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Gene: Alpk1 (alpha kinase 1) Ictidomys tridecemlineatus

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Symbol:

Alpk1

Name:

alpha kinase 1

RGD ID:

12685428

Description:

ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); monosaccharide binding (inferred); INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH aniridia (ortholog); Axenfeld-Rieger syndrome type 1 (ortholog); diabetes mellitus (ortholog); FOUND IN photoreceptor connecting cilium (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

alpha-protein kinase 1

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ALPK1 (alpha kinase 1)	NCBI	Ortholog
Mus musculus (house mouse):	Alpk1 (alpha-kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Alpk1 (alpha-kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Alpk1 (alpha kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ALPK1 (alpha kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ALPK1 (alpha kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ALPK1 (alpha kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ALPK1 (alpha kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Alpk1 (alpha kinase 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	8,612,620 - 8,737,685 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936563	3,235,181 - 3,296,257 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936563	3,233,913 - 3,296,671 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

aniridia (ISO)

Axenfeld-Rieger syndrome type 1 (ISO)

diabetes mellitus (ISO)

Diabetic Nephropathies (ISO)

genetic disease (ISO)

gout (ISO)

nephrosclerosis (ISO)

Retinal Dystrophy, Optic Nerve Edema, Splenomegaly, Anhidrosis, and Migraine Headache Syndrome (ISO)

Weight Loss (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cilium assembly (IEA)

cytoplasmic pattern recognition receptor signaling pathway (IEA)

innate immune response (IEA)

positive regulation of canonical NF-kappaB signal transduction (IEA)

response to bacterium (ISO)

Cellular Component

centrosome (IEA)

ciliary basal body (IEA)

cilium (IEA)

cytosol (IEA)

photoreceptor connecting cilium (ISO)

spindle pole (IEA)

Molecular Function

ATP binding (IEA)

kinase activity (IEA)

monosaccharide binding (IEA)

protein binding (ISO)

protein serine/threonine kinase activity (IEA)

transferase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Alpk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	8,612,620 - 8,737,685 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936563	3,235,181 - 3,296,257 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936563	3,233,913 - 3,296,671 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ALPK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	112,297,369 - 112,442,621 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	112,285,509 - 112,442,621 (+)	Ensembl			hg38	GRCh38
GRCh37	4	113,218,525 - 113,363,777 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	113,437,948 - 113,583,223 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	4	113,656,455 - 113,720,433	NCBI
Celera	4	110,512,576 - 110,657,856 (+)	NCBI		Celera
Cytogenetic Map	4	q25	NCBI
HuRef	4	108,950,042 - 109,095,428 (+)	NCBI		HuRef
CHM1_1	4	113,195,311 - 113,340,525 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	115,605,712 - 115,750,965 (+)	NCBI		T2T-CHM13v2.0

Alpk1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	127,460,367 - 127,574,195 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	127,463,959 - 127,574,176 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	3	127,666,718 - 127,780,547 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	127,670,310 - 127,780,527 (-)	Ensembl			mm10	GRCm38
MGSCv37	3	127,373,228 - 127,483,445 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	3	127,662,332 - 127,772,549 (-)	NCBI		MGSCv36	mm8
Celera	3	134,160,957 - 134,282,674 (-)	NCBI		Celera
Cytogenetic Map	3	G2	NCBI
cM Map	3	56.54	NCBI

Alpk1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	218,801,425 - 218,924,013 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	2	218,780,189 - 218,921,646 (-)	Ensembl				GRCr8
mRatBN7.2	2	216,126,939 - 216,247,180 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	216,128,825 - 216,247,157 (-)	Ensembl				mRatBN7.2
Rnor_6.0	2	231,997,360 - 232,117,471 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	231,996,088 - 232,117,134 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	2	251,345,268 - 251,462,165 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	2	224,934,194 - 224,989,819 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	2	208,443,568 - 208,559,107 (-)	NCBI		Celera
RGSC_v3.1	2	224,888,846 - 224,988,527 (-)	NCBI
Cytogenetic Map	2	q42	NCBI

Alpk1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955457	14,325,281 - 14,379,937 (-)	Ensembl
ChiLan1.0	NW_004955457	14,325,278 - 14,444,368 (-)	NCBI	ChiLan1.0	ChiLan1.0

ALPK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	110,372,767 - 110,517,166 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	110,666,192 - 110,813,772 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	104,786,721 - 104,931,981 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	115,349,826 - 115,495,026 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	115,430,258 - 115,495,026 (+)	Ensembl			panPan2	panpan1.1

ALPK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	32	32,135,110 - 32,270,732 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	32	32,136,738 - 32,267,264 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	32	9,763,410 - 9,897,996 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	32	32,358,805 - 32,493,869 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	32	32,364,919 - 32,493,694 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	32	32,341,883 - 32,476,840 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	32	32,102,803 - 32,237,847 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	32	7,622,218 - 7,758,515 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

ALPK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	110,241,227 - 110,367,912 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	8	110,241,220 - 110,368,001 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	118,153,267 - 118,184,844 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ALPK1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	60,096,755 - 60,233,569 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	60,202,204 - 60,236,743 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	38,857,444 - 38,994,232 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Alpk1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624838	6,229,899 - 6,287,920 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624838	6,273,398 - 6,288,363 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021729661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040292989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000027399 ⟹ ENSSTOP00000021405

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936563	3,235,181 - 3,296,257 (+)	Ensembl

RefSeq Acc Id:

XM_021729661 ⟹ XP_021585336

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405301	8,612,620 - 8,737,685 (-)	NCBI
SpeTri2.0	NW_004936563	3,233,913 - 3,296,671 (+)	NCBI

Sequence:

show sequence

TCCTCAAGCTTTATTTTGGCAGTAAAGTGTATATAAATTCTTTAAAACCAAGGCCATTGGGTAA
CAGTGTACTTTTTAACCTTACACAATAATTCGCTGCTTGTATATTTTCAGTGATTACATCAGTT
ACAAGGATTAGCTCAGAAACAGAGAGACTGAAACCATCCAGGAATCTGTTACTGTCTTCTTTTT
CAGATTCTCATACTTTGATAATTCAATTCTATGTGCACTAGAAGAGTGTCTAAACCAGACAGAA
GCTCCCCTATCCATTCTGGGAAAGTCAGAGAGAGGATAATTTCCTTTGTTCTGTTTACAAGGTA
CTACTTTAATTAATGAAGATGAAAAAGAGATTTATTAATCAAAGAACTTTTTTCTATTTTTTGG
TCAAGAATTTTTGTACTTTCAGTGAGTTATTTTGGTCTCAAAATTGCCATGATTGCAATAGTTC
ATTACATCACACTAATATTTGCATGAGAAATCTCTCCAATGTTTGTACGTTACATGGCAACATA
AGTAGACTCTTCCATCTATACGATCGATTTACCCATACGATAGTACTAGGAAATTGGGTTTTCC
AGGGTATCACTTCTTTATTTTACTTGGCAGTGTGCCTGGCAGTGAAGAGTTTTAAATTCGACAT
CTGTCATTGCCTATCTTGGTCCAAATTATATCATGCTAAATAGCATGAAGAAGTCTGCACAGTC
AGGAAGTCAATAGGGGGTTATGAGTGGTAAACTTCATATTACTACATGCTTATGGGTGAACAGT
AGAACTGTCAGCCAGGTGCTTCCTGTAGATTTCCAGAAAGGTAGAAAGTGTAGTGCCACTGGGA
TCCAGAGGCACTGACATACATGAAGAATGCAGAAGATACATAAATCATGGCGGACATTCATTTC
ATTTGGCCCCGTGTGATTCCACCGACATCACTGTGGGTAACCGGGGTCTGCATGGGGACCCTCT
CCCTTCTGCACTCGATGCTTCTGAGGTGCTGCCAATCTAAACCAGACCCCGAAGTCATTTCACA
CACTTCCCTAATAATGTCCTCAGGGGCTGTCATGTATTTTCATGCGTTTGCCCTATTATCCCTC
CCGGCTTGAGTCTTACAGATAATTGATGATACTTCAGTTAATCATCTTTCTCCCTCTTTTGTTC
ACCAGGTACCTCAGCCTTCAAGGGTCTCCTTTATTGAGAATCGATGTCTTCTCCTAGGTAATTG
ATCACCATAGACCCAGGGACACTCGATTCATCGTCCGGGGAGGGTAATCATCATGAATAATCAA
AAAGCTGTAGCTGCAGTACTGCAAGAGTGCAAGCAAGTGCTGGACCAGCTCTTGTTGGAGGCGC
CAGATGTGTCAGAGGAGGACAAGAGCGAGGACCAGCGGTGCAGAGCTTCACTTCCCAGCGAGTT
AAGGACCCTGATCCAGGAGGCGAAGGAAATGAAGTGGCCCTTCGTGCCTGAAAAGTGGCAGTAC
AAACAAGCCATGAGCCCAGAGGACAAAACAAACCTGCAGGATGTGATTGGCGCCGGGTTGCAGC
AGTTACTGGCGTCCTTGCGAGCCTCCATCGTCGCTCAGGACTGTGCCGCCGCGGCCGCTCTGGT
CTTCCTGATGGACCGCTTCCTCTACGGGCTGGACGTCTCCGGGAAGCTGCTGCAGGTGGCCAAA
GGTCTCCACAAGCTGCAACCAGGGACGCCGATCGCCCCGCAGGTGGTTATCCGTCAAGCCCGGA
TCTCGGTCAACTCAGGGAAACTTTTAAAAGCAGAGTATATCCTGAGCAGTCTAATAAGCAACAA
TGGAGCAACAGGTACCTGGATATACAGAAATGAAAGTGATAAGATCCTGGTACAGTCAGTCTGT
ATACAGATCAGAGGACAAATTCTGCAAAAACTAGGCATGTGGTATGAAGCAGCAGAGCTAATAT
GGGCCTCCATCGTAGGATATGTGACCCTTCCTCAGCCAGATAAGAAGGGCATTTCCACATCACT
TGGAATCCTGGCAGACATCTTTGTTTCCATGAGCAGAAAAGATTATGAAAAGTTTAAAAACAAT
CCACAGATTAACTTGGGCTTGCTCAAGGAGTTTGACCACCATTTGTTGTCGGCTGCGGAAGCCT
GCAAACTGGCAGCTGCCTTCAGTGCCTACACACCCCTGTTCGTGCTCACAGCTGTGAATATCCG
TGGCACATGCTTATTATCATACACTAGTTCTAATGACTGTCCTCCAAGAATGAAAAACTTGTAT
CTGTGTGAAGCCAAAGAGGCCTTTGAGATCGGCCTTCTCACCAAGAGAGATGATCAGGTAGTTA
CCGGAAAACAGGAACTTCATAGCTTCATCAAAGCCGCCTTCGGTCTCACCACAGTGCACCGGAG
ACTCCACGGAGAGACGCACGCAGTCTGTGCCGCGAGTCAGCTCTGTAACGAAGCCATGAAGAAG
CTGTACGCTTTCAGTACTTCCTCCAGAAGTCAGGACAGAGAATCTCTGTCTCGAGAGGTCATGT
CTGTTATCAGCCAGGTGAAGGATCATTTACAGGTCCAAAGCTTCTCAAATTTAGATGACAGATC
TTATGTCCCAGAGAGTTTCAAGTACGGATTGAGTAAACCTCTCTTGCATGGACAAGTGGATTTC
CATAAAATCCTTGAAACCTATTCACAGCACCATACCTCCGTGTGTGAGGTTTTTGAAAACATTT
GTGGGAGCAACAAAAATAAACTAAAAGACATAAAAACAGGAGTCTGTATCACTGCTTTAAAAAC
AGAAACAAAAACAACCACAGATACCATGACTGCGACTCAAGACAAACCATGCTCACAAAAAGGC
ACGGGTCCAGAGATACCCAGAAGGGTAGGAAGGAGAAACTGGACCCATTCTGAGGCATTCCGCG
TCTCCCTGGATCCAGATGTGGAGACTGAGACTGAGCCGCCTGACCACAGCAATGTGGGGGAAGA
TGTCTGCCACAAGTCTCTGAGCAACAGCCAGAGCTCCAGTACTTGGAGCAAGTTATCAGGGCTT
AGTTCTTCTTCAAGCTGGGAGGAAGTGAATGATCCTATCGATGACAGATCAGCTAGAAAACAAT
CTAGCAAAGAAGAACATCTTGTGGACACTGCCCCATCTGAGGAGCTGGAGAATGGCAGGGATCA
CAGAGCTGTGCGATCATTGTCTTCAGAGCTTCACAAGGTTTCTCTCCAAATATCCCCAGATGAC
AGTTTAAAGCCTTCTCAGGGCCAACCACACAAACGCATGCCCTTCACAACCTTCTGTCCTCACA
ACACAACCCACACGGGCTTGGTCTCTGATGCAGGGCTATCAGAAGAAGCTCCAGAAGGTGTCCA
GGCAGTCCAACATGCAGGACCTGGCCATACTTCTGCTCACTTCCAACCCTCATGTAGTTCTGCT
TCTTGGTCTTCTGATTCTGGTAGGTTCAAGCACATGGCCACCTGTCCTTCAATCCAAGAAGAAG
AAGACTTTGAAATAATCCATGATTTTCCAGAAACCAACTATGATGTCGAAGACAGACATGGGGA
AGAAAAGGGAAAAGAACTCCATGAGAAATATGTGGGCCCTGTATTTAAAGAGAGCTTCTTCTGG
GTGGACCCAGAAGGAGAAACAGAGGAAAGCACAAAAGATGTGCCTTTAGACTCTGGTGTAGTCG
TGGGCAGTTCTCAGGGCCACAGTTCCATGTTGGCATGTAGCTCTTTCACTTATCAGTCTGTTCA
ACATCCTGACTCAGAAAAGGTGGGTGGTGGCTCAGTCAGGAAGCAGGGCATTGACCCTGATGCC
CCAACAGAGGATGAGGAGGGCCACCTCTTTGACAGTACAGATGTCTGCTCCTCAGGTGGACATG
ACTGTCCTAGACCATGCACCATGGGACAGCCACCTGGTCAGAGGACTGAGACCCCCAGTTCCTC
TGTTAACAGTAACATTCCCTTTCCTGTGCTCAGCGAGGATGGTGCCACCACAGAAGAAGGAAAT
GAACCCGGACACATGCTAAACTGCAGCCAGAGCTCCAGCTCATCCCTTTCATGGTGGATGAAGT
CACCTACATATTCCAGTGGTTCTTCTGAGGGGGAAAGCTTATGGTCTTCTCTGAATTCCAGTGG
AAGTTCTTCTTCTGTCTCATCGCTAGGAAAAATGAGGAAAGAAGTCCTTGAGGCTCGAACCCTG
CAGCCCGATGACCTGGACAAACTCTTGGCAGGAGTGAGGCATGATTGGCTGTTTCAGAGACTGG
AAAATACAGGCGTTTTTAAGCCCAGTCAACTCCAACGAGCTCACAATGCTCTTTTGTTAAAATA
TTCCAAGAAGTCTGAACTGTGGACAGCCCAGGAAACTGCTGTGTATTTGGGAGATTACCTAAAT
GTGAAGAAGAAAGGCAAGCAAAGAAATGCCTTTTGGGTTCATTATCTCCATCAGGAAGAAACGC
TGGGAAGATATGTTGGGAAAGAATATAAAGAGCAGAAGGGGCTCTGGCACCACTTCATTGATGT
GGAGCGGCAGATGACTGCACAGTACTACGTGACAGAGTTTAACAAGAGACTCTATGAACAAAAA
ATCCCAACGCAGATATTCTACATCCCCTCCACAATATTACTGATTTTAGAAGGCAAGACAATAA
AGGGATGTATCAGTGTGGAGCCTTATATCCTGGGAGAATTTGTAAAATTATCAAATAATGCCAA
AGTTGTGAAAACAGAATACAAAGCCACAGAATATGGCTTGGCTTATGGCCATTTTTCTTATGAG
TTTTCTAATCATAAAGATGTTGTGGTTGATTTACAAGGTTGGGTGACTGGTAATGGAAAAGGAC
TCATCTACCTCACAGATCCCCAAATTCACTCTGTTGATCAGAAAAATGTCACTACCAATTTTGG
AAAGAGAGGAATTTTTTACTTCTTTAATGACCAGCATGTGAAATGTAATGAAATATGCCACCGT
CTTTCTTTGACTAGACCTTCAATGGGGAAACTAAACAAGTCATAGACTGCGGATTGGCAAAGAG
ACAGACCTCTGTACTCACCAACATCAACTTCTCCTCTCCATCTGGGCAACAGAACATGGCACAG
CCCCTCTCCTTAAGGCTAGTTGTGGCCAATGGTTTGTGAGAGGAACTGATGAGTATCACTTTCA
GGCCTAGATTTAATTCTAGTACAATATCCTTCAGGGTTTCCTTTCTCTGTCACAGTTACCAAGA
ATGTGTCAGGAGGTAGCTACTTATGAGCACAGGTCCCACAGTGATGGCAACGTGGGAAAGAGCC
CTTCTGATCCACAAGGATACAAAACACTGCCGAGAAATAAATTTGGTGCTTGAACCAGTGAGAT
TTTGGAGCTTGCTGTCACTATCTGTTGAGACTGACACTATTGACTTTTTTCCTATTGAATTAGG
CATGTAATATA

hide sequence

RefSeq Acc Id:

XM_040292989 ⟹ XP_040148923

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405301	8,612,620 - 8,737,685 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_021585336	(Get FASTA)	NCBI Sequence Viewer
	XP_040148923	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000021405.2
GenBank Protein	KAG3275810	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_021585336 ⟸ XM_021729661

- UniProtKB:

I3NAK8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNNQKAVAAVLQECKQVLDQLLLEAPDVSEEDKSEDQRCRASLPSELRTLIQEAKEMKWPFVPE
KWQYKQAMSPEDKTNLQDVIGAGLQQLLASLRASIVAQDCAAAAALVFLMDRFLYGLDVSGKLL
QVAKGLHKLQPGTPIAPQVVIRQARISVNSGKLLKAEYILSSLISNNGATGTWIYRNESDKILV
QSVCIQIRGQILQKLGMWYEAAELIWASIVGYVTLPQPDKKGISTSLGILADIFVSMSRKDYEK
FKNNPQINLGLLKEFDHHLLSAAEACKLAAAFSAYTPLFVLTAVNIRGTCLLSYTSSNDCPPRM
KNLYLCEAKEAFEIGLLTKRDDQVVTGKQELHSFIKAAFGLTTVHRRLHGETHAVCAASQLCNE
AMKKLYAFSTSSRSQDRESLSREVMSVISQVKDHLQVQSFSNLDDRSYVPESFKYGLSKPLLHG
QVDFHKILETYSQHHTSVCEVFENICGSNKNKLKDIKTGVCITALKTETKTTTDTMTATQDKPC
SQKGTGPEIPRRVGRRNWTHSEAFRVSLDPDVETETEPPDHSNVGEDVCHKSLSNSQSSSTWSK
LSGLSSSSSWEEVNDPIDDRSARKQSSKEEHLVDTAPSEELENGRDHRAVRSLSSELHKVSLQI
SPDDSLKPSQGQPHKRMPFTTFCPHNTTHTGLVSDAGLSEEAPEGVQAVQHAGPGHTSAHFQPS
CSSASWSSDSGRFKHMATCPSIQEEEDFEIIHDFPETNYDVEDRHGEEKGKELHEKYVGPVFKE
SFFWVDPEGETEESTKDVPLDSGVVVGSSQGHSSMLACSSFTYQSVQHPDSEKVGGGSVRKQGI
DPDAPTEDEEGHLFDSTDVCSSGGHDCPRPCTMGQPPGQRTETPSSSVNSNIPFPVLSEDGATT
EEGNEPGHMLNCSQSSSSSLSWWMKSPTYSSGSSEGESLWSSLNSSGSSSSVSSLGKMRKEVLE
ARTLQPDDLDKLLAGVRHDWLFQRLENTGVFKPSQLQRAHNALLLKYSKKSELWTAQETAVYLG
DYLNVKKKGKQRNAFWVHYLHQEETLGRYVGKEYKEQKGLWHHFIDVERQMTAQYYVTEFNKRL
YEQKIPTQIFYIPSTILLILEGKTIKGCISVEPYILGEFVKLSNNAKVVKTEYKATEYGLAYGH
FSYEFSNHKDVVVDLQGWVTGNGKGLIYLTDPQIHSVDQKNVTTNFGKRGIFYFFNDQHVKCNE
ICHRLSLTRPSMGKLNKS

hide sequence

RefSeq Acc Id:	XP_040148923 ⟸ XM_040292989
- UniProtKB:	I3NAK8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000021405 ⟸ ENSSTOT00000027399

Protein Domains

Alpha-type protein kinase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000023490	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000027399.2	UniProtKB/TrEMBL
Gene3D-CATH	MHCK/EF2 kinase	UniProtKB/TrEMBL
	Phosphorylase Kinase, domain 1	UniProtKB/TrEMBL
InterPro	ALPK1	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	MHCK_EF2_kinase	UniProtKB/TrEMBL
NCBI Gene	Alpk1	ENTREZGENE
PANTHER	ALPHA-PROTEIN KINASE 1	UniProtKB/TrEMBL
	PTHR46747	UniProtKB/TrEMBL
Pfam	Alpha_kinase	UniProtKB/TrEMBL
PROSITE	ALPHA_KINASE	UniProtKB/TrEMBL
SMART	Alpha_kinase	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/TrEMBL
UniProt	I3NAK8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM