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Gene: Usp54 (ubiquitin specific peptidase 54) Rattus norvegicus
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Symbol: Usp54
Name: ubiquitin specific peptidase 54
Description: Predicted to have thiol-dependent ubiquitinyl hydrolase activity. Predicted to be involved in protein deubiquitination. Orthologous to human USP54 (ubiquitin specific peptidase 54); INTERACTS WITH 1,3-dinitrobenzene; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: inactive ubiquitin carboxyl-terminal hydrolase 54; inactive ubiquitin-specific peptidase 54; ubiquitin specific protease 54
Orthologs:
Homo sapiens (human) : USP54 (ubiquitin specific peptidase 54)  HGNC  Alliance
Mus musculus (house mouse) : Usp54 (ubiquitin specific peptidase 54)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Usp54 (ubiquitin specific peptidase 54)
Pan paniscus (bonobo/pygmy chimpanzee) : USP54 (ubiquitin specific peptidase 54)
Canis lupus familiaris (dog) : USP54 (ubiquitin specific peptidase 54)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Usp54 (ubiquitin specific peptidase 54)
Sus scrofa (pig) : USP54 (ubiquitin specific peptidase 54)
Chlorocebus sabaeus (African green monkey) : USP54 (ubiquitin specific peptidase 54)
Heterocephalus glaber (naked mole-rat) : Usp54 (ubiquitin specific peptidase 54)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0154,091,834 - 4,190,408 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl154,091,754 - 4,190,408 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0158,193,069 - 8,291,196 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4153,918,087 - 3,983,122 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1153,918,086 - 3,948,102 (+)NCBI
Celera15836,782 - 901,563 (-)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Usp54
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1303206
Created: 2004-12-03
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.