Advanced Search (OLGA)

Gene: Eda (ectodysplasin A) Ictidomys tridecemlineatus

Analyze

Symbol:

Eda

Name:

ectodysplasin A

RGD ID:

12621844

Description:

ENCODES a protein that exhibits cytokine activity (inferred); death receptor agonist activity (inferred); death receptor binding (inferred); INVOLVED IN animal organ development (inferred); canonical Wnt signaling pathway (inferred); cell differentiation (inferred); ASSOCIATED WITH anodontia (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); FOUND IN apical part of cell (inferred); collagen trimer (inferred); endoplasmic reticulum membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ectodysplasin-A; LOC101956136

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EDA (ectodysplasin A)	NCBI	Ortholog
Mus musculus (house mouse):	Eda (ectodysplasin-A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Eda (ectodysplasin-A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Eda (ectodysplasin A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EDA (ectodysplasin A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EDA (ectodysplasin A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EDA (ectodysplasin A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EDA (ectodysplasin A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Eda (ectodysplasin A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	47,673,194 - 47,996,323 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936777	1,238,272 - 1,557,410 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936777	1,545,293 - 1,561,109 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

anodontia (ISO)

autistic disorder (ISO)

autosomal hemophilia A (ISO)

Clouston syndrome (ISO)

craniofrontonasal syndrome (ISO)

ectodermal dysplasia (ISO)

ectodermal dysplasia 1 (ISO)

factor VIII deficiency (ISO)

genetic disease (ISO)

hypohidrotic ectodermal dysplasia (ISO)

melanoma (ISO)

otitis media (ISO)

Selective Tooth Agenesis 2 (ISO)

Selective Tooth Agenesis, X-Linked, 1 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

tooth agenesis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

Cellular Component

apical part of cell (IEA)

collagen trimer (IEA)

endoplasmic reticulum membrane (IEA)

extracellular region (IEA)

extracellular space (IEA)

lipid droplet (IEA)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

cytokine activity (IEA)

death receptor agonist activity (IEA)

death receptor binding (IEA)

protein binding (ISO)

receptor ligand activity (IEA)

signaling receptor binding (IEA)

tumor necrosis factor receptor binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Eda
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	47,673,194 - 47,996,323 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936777	1,238,272 - 1,557,410 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936777	1,545,293 - 1,561,109 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EDA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	69,616,113 - 70,039,472 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	69,616,067 - 70,039,472 (+)	Ensembl			hg38	GRCh38
GRCh37	X	68,835,957 - 69,259,322 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	68,752,636 - 69,176,047 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	68,618,931 - 69,042,340	NCBI
Celera	X	69,189,229 - 69,612,705 (+)	NCBI		Celera
Cytogenetic Map	X	q13.1	NCBI
HuRef	X	62,655,756 - 63,080,124 (+)	NCBI		HuRef
CHM1_1	X	68,729,282 - 69,152,930 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	68,049,526 - 68,472,825 (+)	NCBI		T2T-CHM13v2.0

Eda
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	99,019,212 - 99,444,366 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	99,019,212 - 99,444,368 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	99,975,606 - 100,400,760 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	99,975,606 - 100,400,762 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	97,170,945 - 97,596,099 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	82,816,290 - 83,239,228 (+)	NCBI		MGSCv36	mm8
MGSCv36	X	96,178,325 - 96,603,479 (+)	NCBI		MGSCv36	mm8
Celera	X	86,912,424 - 87,326,326 (+)	NCBI		Celera
Cytogenetic Map	X	C3	NCBI
cM Map	X	43.59	NCBI

Eda
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	69,118,577 - 69,520,274 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	69,118,796 - 69,520,274 (+)	Ensembl				GRCr8
mRatBN7.2	X	65,078,454 - 65,480,172 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	65,078,673 - 65,480,172 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	66,562,137 - 66,963,601 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	70,062,528 - 70,463,991 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	67,623,411 - 68,024,880 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	69,730,123 - 70,222,693 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	69,730,242 - 70,220,329 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	70,602,479 - 71,095,806 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	87,982,303 - 88,390,680 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	65,441,737 - 65,840,991 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

Eda
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955475	9,178,234 - 9,588,440 (+)	Ensembl
ChiLan1.0	NW_004955475	9,177,911 - 9,592,150 (+)	NCBI	ChiLan1.0	ChiLan1.0

EDA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	69,290,367 - 69,717,310 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	69,293,970 - 69,720,913 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	58,881,660 - 59,308,451 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	68,946,036 - 69,371,175 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2

EDA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	54,078,694 - 54,515,535 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	54,078,966 - 54,515,535 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	44,906,268 - 45,341,896 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	55,046,702 - 55,482,183 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	55,046,981 - 55,482,183 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	53,014,333 - 53,451,228 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	54,343,122 - 54,782,021 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	54,267,090 - 54,709,181 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

EDA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	55,771,041 - 56,103,265 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	55,770,958 - 56,103,296 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	62,968,935 - 63,300,549 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EDA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	59,453,157 - 59,861,555 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666065	1,311,650 - 1,730,565 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Eda
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624891	58,991 - 488,788 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624891	55,310 - 489,072 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021720043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000001331 ⟹ ENSSTOP00000001192

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936777	1,238,272 - 1,557,410 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000030717 ⟹ ENSSTOP00000032426

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936777	1,238,272 - 1,556,038 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000039907 ⟹ ENSSTOP00000030654

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936777	1,238,272 - 1,557,410 (+)	Ensembl

RefSeq Acc Id:

XM_021720043 ⟹ XP_021575718

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,673,194 - 47,996,309 (-)	NCBI
SpeTri2.0	NW_004936777	1,545,293 - 1,561,109 (+)	NCBI

Sequence:

show sequence

GTTAAAAACAAGAAAAAGGGAAAGAAGGCAGGGCCGCCTGGGCCCAATGGTCCCCCAGGACCTC
CAGGACCACCAGGACCTCAGGGACCCCCAGGGATTCCAGGAATTCCTGGAATTCCAGGAACAAC
TGTCATGGGACCACCTGGTCCTCCAGGTCCTCCCGGTCCTCAAGGTCCCCCTGGCCTCCAGGGA
CCTTCTGGTGCTGCTGATAAAGCTGGAAGTCGAGAAAACCAGCCAGCTGTGGTGCATCTACAGG
GCCAAGGGTCAGCAATTCAAGTCAAGAATGATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCG
CATCACTATGAACCCCAAGGTGTTTAAGCTACATCCCCGCAGCGGGGAGCTGGAGGTACTGGTG
GACGGCACCTACTTCATCTATAGTCAGGTTTACTACATCAACTTCACTGACTTTGCCAGCTATG
AGGTGGTGGTGGATGAGAAGCCCTTCCTGCAGTGCACCCGCAGCATCGAAACAGGCAAGACCAA
CTACAACACCTGCTATACTGCAGGTGTTTGCCTCCTCAAGGCCCGGCAGAAGATCGCCGTGAAA
ATGGTGCACGCTGACATCTCTATCAATATGAGCAAGCACACCACCTTCTTTGGGGCCATCAGGC
TGGGCGAAGCCCCTGCATCCTAGACTCCCCCCATTTTGCCCCTGCCCATGTCCCTGCCCCAGGT
TTGGGAGCCGGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAGGTATATTGGCGTTGCAG
CCACAGAGAGAAACGCCCCTGTGCTATTTATTCCCCAGTGACTCCAGGATGATAAGGCCTGCTT
GATTTTCCAGAATGACTTTGATTTAACAGGACAGTTGATGGAGCCCCAGGGTTTACAGGAAGCA
GAAACCTTCTTTGGCTCCTTATTGACTGGCTTATGGCATGACTCTTCAACCCCGAGGTCCCTGT
TGTCAGATTTATCATTGTTGCACTAAAATGAGGATCCAGGGCAGTGGACCAGAGAAAGTGAAGG
TGCACTCCAGACTCTGGGGGTGACCCCAAGGGTGCTTCTGCTCCTCTCTTGGCTGGGGGTGGGG
CAAGGGTGGCATTAGGCTACAGCCTAAGGAAAGAGCCAGGAAGGAAAAGATAGATGCCGGTGGC
AGAGACCAGGGAAAAAACCTGCCAAGCAAGTGTCCTTGGCAGTGGAAGCATTCTTGCTGCTCTG
CACTGTGACCTGCAAGAGGGTCAAGGAGCCCTTCCCACTCAGGCTGAGAGCCACACTGTGGCAG
CTTTCTGGGCTCCAGAGACGGGAACTTTGCTCTGCCAGGGAACCACTGCAGGAACAGCCACAAA
CCTGCCTGCATAAGACTCTGAATCCGTACTTGGGGCCACATGTCTCTTTGTTTACAGCTATGCT
GCATGCTCAGAAAACTCCCTAGGGTTCCCCTCGCAATTGCACCTGCCCCAATCTGACTAGAACT
CCTGTCTTCTTTCTCCACAGAGCCTACCTCTGTCTGAGACAGGTGCCTAACCTGGGACCTGTGC
TTATGTGAGTCTGGGATATTCTTTAGCTTACCTGGGCACAAAGAGAAGTTTCCATTTACTAAAC
AATACAAGTAGTATTCATCTAATTCTAATCAAACTGTGTCTGGGGGCAAGGGGTTGGACTGGAT
GACCTCCAGACATCCCTAAGTCAAGTTCTAATATTTGTGACTCTTAACAGGCAGCTGCCACAGT
AGCCTTCTGAATTCCCAAACCCTAGACTGCCCTTGGGCATCAGCAAAGCAGAGTTTTACTACCT
GGCCTAGAAAGGGCAAGAGGTAGGGATAAGACAGGGGAGTTTTGTCCAAGTTGCCACAACCCAA
GTGATCATTAGGACAGGCTTCATCCGAAAGCACAGCAGCCAATGGCCTATTAGAGCTTAGTCAC
CCCAGAGCCCCTGCTGCTTCACTGAAGTCAGGCTCAGGAGAAGCCAGCATCTGGGCATTGGGCG
GGGTTCTGTACCCTAGCTCAGGTCCAAAGGCTCCTTGGCCCAACCCCAAGCTTCCTGCCAGGTC
AAATGCTAGGACCATTCAAGGGCCTTATTTCTACCTGCCTAGATACAACCTGGCTTCCAAGTGC
TAGGTCCAGGCCAACGCTGTGGGGTCAGCCTTGTACAGTTTGCTCCTCTTGTTCCTAAAATCTG
TTTTCTTCTGAGGAGATGGGAATACATTCCTTCAGGCAACTGGAATCTACCAAGAACAACAGGT
ATTTCTTTCTCAGATGTGCCTCCCCTTCAAGGGTCAGGGCAAGAAGTGGTGGACCAGGCCTCTA
TTGTCCAGTTGCTAATGACAGCCTTGCAACCGGAGGCGGAGGTAAGGCAAGCTACAGGCTCAAC
TCCTTTAAAGTGCCTTACACAATCTGCCATTGTACTAGGAACTGACAGAACCTCTCAAAGTTTG
GAAAGTACTTTCTCTTTTATTGTTTCCTTTGAAGAAGACAGAGCAGAGAATATCTCAAATGCCA
TTGTTTAGATGAGGCTCAGAGAGGTGAAGTGCTTTGACTAAGATTTCACCCAGTTTAAGTCAGC
TAGGTCTGACTCCAAAATTATTCCCTTACACCATAGAACTGTGTGGAATTGGGGTCTATAGAGA
ACCAATAAAGGTGATGATATGGAACCAAGATCCTTGAGAGTCTTAGGGAGAGACCCAGAAATGC
CCATTTTCATTACTTGATAGTAATCCCAGTTCTCTTGACTATTAGGGGCTCTTGTAGCAAAGAG
TCAAACATCTCTTTGGGAAACAGCCATCAGCCATAGAGGCTGCTGAGAAGAATATCAGCAGCCT
CTGGGACCCCATAATGGGTAGCTCCTGATGTTCTTTTCACCCATCTGACAAAACAAGCAGCCAT
CACAAATGGAGTCCTACTGTGGGCAAAGTCCTCCTTACAGACAGCCAGCCACCAGGAGCCCACT
GACTCTTCACAGCTACTAAGTGACTCCTTATCTCTTTCTACCAGAACACAGAGACCTTGATAAC
ATCAGCATCTCTCAGGGAAGATTAGAGAGAAGGCTGATTCTAAAGCCAAGTGGGTATGAGGAGA
AAGGAGGAAAAAACTTCTGAATTGTACCCCTAAAGGACAGTCTGACACCCATCCCATTCTCCAG
ATATGGAAGGGATTGTAGGAAAAGCAGGATTCCCACTGGACCCCACATTCTTTCTGAACCCTCC
CTAGAGGGGGAGTGATGGTAAAGGAAATAAGAAATAGCTGGGGAACCCTGCTGTGGTCTAGTCA
TTGGTGAAGTAGTGAAGCAGTTTACTGTTGGAGGATGTGGAGATAGATTTACAGTTTGGAATTA
TGATGATGGGAATTTACCAGAAGGCTAAGGCTAGTGTGGAGAATGGGACAAGGACATTGGAGGG
GAAGCAGATGACAGGTTTGCAAGAGAATTGCATGTCAGGAGCTTCTGCCAGCTGCTTGGCTTCA
ACAGCCAAGCTGGTACAAAAGGCAGCTGTGGGAGGCTGCTCAGCTACTGGTTCCCTGTAAAATG
TAGCATTTGCCTTATTTCCCCCACTTCATCCATCCTGAGCCATATTTCTTTTGCTTAACAGGAA
AGGGCTAGGAACCCTGTATGCACTCACATGTGAGTGTGTATGTCTTCTGTAACTAGAAGATTCA
GAGAAATTTAAAACTAAAAAGGCCTTTAGAGGGAATATAGTCTAACCTACATTCCACCCTCTTA
CTCATGTGGAAACCGAGGCCCAGAGAGGGAAGATGATCTGCCCAATGATGAGCAAGCTCTGACC
TCCAGATTCAGCAGAGAAAAGGAAGGAGAAGAGCCACCCCTGTTGTACAGGGCCACCTTCTTTC
TTCCACCCACCTACTCAAGGCTGGACGTGCTTGGCCCCCTTCAGGAGCCTGGCCAGGCAGGGAG
AGGAGAGAGGCAGCCTTCATCAGAACTCTGCTCTGCCCCCCCACACACACATTTGCCCAGCTCC
TGCCTGTGTACTAAAAGGTTCCAGATTGGCCCAGTACCAGGAAGTTCTTAGGCCACCCTAGTGC
TGCCTCAGGTCCCATCCTTGCCTCAGGGCTCCCATAGGCCTTGCCAGTACAGAGAAGGAACCCA
ATTTTTTTTCTCTTTTAATCCATTTCAGGGCTCTCCAGGAGGCATTGGGGTGTGTTATTTCTTT
ATTCAGAGAGCTCCAGCTGGGATAGGAGAGAGTAGGCTTTGTTGTGAGAATGGCCTGGAGCAGG
CCCATTGCTGCTTTTGGGGGGTCAGCATCCAGTGTGAGATACTGTGTATATAAACTATATATAA
TGTATATAAACTGGGATGTAAGTTTGTGTAAATTAATGGTTTATTCTTTGCAAATAAAGCGCTT
TCCCCCTCCT

hide sequence

RefSeq Acc Id:

XM_040282087 ⟹ XP_040138021

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,673,194 - 47,996,317 (-)	NCBI

RefSeq Acc Id:

XM_040282098 ⟹ XP_040138032

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,673,194 - 47,996,321 (-)	NCBI

RefSeq Acc Id:

XM_040282100 ⟹ XP_040138034

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,673,194 - 47,996,317 (-)	NCBI

RefSeq Acc Id:

XM_040282101 ⟹ XP_040138035

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	47,677,153 - 47,996,323 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_021575718	(Get FASTA)	NCBI Sequence Viewer
	XP_040138021	(Get FASTA)	NCBI Sequence Viewer
	XP_040138032	(Get FASTA)	NCBI Sequence Viewer
	XP_040138034	(Get FASTA)	NCBI Sequence Viewer
	XP_040138035	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000001192.2
	ENSSTOP00000030654.1
	ENSSTOP00000032426.1
GenBank Protein	KAG3272402	(Get FASTA)	NCBI Sequence Viewer
	KAG3272403	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_021575718 ⟸ XM_021720043
- Peptide Label:	isoform X2
- UniProtKB:	A0A287DAU8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPPGPPGPPGPQGPPGLQGPSGAADKAGSRENQPAVVHLQGQGSAIQVKNDLSGGVLNDWSRI TMNPKVFKLHPRSGELEVLVDGTYFIYSQVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTNY NTCYTAGVCLLKARQKIAVKMVHADISINMSKHTTFFGAIRLGEAPAS hide sequence

RefSeq Acc Id:	XP_040138032 ⟸ XM_040282098
- Peptide Label:	isoform X3
- UniProtKB:	A0A287DAU8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138034 ⟸ XM_040282100
- Peptide Label:	isoform X4
- UniProtKB:	A0A287DAU8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138021 ⟸ XM_040282087
- Peptide Label:	isoform X1
- UniProtKB:	I3LYD7 (UniProtKB/TrEMBL), A0A287DAU8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138035 ⟸ XM_040282101
- Peptide Label:	isoform X5
- UniProtKB:	A0A287DFT0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000030654 ⟸ ENSSTOT00000039907

Ensembl Acc Id:

ENSSTOP00000001192 ⟸ ENSSTOT00000001331

Ensembl Acc Id:

ENSSTOP00000032426 ⟸ ENSSTOT00000030717

Protein Domains

THD

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000001329	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000001331.2	UniProtKB/TrEMBL
	ENSSTOT00000030717.1	UniProtKB/TrEMBL
	ENSSTOT00000039907.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.40	UniProtKB/TrEMBL
InterPro	TNF_dom	UniProtKB/TrEMBL
	TNF_Ligand_Superfamily	UniProtKB/TrEMBL
	Tumour_necrosis_fac-like_dom	UniProtKB/TrEMBL
NCBI Gene	Eda	ENTREZGENE
PANTHER	ECTODYSPLASIN-A	UniProtKB/TrEMBL
	PROTEIN EIGER	UniProtKB/TrEMBL
Pfam	TNF	UniProtKB/TrEMBL
PROSITE	TNF_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49842	UniProtKB/TrEMBL
UniProt	A0A287DAU8	ENTREZGENE, UniProtKB/TrEMBL
	A0A287DFT0	ENTREZGENE, UniProtKB/TrEMBL
	I3LYD7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-26	Eda	ectodysplasin A	LOC101956136	ectodysplasin-A	Symbol and/or name change	5135510	APPROVED
2017-07-13	LOC101956136	ectodysplasin-A	Eda	ectodysplasin A	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIA

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIA

Imported Disease Annotations - OMIM