Ulk3 (unc-51 like kinase 3) - Rat Genome Database

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Gene: Ulk3 (unc-51 like kinase 3) Ictidomys tridecemlineatus
Analyze
Symbol: Ulk3
Name: unc-51 like kinase 3
RGD ID: 12654359
Description: ENCODES a protein that exhibits ATP binding (inferred); protein serine/threonine kinase activity (inferred); INVOLVED IN protein autophosphorylation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bloom syndrome (ortholog); Brugada syndrome 8 (ortholog); FOUND IN autophagosome (inferred); cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein kinase ULK3; unc-51 like kinase 3, transcript variant X1; unc-51 like kinase 3, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640115,959,762 - 115,965,747 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647133,807,010 - 33,814,573 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647133,807,825 - 33,814,520 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ulk3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640115,959,762 - 115,965,747 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647133,807,010 - 33,814,573 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647133,807,825 - 33,814,520 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ULK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381574,836,118 - 74,843,156 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1574,836,118 - 74,843,346 (-)EnsemblGRCh38hg38GRCh38
GRCh371575,128,459 - 75,135,497 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361572,915,512 - 72,922,605 (-)NCBINCBI36Build 36hg18NCBI36
Build 341572,915,512 - 72,922,523NCBI
Celera1552,078,488 - 52,085,567 (-)NCBICelera
Cytogenetic Map15q24.1NCBI
HuRef1551,925,493 - 51,932,536 (-)NCBIHuRef
CHM1_11575,247,144 - 75,254,187 (-)NCBICHM1_1
T2T-CHM13v2.01572,706,014 - 72,713,002 (-)NCBIT2T-CHM13v2.0
Ulk3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39957,496,423 - 57,503,516 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl957,496,735 - 57,503,516 (+)EnsemblGRCm39 Ensembl
GRCm38957,589,141 - 57,596,233 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl957,589,452 - 57,596,233 (+)EnsemblGRCm38mm10GRCm38
MGSCv37957,437,259 - 57,444,040 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36957,387,595 - 57,394,744 (+)NCBIMGSCv36mm8
Celera954,825,256 - 54,832,041 (+)NCBICelera
Cytogenetic Map9BNCBI
cM Map931.09NCBI
Ulk3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8866,888,820 - 66,895,380 (+)NCBIGRCr8
mRatBN7.2857,992,396 - 58,000,220 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl857,992,723 - 57,999,467 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx863,525,837 - 63,531,343 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0861,803,414 - 61,808,920 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0859,667,961 - 59,673,467 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0862,368,548 - 62,375,229 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl862,368,998 - 62,374,504 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0862,146,130 - 62,152,150 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4861,343,722 - 61,348,824 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera857,458,952 - 57,464,458 (+)NCBICelera
Cytogenetic Map8q24NCBI
Ulk3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554503,095,607 - 3,101,832 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554503,095,604 - 3,101,774 (+)NCBIChiLan1.0ChiLan1.0
ULK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21664,063,876 - 64,070,979 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11568,227,546 - 68,234,625 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01553,778,676 - 53,785,754 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11573,396,341 - 73,403,362 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1573,396,341 - 73,403,362 (-)Ensemblpanpan1.1panPan2
ULK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13037,897,641 - 37,903,625 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3037,897,804 - 37,903,700 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3037,829,684 - 37,836,069 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03038,102,097 - 38,108,482 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3038,102,101 - 38,108,470 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13038,054,849 - 38,061,229 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03038,101,205 - 38,107,590 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03038,336,704 - 38,343,091 (-)NCBIUU_Cfam_GSD_1.0
ULK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl758,699,984 - 58,707,187 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1758,699,989 - 58,707,191 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2763,388,626 - 63,395,785 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ULK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1268,628,289 - 8,635,465 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl268,628,454 - 8,636,092 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048132,995,967 - 133,003,001 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ulk3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462489454,683 - 59,716 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462489453,677 - 59,807 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000020607   ⟹   ENSSTOP00000021319
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647133,807,010 - 33,814,573 (-)Ensembl
RefSeq Acc Id: XM_021728414   ⟹   XP_021584089
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640115,959,762 - 115,965,747 (-)NCBI
SpeTri2.0NW_00493647133,807,825 - 33,813,820 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005728866
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640115,960,892 - 115,965,745 (-)NCBI
RefSeq Acc Id: XR_005728867
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640115,959,762 - 115,965,745 (-)NCBI
Protein Sequences
Protein RefSeqs XP_021584089 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000021319.1
GenBank Protein KAG3262294 (Get FASTA)   NCBI Sequence Viewer  
  KAG3262295 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021584089   ⟸   XM_021728414
- UniProtKB: I3NAC2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000021319   ⟸   ENSSTOT00000020607
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000028194 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000020607.2 UniProtKB/TrEMBL
Gene3D-CATH Phosphorylase Kinase, domain 1 UniProtKB/TrEMBL
  Phosphotransferase system, lactose/cellobiose-type IIA subunit UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Atg1-like UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  MIT_dom UniProtKB/TrEMBL
  MIT_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene Ulk3 ENTREZGENE
PANTHER PTHR24348 UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE ULK3 UniProtKB/TrEMBL
Pfam MIT UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART MIT UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF116846 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt I3NAC2 ENTREZGENE, UniProtKB/TrEMBL