGGGTGGACTCCAGCAACTACAATCCACAACCCTTCT
GGAATGCTGGTTGCCAGATGGTTGCCCTGAACTACCAGTCGGAGGGGCGGATGCTGCAGCTGAA
CAGGGCAAAGTTCAGTGCCAACGGTGGCTGTGGCTACGTGCTCAAACCCCAATGCATGTGCCAG
GGTGTTTTCAACCCCAACTCTGAGGACCCCTTGCCAGGGCAGCTCAAGAAGCAGCTGGCCCTGA
GGATCATTAGTGGCCAGCAGCTGCCCAAGCCTCGGGACTCGGTGCTGGGTGACCGTGGGGAGAT
CATCGACCCCTTCGTGGAGGTGGAGGTCATCGGGCTCCCCGTGGACTGCAGCAAGGAGCAGACC
AGAGTGGTGGATGACAATGGGTTCAACCCCATGTGGGAGGAGACACTGGTGTTCACTGTACACA
TGCCCGAGATTGCGCTTGTGCGCTTCCTGGTCTGGGACCACGACCCGATTGGACGGGACTTCAT
CGGCCAGAGGACGCTGGCCTTTAGCAGCATGATGCCAGGCTACCGGCACGTGTACCTAGAAGGC
ATGGAGGAGGCCTCCATCTTTGTACATGTGGCCGTCAGTGACATCAGTGGTAAGGTCAAGCAGA
CTCTGGGTCTAAAAGGTCTCTTCCTCCGAGGCCCAAAGCCAGGCTCACTGGACAGTCATGCTGC
TGGGCAGCCCCTGCCCCGGCCCTCCGTTAGCCAGAGGCTCCTGCGGCGCACAGCCAGTGCCCCA
ACCAAGAGCCAGAAGCCAAGTCGCAAGGGCTTCCCAGAGCTGGCCCTGGGCACACAGGACGCAG
GCTCCGAGGGGGCGGCTGACGACGTGGCACCCCCTAGCCCCAACCCAGCTCTGGAGGCCCCTAC
TCAAGAGAGGTCAGGCAGCAGCAGTCCCCGAGACACTCGCCTCTTCCCCCTGCAGCGGCCCATC
TCCCCCCTGTGCAGCCTGGAACCCATTGCTGAGGAACCAGCCCTGGGCCCTGGCCTCCCGTTAC
AGGCAGCTGTCCCCACAGGTCCATCTCAGGAAGGGCCCCAGTGCCCTGTAGGACAGGGAGCCAA
AGTGACCGGCCCCCAGCAGACGTCTCTGGGAGCTTCTGGAACCCTCCAGCTCAGGACTGGGGGC
GATAGGGAAAAGGAAGAGCCACCTCTCAGGCCACACAACGGTGGGATTCCCCACGGGCCACGTG
AGGGGACATCTGGAAGACAGACAGACAGCAAGAGCCGCTCCTGGGCCCCGGGCCACTTGCCAGT
GGTTAGGAGGGCCAAGAGTGAGGGCCAGGTGCTCTCGGAGCTCTCTCCCACACCTGCAGTATAC
TCGGATGCTACAGGCTCTGACAGGTTATGGCAGCGGCTGGAGCCTGGGAGTCACAGGGACAGTG
TCTCCTCATCCTCCAGCATGTCCTCCAATGACACTGTCATAGACCTCTCATTGCCCAGCCTCGG
CCTCTGCCGCAGTCGAGAGAGCATTCCAGGGGTCTCTCTTGGACGCCTAACCCCACGGCCCTGC
TTAGCCTCAGCTGCCCGTCCTGACCTGCCTCCTGTGACCAAGAGCAAATCCAACCCCAACCTGC
GGGTTGCGGGTGGGTTGCCTCTTGCACCCGATGAGCTGCAGCCCCGGCCTCTTGCCCCACGGCT
GACTGGGCTCCACTCACGGCCACCCTGGCATCACCTCACCCTGGTGGGCCTGAGGGACTGCCCA
GTGTCTGCTAAGTCCAAGAGTCTGGGAGACCTGACGGCTGACGACTTTGGTCCCAGCTTTCAGG
GCAGCACGGGCAGCCTGAGCTGCGGCCTGAGCCCCCTGGGTGTGGTGCATCAGGTGCTGGAGCC
GGGGAGGAGGCGAGATGCTCTCACAGAGCAGCTACGCTGGCTCACCGGCTTCCAGCATGCGGGG
GACATCACATCACCCACCAGCTTGGGCCCAGCTGCGGATGGCTCTGTAGGGGGTCCCAGCTTCC
TGAGACGTTCCTCCTCGCGCAGCCAGAGCCGAGTGCGTGCTATTGCCAGCCGAGCCCGCCAAGC
TCAGGAGCGCCAGCAGAGGCTGAGAGGCCTGGACTCACGGGGTCCCCCAGAGGAGGAGCGGGGC
ACCCCTGAGGGTGCCTGTTCTGTAGGCCACGAGGGCTGTGTGGATGTGCCAATGCCTGCCAAGG
GAGCCCCTGAGCAGGTGTGTGGTGCTGCTGATGACCAACTGCTGCTCAGGCTCTGACTCTGCCT
GATGACTCCAACTCCCTACCTTCCCTGTGACTGCTGGCCGGGGTGGGTGGGGGTGGGGCTGGCC
TCAACCCGACCTTTGCTCAGGAAATGAAGCCACTGGGTCCCCGAAGCTGTTATGCCCCACTCGC
CGCCTCTGGAGCACCCAGTAGCCCCCTCTTCAACCTTTGGCTGTCCTCTTGTCTCTGATCCTGG
GAAGTGAGGAACAGCACTGTCCACCTGTCCTACTGGGCAGTTTCCACATTTTAAGATATTTAAC
TTTTTAGAACCAAAAACTTACAAATGACTCTGCGTCCTTTCCCACTGGTCTGCCTGGTGTGTGC
TGAGTGTTATCTTCCACCAGCTGTGTGCTTGTATCCCAGGATGCCTGTGACACACCCACAACTG
CTAGGATGTTTGTCCCTGCACCCTACTCCACTGTGCACAAACTGCCCAGCAATTGTGTAAACTT
GGGAACACAACTCCAATAAATGCATCAGGCCTGTTC

hide sequence

RefSeq Acc Id:

XM_017593888 ⟹ XP_017449377

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,828,214 - 170,884,968 (-)	NCBI
mRatBN7.2	5	165,545,873 - 165,602,701 (-)	NCBI
Rnor_6.0	5	172,388,109 - 172,444,812 (-)	NCBI

Sequence:

show sequence

TGCGGGCGGAGAGCAATGACCTCCCTCTCAGCTCTGCTTTGGCTGCGTGGAGCAGCCTCGAGAT
GTGGGAAGCGCTCTCAGCCCCGCCCCCTCCTGGTCCAAGGCTCCGGCCACGCAGAGGCGAGGGG
GGAGGCTGCGGGTGCTTCTTTGCAGAAAGAGTACTTTGGTTGCGGCGGGGCGCGGGGCGGGTGC
TGGCCCCGCTGTCCTCCTGGCTCCCAGTCTCTGCGCGTTGCGCTTGCCCGCGGTTCCACGTCGC
GTCCCGCTCTACGCGCAGCGCTGCCGGGCCCCCCGGCCCCCTCCCAGCGCGGGGCGGGCAGGGG
GTGTGGTGCGGGCGGCACGAGTGACAGCGCGCTCCTCGCGCGGCGCCTCCACGGGGCTCAGTGT
CACAGCGCCGAACGCGCTGCGCGCACAGTCCGCCGCGGGTCGCCAGCCCTGGCAAAGCGATGTC
CTCGGAGCCTTAGCCTCAGTCAGAGCCAGGCCACTGACCACCCGAGTCCTCGCCCTCGTGGCCA
CCTCGCTGCTGTCAACGCGGAGACAATGGACGCGGGAGCCGCCCCGCAGAAGCACATGGAACGA
TGCATGAGTGCCATGCAGGAGGGGACCCAGATGGTGAAGCTCCGTGGCAGCTCCAAGGGCTTGG
TCCGCTTCTACTACCTGGATGAGCACCGTTCCTGCCTCCGCTGGCGGCCCTCACGCAAGAACGA
GAAAGCCAAGATTTCCATCGACTCCATCCAGGAGGTGAGTGAGGGCCGGCAGTCTGAAATCTTC
CAGCGCTACCCGGACAGCAGCTTTGACCCCAACTGTTGCTTCAGCATCTACTACGGCAGCCACC
GAGAGTCGCTGGACTTGGTCTCACCAAGCAGTGAAGAGGCACGTACCTGGGTCACCGGCCTTCG
CTACCTCATGGCTGGCATCAGCGACGAAGACAGCCTAGCCCGTCGCCAGCGTACCAGGGACCAG
TGGCTGAAGCAGACGTTTGATGAGGCTGACAAGAACGGTGACGGTAGCCTGAGCATCAGCGAGG
TCCTGCAGCTGCTACATAAACTCAACGTGAACCTGCCCCGGCAGAGGGTGAAACAGATGTTCAG
GGAGGCAGACACAGATGACCATCAGGGGACACTAGGCTTTGAGGAATTCTGCGCCTTCTACAAG
ATGATGTCCACTCGCCGAGACCTCTACCTGCTCATGCTGACCTACAGCAACCATAAGGACCACT
TGGATGCCTCCGACCTGCAGCGCTTTCTGGAGGTGGAGCAGAAGATGAGCGGCGTGACGCTCGA
GAGCTGTCAGAGCATCATCGAGCAATTTGAGCCTTGTCTGGAGAATAAGAGCAAAGGGGTGTTG
GGGATTGATGGCTTTACCAACTACACGCGGAGCCCCGCCGGTGACATCTTCAACCCTGAGCACC
ACAGAGTGCACCAAGACATGACGCAGCCTCTGAGTCACTACTTCATCACCTCCTCCCACAACAC
CTACCTCGTGGGTGACCAGCTCATGTCCCAGTCTCGGGTGGACATGTATGCCTGGGTCCTGCAG
GCCGGCTGCCGCTGTGTGGAGGTGGACTGCTGGGATGGGCCTGATGGGGAACCCATTGTCCACC
ATGGCTACACTCTGACCTCCAAGATCCTTTTCAAAGATGTCATCGAAACCATCAACAAATATGC
CTTCATCAAGAATGAGTACCCAGTGATCCTGTCCATTGAGAACCACTGTAGTGTTGTTCAGCAG
AAAAAGATGGCCCAGTATCTCACTGACATCCTTGGAGACAAGCTGGACCTCTCCTCAGTGAGCG
GCGAAGATGCCACCATGCTTCCTTCTCCACAGATGCTCAAGGGCAAGATCCTGGTGAAGGGGAA
GAAGCTCCCTGCCAATATCAGTGAGGATGCAGAAGAAGGTGAAGTGTCTGATGAGGACAGTGCC
GATGAGATTGAGGATGATTGCAAGCTCCTCAACGGAGACGCCTCCACCAATCGGAAGCGTGTGG
AAAACATCGCTAAGAAGAAGTTGGATTCTCTGATCAAGGAGTCAAAGATCCGTGACTGTGAAGA
CCCCAATGACTTCACTGTCTCCACACTGTCCCCATCTGGGAAGCTTGGGCACAAAGCAGAGGCC
AAGAAGGCTCAGAGCAAGGCCGAGGAAGATGTGGAGTCTGGGGAGGACACCGGGGTGAGCAGGC
GGAACAGCCGTCTCCTCATGAGCAGCTTCTCCAAGCGTAAGAAAAAAGGCAGCAAGATAAAGAA
GGTGGCCAGCGTGGAGGAGGGGGATGAGAGCCTGGACTCCCCAGGAAGCCAGAGCCGTGGGACT
GCCCGGCAAAAGAAGACCATGAAGCTGTCACGAGCCCTCTCGGACCTAGTGAAATATACCAAGT
CTGTGGGAACCCATGACGTGGAAATGGAGGTGGTATCTAGCTGGCAAGTGTCGTCCTTCAGCGA
GACCAAGGCCCACCAGATCCTGCAGCAGAAGCCTGCCCAGTACCTGCGCTTTAACCAGCACCAG
CTCTCCCGCATATACCCCTCCTCCTACCGGGTGGACTCCAGCAACTACAATCCACAACCCTTCT
GGAATGCTGGTTGCCAGATGGTTGCCCTGAACTACCAGTCGGAGGGGCGGATGCTGCAGCTGAA
CAGGGCAAAGTTCAGTGCCAACGGTGGCTGTGGCTACGTGCTCAAACCCCAATGCATGTGCCAG
GGTGTTTTCAACCCCAACTCTGAGGACCCCTTGCCAGGGCAGCTCAAGAAGCAGCTGGCCCTGA
GGATCATTAGTGGCCAGCAGCTGCCCAAGCCTCGGGACTCGGTGCTGGGTGACCGTGGGGAGAT
CATCGACCCCTTCGTGGAGGTGGAGGTCATCGGGCTCCCCGTGGACTGCAGCAAGGAGCAGACC
AGAGTGGTGGATGACAATGGGTTCAACCCCATGTGGGAGGAGACACTGGTGTTCACTGTACACA
TGCCCGAGATTGCGCTTGTGCGCTTCCTGGTCTGGGACCACGACCCGATTGGACGGGACTTCAT
CGGCCAGAGGACGCTGGCCTTTAGCAGCATGATGCCAGGCTACCGGCACGTGTACCTAGAAGGC
ATGGAGGAGGCCTCCATCTTTGTACATGTGGCCGTCAGTGACATCAGTGGTAAGGTCAAGCAGA
CTCTGGGTCTAAAAGGTCTCTTCCTCCGAGGCCCAAAGCCAGGCTCACTGGACAGTCATGCTGC
TGGGCAGCCCCTGCCCCGGCCCTCCGTTAGCCAGAGGCTCCTGCGGCGCACAGCCAGTGCCCCA
ACCAAGAGCCAGAAGCCAAGTCGCAAGGGCTTCCCAGAGCTGGCCCTGGGCACACAGGACGCAG
GCTCCGAGGGGGCGGCTGACGACGTGGCACCCCCTAGCCCCAACCCAGCTCTGGAGGCCCCTAC
TCAAGAGAGGTCAGGCAGCAGCAGTCCCCGAGGTAAGGCACCAGCTGGAGAAGCAACAGAAGAG
AGAACACCGGCACAGGTGCGGTCCCCGCGTGCCCCCGAAGGCCCCGGACCTGCAGGGATGGCCG
CCACATGCATGAAGTGTGTGGTGGGCTCCTGCACCGGTATGGACGTTGAGGGCCTTCGAAGGGA
GCAGCAACCCAGTCCTGGGCCTGCAGGCAGCCGCACGGCCATCAGCCAGCAGCCCAGGGCCCGG
GTAGATTCACTGGGGGGCCCTTGCTGCAGCCTGAGTCCTCGAGCCACCCCAGGGAGAAGCAGAG
AGGCCCCTAAGGGTCCTAGGGCTCGGCGGCAGGGTCCAGGTGGCAGCTCTGTGTCCTCCGACTC
CAGCAGCCCAGACAGCCCAGGCAGCCCCAAGGTGGCCCCCTGCCAGCCAGAGGGTGCTCACAGG
CAGCAGGGGGCGCTGCAGGGAGAGATGAACGCCTTGTTCGTTCAAAAGCTGGAGGAGATCAGGA
GTCATTCCCCCATGTTCTCCACGGTTAGGGATTGAGACCTGCGAGTGCCAGACACTCGCCTCTT
CCCCCTGCAGCGGCCCATCTCCCCCCTGTGCAGCCTGGAACCCATTGCTGAGGAACCAGCCCTG
GGCCCTGGCC

hide sequence

RefSeq Acc Id:

XM_017593891 ⟹ XP_017449380

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,828,214 - 170,884,968 (-)	NCBI
mRatBN7.2	5	165,545,873 - 165,602,699 (-)	NCBI
Rnor_6.0	5	172,388,109 - 172,444,812 (-)	NCBI

Sequence:

show sequence

TGCGGGCGGAGAGCAATGACCTCCCTCTCAGCTCTGCTTTGGCTGCGTGGAGCAGCCTCGAGAT
GTGGGAAGCGCTCTCAGCCCCGCCCCCTCCTGGTCCAAGGCTCCGGCCACGCAGAGGCGAGGGG
GGAGGCTGCGGGTGCTTCTTTGCAGAAAGAGTACTTTGGTTGCGGCGGGGCGCGGGGCGGGTGC
TGGCCCCGCTGTCCTCCTGGCTCCCAGTCTCTGCGCGTTGCGCTTGCCCGCGGTTCCACGTCGC
GTCCCGCTCTACGCGCAGCGCTGCCGGGCCCCCCGGCCCCCTCCCAGCGCGGGGCGGGCAGGGG
GTGTGGTGCGGGCGGCACGAGTGACAGCGCGCTCCTCGCGCGGCGCCTCCACGGGGCTCAGTGT
CACAGCGCCGAACGCGCTGCGCGCACAGTCCGCCGCGGGTCGCCAGCCCTGGCAAAGCGATGTC
CTCGGAGCCTTAGCCTCAGTCAGAGCCAGGCCACTGACCACCCGAGTCCTCGCCCTCGTGGCCA
CCTCGCTGCTGTCAACGCGGAGACAATGGACGCGGGAGCCGCCCCGCAGAAGCACATGGAACGA
TGCATGAGTGCCATGCAGGAGGGGACCCAGATGGTGAAGCTCCGTGGCAGCTCCAAGGGCTTGG
TCCGCTTCTACTACCTGGATGAGCACCGTTCCTGCCTCCGCTGGCGGCCCTCACGCAAGAACGA
GAAAGCCAAGATTTCCATCGACTCCATCCAGGAGGTGAGTGAGGGCCGGCAGTCTGAAATCTTC
CAGCGCTACCCGGACAGCAGCTTTGACCCCAACTGTTGCTTCAGCATCTACTACGGCAGCCACC
GAGAGTCGCTGGACTTGGTCTCACCAAGCAGTGAAGAGGCACGTACCTGGGTCACCGGCCTTCG
CTACCTCATGGCTGGCATCAGCGACGAAGACAGCCTAGCCCGTCGCCAGCGTACCAGGGACCAG
TGGCTGAAGCAGACGTTTGATGAGGCTGACAAGAACGGTGACGGTAGCCTGAGCATCAGCGAGG
TCCTGCAGCTGCTACATAAACTCAACGTGAACCTGCCCCGGCAGAGGGTGAAACAGATGTTCAG
GGAGGCAGACACAGATGACCATCAGGGGACACTAGGCTTTGAGGAATTCTGCGCCTTCTACAAG
ATGATGTCCACTCGCCGAGACCTCTACCTGCTCATGCTGACCTACAGCAACCATAAGGACCACT
TGGATGCCTCCGACCTGCAGCGCTTTCTGGAGGTGGAGCAGAAGATGAGCGGCGTGACGCTCGA
GAGCTGTCAGAGCATCATCGAGCAATTTGAGCCTTGTCTGGAGAATAAGAGCAAAGGGGTGTTG
GGGATTGATGGCTTTACCAACTACACGCGGAGCCCCGCCGGTGACATCTTCAACCCTGAGCACC
ACAGAGTGCACCAAGACATGACGCAGCCTCTGAGTCACTACTTCATCACCTCCTCCCACAACAC
CTACCTCGTGGGTGACCAGCTCATGTCCCAGTCTCGGGTGGACATGTATGCCTGGGTCCTGCAG
GCCGGCTGCCGCTGTGTGGAGGTGGACTGCTGGGATGGGCCTGATGGGGAACCCATTGTCCACC
ATGGCTACACTCTGACCTCCAAGATCCTTTTCAAAGATGTCATCGAAACCATCAACAAATATGC
CTTCATCAAGAATGAGTACCCAGTGATCCTGTCCATTGAGAACCACTGTAGTGTTGTTCAGCAG
AAAAAGATGGCCCAGTATCTCACTGACATCCTTGGAGACAAGCTGGACCTCTCCTCAGTGAGCG
GCGAAGATGCCACCATGCTTCCTTCTCCACAGATGCTCAAGGGCAAGATCCTGGTGAAGGGGAA
GAAGCTCCCTGCCAATATCAGTGAGGATGCAGAAGAAGGTGAAGTGTCTGATGAGGACAGTGCC
GATGAGATTGAGGATGATTGCAAGCTCCTCAACGGAGACGCCTCCACCAATCGGAAGCGTGTGG
AAAACATCGCTAAGAAGAAGTTGGATTCTCTGATCAAGGAGTCAAAGATCCGTGACTGTGAAGA
CCCCAATGACTTCACTGTCTCCACACTGTCCCCATCTGGGAAGCTTGGGCACAAAGCAGAGGCC
AAGAAGGCTCAGAGCAAGGCCGAGGAAGATGTGGAGTCTGGGGAGGACACCGGGGTGAGCAGGC
GGAACAGCCGTCTCCTCATGAGCAGCTTCTCCAAGCGTAAGAAAAAAGGCAGCAAGATAAAGAA
GGTGGCCAGCGTGGAGGAGGGGGATGAGAGCCTGGACTCCCCAGGAAGCCAGAGCCGTGGGACT
GCCCGGCAAAAGAAGACCATGAAGCTGTCACGAGCCCTCTCGGACCTAGTGAAATATACCAAGT
CTGTGGGAACCCATGACGTGGAAATGGAGGTGGTATCTAGCTGGCAAGTGTCGTCCTTCAGCGA
GACCAAGGCCCACCAGATCCTGCAGCAGAAGCCTGCCCAGTACCTGCGCTTTAACCAGCACCAG
CTCTCCCGCATATACCCCTCCTCCTACCGGGTGGACTCCAGCAACTACAATCCACAACCCTTCT
GGAATGCTGGTTGCCAGATGGTTGCCCTGAACTACCAGTCGGAGGGGCGGATGCTGCAGCTGAA
CAGGGCAAAGTTCAGTGCCAACGGTGGCTGTGGCTACGTGCTCAAACCCCAATGCATGTGCCAG
GGTGTTTTCAACCCCAACTCTGAGGACCCCTTGCCAGGGCAGCTCAAGAAGCAGCTGGCCCTGA
GGATCATTAGTGGCCAGCAGCTGCCCAAGCCTCGGGACTCGGTGCTGGGTGACCGTGGGGAGAT
CATCGACCCCTTCGTGGAGGTGGAGGTCATCGGGCTCCCCGTGGACTGCAGCAAGGAGCAGACC
AGAGTGGTGGATGACAATGGGTTCAACCCCATGTGGGAGGAGACACTGGTGTTCACTGTACACA
TGCCCGAGATTGCGCTTGTGCGCTTCCTGGTCTGGGACCACGACCCGATTGGACGGGACTTCAT
CGGCCAGAGGACGCTGGCCTTTAGCAGCATGATGCCAGGCTACCGGCACGTGTACCTAGAAGGC
ATGGAGGAGGCCTCCATCTTTGTACATGTGGCCGTCAGTGACATCAGTGGTAAGGTCAAGCAGA
CTCTGGGTCTAAAAGGTCTCTTCCTCCGAGGCCCAAAGCCAGGCTCACTGGACAGTCATGCTGC
TGGGCAGCCCCTGCCCCGGCCCTCCGTTAGCCAGAGGCTCCTGCGGCGCACAGCCAGTGCCCCA
ACCAAGAGCCAGAAGCCAAGTCGCAAGGGCTTCCCAGAGCTGGCCCTGGGCACACAGGACGCAG
GCTCCGAGGGGGCGGCTGACGACGTGGCACCCCCTAGCCCCAACCCAGCTCTGGAGGCCCCTAC
TCAAGAGAGGTCAGGCAGCAGCAGTCCCCGAGTTAGGGATTGAGACCTGCGAGTGCCAGACACT
CGCCTCTTCCCCCTGCAGCGGCCCATCTCCCCCCTGTGCAGCCTGGAACCCATTGCTGAGGAAC
CAGCCCTGGGCCCTGGCC

hide sequence

RefSeq Acc Id:

XM_039111372 ⟹ XP_038967300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,830,366 - 170,885,012 (-)	NCBI
mRatBN7.2	5	165,547,935 - 165,602,702 (-)	NCBI

RefSeq Acc Id:

XM_039111373 ⟹ XP_038967301

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,830,111 - 170,884,968 (-)	NCBI
mRatBN7.2	5	165,547,774 - 165,602,698 (-)	NCBI

RefSeq Acc Id:

XR_005505150

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	170,828,214 - 170,884,968 (-)	NCBI
mRatBN7.2	5	165,545,637 - 165,602,703 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001413979	(Get FASTA)	NCBI Sequence Viewer
	NP_001413980	(Get FASTA)	NCBI Sequence Viewer
	XP_008762618	(Get FASTA)	NCBI Sequence Viewer
	XP_017449377	(Get FASTA)	NCBI Sequence Viewer
	XP_017449380	(Get FASTA)	NCBI Sequence Viewer
	XP_038967300	(Get FASTA)	NCBI Sequence Viewer
	XP_038967301	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL81282	(Get FASTA)	NCBI Sequence Viewer
	EDL81283	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000019096
	ENSRNOP00000019096.7
	ENSRNOP00000080174.1
	ENSRNOP00000086635.1
	ENSRNOP00000095956
	ENSRNOP00000095956.1

RefSeq Acc Id:	XP_008762618 ⟸ XM_008764396
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6GLE1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSLSALLWLRGAASRCGKRSQPRPLLVQGSGHAEARGEAAGASLQKEYFGCGGARGGCWPRCP PGSQSLRVALARGSTSRPALRAALPGPPAPSQRGAGRGCGAGGTSDSALLARRLHGAQCHSAER AARTVRRGSPALAKRCPRSLSLSQSQATDHPSPRPRGHLAAVNAETMDAGAAPQKHMERCMSAM QEGTQMVKLRGSSKGLVRFYYLDEHRSCLRWRPSRKNEKAKISIDSIQEVSEGRQSEIFQRYPD SSFDPNCCFSIYYGSHRESLDLVSPSSEEARTWVTGLRYLMAGISDEDSLARRQRTRDQWLKQT FDEADKNGDGSLSISEVLQLLHKLNVNLPRQRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTR RDLYLLMLTYSNHKDHLDASDLQRFLEVEQKMSGVTLESCQSIIEQFEPCLENKSKGVLGIDGF TNYTRSPAGDIFNPEHHRVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRC VEVDCWDGPDGEPIVHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVVQQKKMAQ YLTDILGDKLDLSSVSGEDATMLPSPQMLKGKILVKGKKLPANISEDAEEGEVSDEDSADEIED DCKLLNGDASTNRKRVENIAKKKLDSLIKESKIRDCEDPNDFTVSTLSPSGKLGHKAEAKKAQS KAEEDVESGEDTGVSRRNSRLLMSSFSKRKKKGSKIKKVASVEEGDESLDSPGSQSRGTARQKK TMKLSRALSDLVKYTKSVGTHDVEMEVVSSWQVSSFSETKAHQILQQKPAQYLRFNQHQLSRIY PSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSANGGCGYVLKPQCMCQGVFNP NSEDPLPGQLKKQLALRIISGQQLPKPRDSVLGDRGEIIDPFVEVEVIGLPVDCSKEQTRVVDD NGFNPMWEETLVFTVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMPGYRHVYLEGMEEAS IFVHVAVSDISGKVKQTLGLKGLFLRGPKPGSLDSHAAGQPLPRPSVSQRLLRRTASAPTKSQK PSRKGFPELALGTQDAGSEGAADDVAPPSPNPALEAPTQERSGSSSPRDTRLFPLQRPISPLCS LEPIAEEPALGPGLPLQAAVPTGPSQEGPQCPVGQGAKVTGPQQTSLGASGTLQLRTGGDREKE EPPLRPHNGGIPHGPREGTSGRQTDSKSRSWAPGHLPVVRRAKSEGQVLSELSPTPAVYSDATG SDRLWQRLEPGSHRDSVSSSSSMSSNDTVIDLSLPSLGLCRSRESIPGVSLGRLTPRPCLASAA RPDLPPVTKSKSNPNLRVAGGLPLAPDELQPRPLAPRLTGLHSRPPWHHLTLVGLRDCPVSAKS KSLGDLTADDFGPSFQGSTGSLSCGLSPLGVVHQVLEPGRRRDALTEQLRWLTGFQHAGDITSP TSLGPAADGSVGGPSFLRRSSSRSQSRVRAIASRARQAQERQQRLRGLDSRGPPEEERGTPEGA CSVGHEGCVDVPMPAKGAPEQVCGAADDQLLLRL hide sequence

RefSeq Acc Id:	XP_017449380 ⟸ XM_017593891
- Peptide Label:	isoform X3
- UniProtKB:	D4AAX6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSLSALLWLRGAASRCGKRSQPRPLLVQGSGHAEARGEAAGASLQKEYFGCGGARGGCWPRCP PGSQSLRVALARGSTSRPALRAALPGPPAPSQRGAGRGCGAGGTSDSALLARRLHGAQCHSAER AARTVRRGSPALAKRCPRSLSLSQSQATDHPSPRPRGHLAAVNAETMDAGAAPQKHMERCMSAM QEGTQMVKLRGSSKGLVRFYYLDEHRSCLRWRPSRKNEKAKISIDSIQEVSEGRQSEIFQRYPD SSFDPNCCFSIYYGSHRESLDLVSPSSEEARTWVTGLRYLMAGISDEDSLARRQRTRDQWLKQT FDEADKNGDGSLSISEVLQLLHKLNVNLPRQRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTR RDLYLLMLTYSNHKDHLDASDLQRFLEVEQKMSGVTLESCQSIIEQFEPCLENKSKGVLGIDGF TNYTRSPAGDIFNPEHHRVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRC VEVDCWDGPDGEPIVHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVVQQKKMAQ YLTDILGDKLDLSSVSGEDATMLPSPQMLKGKILVKGKKLPANISEDAEEGEVSDEDSADEIED DCKLLNGDASTNRKRVENIAKKKLDSLIKESKIRDCEDPNDFTVSTLSPSGKLGHKAEAKKAQS KAEEDVESGEDTGVSRRNSRLLMSSFSKRKKKGSKIKKVASVEEGDESLDSPGSQSRGTARQKK TMKLSRALSDLVKYTKSVGTHDVEMEVVSSWQVSSFSETKAHQILQQKPAQYLRFNQHQLSRIY PSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSANGGCGYVLKPQCMCQGVFNP NSEDPLPGQLKKQLALRIISGQQLPKPRDSVLGDRGEIIDPFVEVEVIGLPVDCSKEQTRVVDD NGFNPMWEETLVFTVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMPGYRHVYLEGMEEAS IFVHVAVSDISGKVKQTLGLKGLFLRGPKPGSLDSHAAGQPLPRPSVSQRLLRRTASAPTKSQK PSRKGFPELALGTQDAGSEGAADDVAPPSPNPALEAPTQERSGSSSPRVRD hide sequence

RefSeq Acc Id:	XP_017449377 ⟸ XM_017593888
- Peptide Label:	isoform X2
- UniProtKB:	D4AAX6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTSLSALLWLRGAASRCGKRSQPRPLLVQGSGHAEARGEAAGASLQKEYFGCGGARGGCWPRCP PGSQSLRVALARGSTSRPALRAALPGPPAPSQRGAGRGCGAGGTSDSALLARRLHGAQCHSAER AARTVRRGSPALAKRCPRSLSLSQSQATDHPSPRPRGHLAAVNAETMDAGAAPQKHMERCMSAM QEGTQMVKLRGSSKGLVRFYYLDEHRSCLRWRPSRKNEKAKISIDSIQEVSEGRQSEIFQRYPD SSFDPNCCFSIYYGSHRESLDLVSPSSEEARTWVTGLRYLMAGISDEDSLARRQRTRDQWLKQT FDEADKNGDGSLSISEVLQLLHKLNVNLPRQRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTR RDLYLLMLTYSNHKDHLDASDLQRFLEVEQKMSGVTLESCQSIIEQFEPCLENKSKGVLGIDGF TNYTRSPAGDIFNPEHHRVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRC VEVDCWDGPDGEPIVHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVVQQKKMAQ YLTDILGDKLDLSSVSGEDATMLPSPQMLKGKILVKGKKLPANISEDAEEGEVSDEDSADEIED DCKLLNGDASTNRKRVENIAKKKLDSLIKESKIRDCEDPNDFTVSTLSPSGKLGHKAEAKKAQS KAEEDVESGEDTGVSRRNSRLLMSSFSKRKKKGSKIKKVASVEEGDESLDSPGSQSRGTARQKK TMKLSRALSDLVKYTKSVGTHDVEMEVVSSWQVSSFSETKAHQILQQKPAQYLRFNQHQLSRIY PSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSANGGCGYVLKPQCMCQGVFNP NSEDPLPGQLKKQLALRIISGQQLPKPRDSVLGDRGEIIDPFVEVEVIGLPVDCSKEQTRVVDD NGFNPMWEETLVFTVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMPGYRHVYLEGMEEAS IFVHVAVSDISGKVKQTLGLKGLFLRGPKPGSLDSHAAGQPLPRPSVSQRLLRRTASAPTKSQK PSRKGFPELALGTQDAGSEGAADDVAPPSPNPALEAPTQERSGSSSPRGKAPAGEATEERTPAQ VRSPRAPEGPGPAGMAATCMKCVVGSCTGMDVEGLRREQQPSPGPAGSRTAISQQPRARVDSLG GPCCSLSPRATPGRSREAPKGPRARRQGPGGSSVSSDSSSPDSPGSPKVAPCQPEGAHRQQGAL QGEMNALFVQKLEEIRSHSPMFSTVRD hide sequence

Ensembl Acc Id:

ENSRNOP00000019096 ⟸ ENSRNOT00000019096

RefSeq Acc Id:	XP_038967301 ⟸ XM_039111373
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038967300 ⟸ XM_039111372
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000095956 ⟸ ENSRNOT00000115181

Ensembl Acc Id:

ENSRNOP00000086635 ⟸ ENSRNOT00000097454

Ensembl Acc Id:

ENSRNOP00000080174 ⟸ ENSRNOT00000115681

RefSeq Acc Id:	NP_001413980 ⟸ NM_001427051
- Peptide Label:	isoform 2
- UniProtKB:	D4AAX6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001413979 ⟸ NM_001427050
- Peptide Label:	isoform 1
- UniProtKB:	A0A8I6GLE1 (UniProtKB/TrEMBL)

Protein Domains

C2 EF-hand PH PI-PLC Y-box

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AAX6-F1-model_v2	AlphaFold	D4AAX6	1-1137	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694325

Promoter ID:

EPDNEW_R4840

Type:

initiation region

Name:

Plch2_1

Description:

phospholipase C, eta 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	172,424,057 - 172,424,117	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304675	AgrOrtholog
BioCyc Gene	G2FUF-38941	BioCyc
BioCyc Pathway	PWY-6351 [D-myo-inositol (1,4,5)-trisphosphate biosynthesis]	BioCyc
	PWY-6367 [D-myo-inositol-5-phosphate metabolism]	BioCyc
	PWY-8052 [2-arachidonoylglycerol biosynthesis]	BioCyc
BioCyc Pathway Image	PWY-6351	BioCyc
	PWY-6367	BioCyc
	PWY-8052	BioCyc
Ensembl Genes	ENSRNOG00000014226	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000019096	ENTREZGENE
	ENSRNOT00000019096.8	UniProtKB/TrEMBL
	ENSRNOT00000097454.1	UniProtKB/TrEMBL
	ENSRNOT00000115181	ENTREZGENE
	ENSRNOT00000115181.1	UniProtKB/TrEMBL
	ENSRNOT00000115681.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.29.30	UniProtKB/TrEMBL
	2.60.40.150	UniProtKB/TrEMBL
	3.20.20.190	UniProtKB/TrEMBL
	EF-hand	UniProtKB/TrEMBL
InterPro	C2_Ca-dep	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	EF-hand-like_dom	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_Ca-bd	UniProtKB/TrEMBL
	PH_like_dom	UniProtKB/TrEMBL
	Pinositol_PLipase_C	UniProtKB/TrEMBL
	PLC-eta2	UniProtKB/TrEMBL
	PLC-eta2_EFh	UniProtKB/TrEMBL
	PLC-like_Pdiesterase_TIM-brl	UniProtKB/TrEMBL
	Pleckstrin_homology	UniProtKB/TrEMBL
	PLipase_C_EF-hand-like	UniProtKB/TrEMBL
	PLipase_C_PInositol-sp_X_dom	UniProtKB/TrEMBL
	PLipase_C_Pinositol-sp_Y	UniProtKB/TrEMBL
NCBI Gene	313756	ENTREZGENE
PANTHER	PTHR10336	UniProtKB/TrEMBL
	PTHR10336:SF166	UniProtKB/TrEMBL
Pfam	efhand_like	UniProtKB/TrEMBL
	PF00168	UniProtKB/TrEMBL
	PH_12	UniProtKB/TrEMBL
	PI-PLC-X	UniProtKB/TrEMBL
	PI-PLC-Y	UniProtKB/TrEMBL
PhenoGen	Plch2	PhenoGen
PRINTS	PHPHLIPASEC	UniProtKB/TrEMBL
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/TrEMBL
	PIPLC_X_DOMAIN	UniProtKB/TrEMBL
	PIPLC_Y_DOMAIN	UniProtKB/TrEMBL
	PS50004	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000014226	RatGTEx
SMART	EFh	UniProtKB/TrEMBL
	PLCXc	UniProtKB/TrEMBL
	PLCYc	UniProtKB/TrEMBL
	SM00233	UniProtKB/TrEMBL
	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	PLC-like_Pdiesterase_TIM-brl	UniProtKB/TrEMBL
	SSF47473	UniProtKB/TrEMBL
	SSF49562	UniProtKB/TrEMBL
UniProt	A0A8I5ZPH5_RAT	UniProtKB/TrEMBL
	A0A8I6GE85_RAT	UniProtKB/TrEMBL
	A0A8I6GLE1	ENTREZGENE, UniProtKB/TrEMBL
	D4AAX6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Plch2	phospholipase C, eta 2	RGD1304675_predicted	similar to FLJ00414 protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1304675_predicted	similar to FLJ00414 protein (predicted)	LOC313756_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC313756_predicted	similar to FLJ00414 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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