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Gene: Recql4 (RecQ like helicase 4) Ictidomys tridecemlineatus

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Symbol:

Recql4

Name:

RecQ like helicase 4

RGD ID:

12590173

Description:

ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); bubble DNA binding (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of sister chromatid cohesion (ortholog); pigmentation (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); Baller-Gerold syndrome (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ATP-dependent DNA helicase Q4; RecQ protein-like 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RECQL4 (RecQ like helicase 4)	NCBI	Ortholog
Mus musculus (house mouse):	Recql4 (RecQ protein-like 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Recql4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Recql4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RECQL4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RECQL4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RECQL4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RECQL4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Recql4 (RecQ like helicase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936470	7,755,253 - 7,761,705 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ISO)

Baller-Gerold syndrome (ISO)

breast cancer (ISO)

DNA Repair-Deficiency Disorders (ISO)

epidermolysis bullosa simplex with muscular dystrophy (ISO)

genetic disease (ISO)

hepatoblastoma (ISO)

Hereditary Neoplastic Syndromes (ISO)

holoprosencephaly (ISO)

malignant fibrous histiocytoma (ISO)

multiple myeloma (ISO)

ovarian cancer (ISO)

peripheral osteosarcoma (ISO)

rapadilino syndrome (ISO)

Recombinant Chromosome 8 Syndrome (ISO)

Rothmund-Thomson syndrome (ISO)

Rothmund-Thomson Syndrome Type 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA replication (ISO)

negative regulation of sister chromatid cohesion (ISO)

pigmentation (ISO)

positive regulation of cell population proliferation (ISO)

sister chromatid cohesion (ISO)

skeletal system development (ISO)

skeletal system morphogenesis (ISO)

telomere maintenance (ISO)

telomeric D-loop disassembly (ISO)

Cellular Component

chromosome, telomeric region (ISO)

nucleoplasm (ISO)

Molecular Function

3'-5' DNA helicase activity (ISO)

bubble DNA binding (ISO)

DNA/DNA annealing activity (ISO)

oxidized purine DNA binding (ISO)

protein binding (ISO)

telomeric D-loop binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Recql4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936470	7,755,253 - 7,761,705 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RECQL4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	144,511,288 - 144,517,833 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	144,511,288 - 144,517,845 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	145,736,671 - 145,743,217 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	145,707,479 - 145,714,008 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	145,707,621 - 145,713,976	NCBI
Celera	8	141,912,140 - 141,918,890 (-)	NCBI		Celera
Cytogenetic Map	8	q24.3	NCBI
HuRef	8	140,849,825 - 140,856,695 (-)	NCBI		HuRef
CHM1_1	8	145,774,859 - 145,781,399 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	145,681,054 - 145,688,017 (-)	NCBI		T2T-CHM13v2.0

Recql4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	76,587,753 - 76,594,820 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	76,587,753 - 76,594,748 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	76,703,553 - 76,710,616 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	76,703,553 - 76,710,548 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	76,534,171 - 76,540,906 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	76,530,996 - 76,537,731 (-)	NCBI		MGSCv36	mm8
Celera	15	78,197,351 - 78,204,086 (-)	NCBI		Celera
Cytogenetic Map	15	D3	NCBI
cM Map	15	36.28	NCBI

Recql4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	110,304,092 - 110,311,426 (-)	NCBI		GRCr8
mRatBN7.2	7	108,423,453 - 108,430,790 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	108,423,455 - 108,430,619 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	110,165,377 - 110,172,538 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	112,388,951 - 112,396,112 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	112,349,701 - 112,356,865 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	117,765,892 - 117,773,128 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	117,763,783 - 117,773,134 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	117,753,871 - 117,761,090 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	114,752,863 - 114,760,027 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	114,787,094 - 114,794,223 (-)	NCBI
Celera	7	104,773,347 - 104,780,504 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Recql4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	3,136,216 - 3,142,422 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	3,136,097 - 3,142,525 (-)	NCBI	ChiLan1.0	ChiLan1.0

RECQL4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	162,002,577 - 162,011,841 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	137,531,815 - 137,541,127 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1 Ensembl	8	144,267,101 - 144,276,985 (-)	Ensembl	panpan1.1		panPan2

RECQL4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	37,930,906 - 37,936,653 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	37,930,621 - 37,936,753 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	37,891,440 - 37,897,555 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	38,404,421 - 38,410,540 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	38,404,634 - 38,410,081 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	38,096,373 - 38,102,486 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	38,204,789 - 38,210,471 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	38,681,262 - 38,687,377 (-)	NCBI		UU_Cfam_GSD_1.0

RECQL4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	287,214 - 293,913 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	287,206 - 293,629 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	378,111 - 384,633 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RECQL4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	138,725,494 - 138,732,286 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	138,725,633 - 138,732,096 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	1,122,625 - 1,129,469 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Recql4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	12,345,844 - 12,351,637 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	12,345,326 - 12,351,783 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021723154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293434	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040293436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005737623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_021723154 ⟹ XP_021578829

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI
SpeTri2.0	NW_004936470	7,755,253 - 7,761,705 (+)	NCBI

Sequence:

show sequence

ATGACGTCGACACAACCCATTGGTCGATCCTACAGAGCCCGGCGCATTGGTCATCCGTCCCAGC
GGCCCCGCCCCAGCCCTGCCGCGCAGCCCCATTGGCTGGTAGACCGACGTCGCTGTTGTGGCGG
GAAGATTCGCAGGACGCGGGACTGGATCCCTATGGAGCGGCTGCGGGACGTGCGGACGCGACTA
CAGGAGTGGGAGCGCGGGTTCAGGCGGCAGCACCGGCGGCGGCCCGGCCAGGAAGACGTGGAGG
CGGCGCCCGAGGACGTCCGCGCTCTCTACCGGGAGTACCGCGCCCTAAAGCAGTCGGTGGTCCA
TGCCGGCGGCGGGCTCCGCAGCTCCGAGCCGTCGCTCCCAGCGGAGGAGGTTCTGGAGGACAGC
TGCTGGGGACCCCACCTGAATCGGGCAGCAACCCAGAGTCCACAACCTACTCCACAGATGAGCC
CGCGGGGATCTGTGCAGGACTATGGAAAGAGGCTCAAGGCCAATCTCAAGGTCATACTACAGGC
TGAGCCAACACTGGGCCGCAGACTCCAGCCTCCACGAAGACCCTTGTCTAAGATGCCCACCACA
GGTCCACCCAGCCCAAGGACTGCCCCCACTTCTCCAGAAGAAGTCAGTGGTGGCACACTACCCC
AGCCATCTGAGCCCAAGCGAAGTCCAGGCCGGCTCCAGCAGCTTCGGGCATCTCTGAGACTGCG
GCTGGGCTCCCTAGACCCTGGCTGGCTTCAGCGGTGCCACAGTGGACCCTTAGATTTTCTGAAG
CCCCCCAGTGCCTGCAGTCCTGGCCTGGGTAGAAAGGAGTCACAACACCTGACGTCGGGAGAGT
TTCTTGTCTTTGGTCCCAATACTTGCTCTGAGGAATTCTCACAAGGTCCAGAGACTCCAGCCCC
ACAGGCAGCCCAAAATGATATGGGGAGCCCTCAGCCCAGCAACCCTCAAGGCAAGAAGCCAAAG
TGGAGTGAGACTGGAGGGAGCCCTGTGCAGTCCCAGCAGGACATCAGCCAAACAGGACCCTTGT
CTGAGGGGACAGGGGCTGTAGCACTTGAAGAAGACCTTCCAGGGCAACCTGTACAGGCCCAGCC
ATCTCAGCCCCGTAGCAGTTCCTCAAGTCCATCTAGGAGAAAGAAGCCTAAGGGGATGGCCCAT
ACGTTGTCCCGTAGACCAGCTATCCAGGACAGAAGTAACTATGTCCGGCTCAACATGAAGCACA
AACGTTATGTGTGGGGTGGGGCCCTTCGAGGTAGGCTCCTCCGCAGGCAGGCATGGAAACAGAA
GTGGCAGAAGAAAGGGGAGTGTTTTGGGGGGGGTGGGGCCAGACCCCCAGCCAAGGATTCTTGT
TTCCAGTCTGGGCCGTTTGGCCGCTGGGTTCCCCAGTGCTCCAAGCCAGGCCCCACTCTGACCC
TTCAGAAGGAGATTGGCAAGAACAGGGACAACATGCAGTCCTTTCCCACTTTGGAAGAAGCAGC
CTGGAGAACAGACACTGCTTGCTGCCACCTCCCCAGTGAGTCAGGGGAGGAGGGTGGTTATACC
CAGTGGCCTCTGTGCCAGGCTGTTTCAGTGCAGCCTGGAGCCCCCAAAATACCTTCTCTCGTCT
GCCCAGTTGGTGAGAACACAGGACTTGCTGGGCCTGAGCTACAGGTGTGTTCCCCATCCCAGCA
CCCCCCAGTGCTACCACTCTACCCACCAGGGCCCTCGGGACAGGTAGCAGAGACACCAGCTGAG
GTGTTCCAGGCCCTGGAGCAACTAGGGTACCGAGCCTTCCGCCCAGGGCAGGAGCATGCAGTCA
TGCGGATCCTGTCCGGCATCTCCACACTGCTGGAGCTACCTACAGGTGCTGGTAAGTCCCTGTG
CTACCAGCTTCCTGCCCTGCTGTGCGCCCGCCGCAGCTCCTGCCTCACACTGGTGGTCTCCCCA
CTCCTGTCGCTCATGGATGACCAGATGTCCAGCCTGCCCCCATGTCTCAAGGCAGCCTGCCTCC
ACTCAGGCATGACCAAGAAGCAGCAGGAGTCTGTTCTGCAGAAGGTGCAGGCAGCCCAGGTGAA
TGTGCTGATGCTGTCCCCAGAGGCACTGGTTGGGGCTGGGACTGGCGGCCCTGCCAGCTTCCTC
CAGGCCTCCCAGCTGCCCCCCATGGCCTTTGCTTGCATTGATGAGGCCCACTGCCTCTCTCAGT
GGTCACACAATTTCCGGCCTTGCTACCTGCGCATCTGCAAAGTACTTCGGGAACACATGGGTGT
ACGCTGTTTCCTGGGTCTCACAGCCACAGCCACACGCAGCACTGCTCGTGATGTAGCCCAGCAC
CTGGGTGTAGCCGAGGAGCTTGGCAGGGGTGGGCCAGCCCCCATCCCTGCCAACTTGCACCTGT
CTGTGTCTGTAGACAGGAACCCACACCAGGCTCTGGTGACGCTGCTGCAGGGTGACCGCTTTCG
TGCCCTGGATTCAATCATCATTTACTGCAACCGACGGGAGGACACAGAGCGAGTTGCTGCCCTT
CTCCGAACCTGCCTGTATGCAGGGCAGGACCCAGGCTCTAGAGGTCATGCCCCAGAGACTGTAG
CTGCAGCTTATCATGCTGGCATGTGCACCCGGGAGCGGCAGCGAGTGCAGCGGGCCTTCATGCA
AGGCCATCTGCGGGTGGTGGTGGCCACCGTGGCCTTTGGCATGGGACTAGACAGGACAGATGTG
CGGGCCGTGCTGCACCTGGGGATGCCCCCAAGCTTTGAGAGCTACGTGCAGGCTGTGGGCCGTG
CTGGACGTGATGGGCAGCCTGCCCATTGCCACCTCTTCCTACAGCCCCAGGGCAAGGACCTGCA
GGAGCTGCGTAGGCACGTGCACGCCAACGGTGCCGATTTCTTGGCCCTGAAAAAGCTGGTACAG
CGCCTGTTTCCACCCTGCTCCTGTACCCCACAGCCTCCAGAGCAGGAAGGAGGCAGGAATGGGA
TGAGGCCCACAGCTGGGGCACCCCCGCAGGAGGCCAAGCAGCACAGTGGCCACTCAGCAGCCCC
AGTGCGGGGACATGTCTGCCCTGGGCATGCACGAGCACTCCCAATACAGCAAACAGTGCAGGCC
CTGGACATGCCAGAAGAGGCCATCGAGACCCTGCTGTGCTACCTGGAGCTGCATCCCCGGCACT
GGCTGGAGCTGCTGCCAACCACCTATTCCCGTTGTCACCTGCGCTGCCCTGGGGGCCCCACCCA
GCTCCAGGCACTGGCCCACAAGTGTCCTCTTGCAGCTGCATGCTGGGCCAGGTGGCCACCTGAG
GACATGGGGCCAGGCAGCTCCATGGAATTTGATGTGGTAGAGCTGGTGAACTCGATGGGCTGGG
AGCTGGCATCGGTGCAGCAGGCTCTCCGTCAGCTGCAGTGGGACCCAGAGCCCAGGACAGGTGT
GCTGCGGGGAACAGGGGTGATTGTGGAGTTCAGGGAGCTGGCGTTCCACCTGCGCAGCCCTGGT
GATCTGACTGCTGAGGAGCGGGACGAGGTGTGCGACTTTCTATTCAACCGTGTGCAGGCCCAAG
AGCGCAAGGCCCTGGCACATCTGCGCCGAATGTCTGAGGCCTTTCACAGTGTGGCCTTCCCCAG
CTGTGGGCCCTGCCTCGAGCAGCCTGACATGGATCGCAGTGCCCAGCTGAAGGCCCTACTCAGC
TGCTACTTCGAGGAAGAGGAAGAGGAAAGGGAAGAGGGAGGGATAGAGGAGCAGGGCCCAGAGC
CTGGGCAGGTCCAGCTTCAGGACTGGGAGGACCAGGTCCGCCATGACATCCGCCAGCTCCTGTC
CCTGAGGCCAGAAGAGAGGTTTTCCAGCAGGGCCGTGGCTCGTATCTTTCATGGCATTGGAAGC
CCTCGATACCCAGCCCAGGTATATGGGCAGGACCAGCGCTTCTGGAGAAAGTACCTACATCTGA
GTTTCCATGCCCTGATGCGACTGGCCACAGAGGAGCTCCTACTGGTTGGCCGATGACTGCCCTG
CTCACAAGGCTGCTGCCCCCATGTAGGACAGGTAGACACGTGGCCACTCCTCAAGGCAGCAG

hide sequence

RefSeq Acc Id:

XM_040293430 ⟹ XP_040149364

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

RefSeq Acc Id:

XM_040293431 ⟹ XP_040149365

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

RefSeq Acc Id:

XM_040293432 ⟹ XP_040149366

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

RefSeq Acc Id:

XM_040293433 ⟹ XP_040149367

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

RefSeq Acc Id:

XM_040293434 ⟹ XP_040149368

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

RefSeq Acc Id:

XM_040293436 ⟹ XP_040149370

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

RefSeq Acc Id:

XR_005737623

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405303	329,124 - 335,703 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_021578829	(Get FASTA)	NCBI Sequence Viewer
	XP_040149364	(Get FASTA)	NCBI Sequence Viewer
	XP_040149365	(Get FASTA)	NCBI Sequence Viewer
	XP_040149366	(Get FASTA)	NCBI Sequence Viewer
	XP_040149367	(Get FASTA)	NCBI Sequence Viewer
	XP_040149368	(Get FASTA)	NCBI Sequence Viewer
	XP_040149370	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	KAG3273336	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_021578829 ⟸ XM_021723154

- Peptide Label:

isoform X5

- Sequence:

show sequence

MTSTQPIGRSYRARRIGHPSQRPRPSPAAQPHWLVDRRRCCGGKIRRTRDWIPMERLRDVRTRL
QEWERGFRRQHRRRPGQEDVEAAPEDVRALYREYRALKQSVVHAGGGLRSSEPSLPAEEVLEDS
CWGPHLNRAATQSPQPTPQMSPRGSVQDYGKRLKANLKVILQAEPTLGRRLQPPRRPLSKMPTT
GPPSPRTAPTSPEEVSGGTLPQPSEPKRSPGRLQQLRASLRLRLGSLDPGWLQRCHSGPLDFLK
PPSACSPGLGRKESQHLTSGEFLVFGPNTCSEEFSQGPETPAPQAAQNDMGSPQPSNPQGKKPK
WSETGGSPVQSQQDISQTGPLSEGTGAVALEEDLPGQPVQAQPSQPRSSSSSPSRRKKPKGMAH
TLSRRPAIQDRSNYVRLNMKHKRYVWGGALRGRLLRRQAWKQKWQKKGECFGGGGARPPAKDSC
FQSGPFGRWVPQCSKPGPTLTLQKEIGKNRDNMQSFPTLEEAAWRTDTACCHLPSESGEEGGYT
QWPLCQAVSVQPGAPKIPSLVCPVGENTGLAGPELQVCSPSQHPPVLPLYPPGPSGQVAETPAE
VFQALEQLGYRAFRPGQEHAVMRILSGISTLLELPTGAGKSLCYQLPALLCARRSSCLTLVVSP
LLSLMDDQMSSLPPCLKAACLHSGMTKKQQESVLQKVQAAQVNVLMLSPEALVGAGTGGPASFL
QASQLPPMAFACIDEAHCLSQWSHNFRPCYLRICKVLREHMGVRCFLGLTATATRSTARDVAQH
LGVAEELGRGGPAPIPANLHLSVSVDRNPHQALVTLLQGDRFRALDSIIIYCNRREDTERVAAL
LRTCLYAGQDPGSRGHAPETVAAAYHAGMCTRERQRVQRAFMQGHLRVVVATVAFGMGLDRTDV
RAVLHLGMPPSFESYVQAVGRAGRDGQPAHCHLFLQPQGKDLQELRRHVHANGADFLALKKLVQ
RLFPPCSCTPQPPEQEGGRNGMRPTAGAPPQEAKQHSGHSAAPVRGHVCPGHARALPIQQTVQA
LDMPEEAIETLLCYLELHPRHWLELLPTTYSRCHLRCPGGPTQLQALAHKCPLAAACWARWPPE
DMGPGSSMEFDVVELVNSMGWELASVQQALRQLQWDPEPRTGVLRGTGVIVEFRELAFHLRSPG
DLTAEERDEVCDFLFNRVQAQERKALAHLRRMSEAFHSVAFPSCGPCLEQPDMDRSAQLKALLS
CYFEEEEEEREEGGIEEQGPEPGQVQLQDWEDQVRHDIRQLLSLRPEERFSSRAVARIFHGIGS
PRYPAQVYGQDQRFWRKYLHLSFHALMRLATEELLLVGR

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RefSeq Acc Id:	XP_040149364 ⟸ XM_040293430
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040149365 ⟸ XM_040293431
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040149366 ⟸ XM_040293432
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_040149370 ⟸ XM_040293436
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_040149367 ⟸ XM_040293433
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_040149368 ⟸ XM_040293434
- Peptide Label:	isoform X6

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	Recql4	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM