Neo1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 114,443,410 - 114,671,197 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 32,292,745 - 32,516,624 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 32,345,578 - 32,517,245 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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NEO1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 15 | 73,051,692 - 73,305,206 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 73,051,710 - 73,305,205 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 73,344,243 - 73,597,546 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 71,131,928 - 71,384,599 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 71,131,927 - 71,382,835 | NCBI | | | | | Celera | 15 | 50,287,439 - 50,476,112 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q24.1 | NCBI | | | | | HuRef | 15 | 50,240,408 - 50,428,957 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 73,462,785 - 73,715,509 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 70,868,937 - 71,122,333 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Neo1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 58,781,962 - 58,943,926 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 58,781,970 - 58,943,724 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 58,874,679 - 59,036,614 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 58,874,687 - 59,036,441 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 58,722,486 - 58,884,248 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 58,674,677 - 58,834,445 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 56,103,366 - 56,261,719 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | B | NCBI | | | | | cM Map | 9 | 31.81 | NCBI | | | | |
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Neo1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 8 | 68,169,711 - 68,322,158 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 59,273,860 - 59,426,486 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 59,275,569 - 59,430,348 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 8 | 63,649,871 - 63,756,394 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 63,653,266 - 63,750,531 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 63,417,857 - 63,524,875 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 62,681,481 - 62,789,841 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 62,702,413 - 62,806,918 (-) | NCBI | | | | | Celera | 8 | 58,729,882 - 58,837,487 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24 | NCBI | | | | |
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Neo1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955450 | 4,191,168 - 4,375,896 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955450 | 4,191,168 - 4,324,997 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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NEO1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 62,281,800 - 62,534,799 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 66,446,196 - 66,699,224 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 51,968,238 - 52,221,116 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 70,680,970 - 70,979,687 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 15 | 70,789,035 - 70,977,178 (+) | Ensembl | panpan1.1 | | panPan2 | |
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NEO1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 30 | 36,387,425 - 36,622,491 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 36,387,259 - 36,622,154 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 36,323,434 - 36,559,824 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 36,594,775 - 36,830,997 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 36,594,757 - 36,830,992 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 30 | 36,547,002 - 36,782,998 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 36,572,984 - 36,808,890 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 36,829,242 - 37,064,354 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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NEO1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 60,064,994 - 60,300,562 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 60,064,984 - 60,299,892 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 64,688,218 - 64,785,685 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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NEO1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 26 | 10,173,707 - 10,427,732 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 26 | 10,176,215 - 10,427,675 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 131,173,745 - 131,432,558 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Neo1 (Heterocephalus glaber - naked mole-rat) |
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