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Gene: Rhoa (ras homolog family member A) Ictidomys tridecemlineatus

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Symbol:

Rhoa

Name:

ras homolog family member A

RGD ID:

12568494

Description:

ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN embryonic cleavage (ortholog); establishment or maintenance of actin cytoskeleton polarity (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acute myocardial infarction (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transforming protein RhoA

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	64,239,560 - 64,285,154 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	999,935 - 1,045,681 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	1,000,050 - 1,045,655 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Abnormalities, Drug-Induced (ISO)

acute myocardial infarction (ISO)

Aicardi-Goutieres Syndrome 1 (ISO)

alopecia (ISO)

Animal Disease Models (ISO)

asthma (ISO)

autosomal recessive limb-girdle muscular dystrophy type 2P (ISO)

Brain Injuries (ISO)

breast cancer (ISO)

breast carcinoma (ISO)

carcinoma (ISO)

Cardiomegaly (ISO)

carnitine-acylcarnitine translocase deficiency (ISO)

Cocaine-Related Disorders (ISO)

colorectal cancer (ISO)

congenital diaphragmatic hernia (ISO)

Craniofacial Abnormalities (ISO)

Diabetic Nephropathies (ISO)

ectodermal dysplasia (ISO)

ECTODERMAL DYSPLASIA WITH FACIAL DYSMORPHISM AND ACRAL, OCULAR, AND BRAIN ANOMALIES (ISO)

Experimental Autoimmune Encephalomyelitis (ISO)

Experimental Autoimmune Neuritis (ISO)

Experimental Diabetes Mellitus (ISO)

Experimental Liver Cirrhosis (ISO)

fetal alcohol syndrome (ISO)

Fibrosis (ISO)

genetic disease (ISO)

Germ Cell and Embryonal Neoplasms (ISO)

glycine encephalopathy (ISO)

hypertension (ISO)

Hypopigmentation (ISO)

Immunoblastic Lymphadenopathy (ISO)

Left Ventricular Hypertrophy (ISO)

Leukoencephalopathies (ISO)

Lymphatic Metastasis (ISO)

membranous glomerulonephritis (ISO)

multiple sclerosis (ISO)

Myocardial Reperfusion Injury (ISO)

Neoplasm Invasiveness (ISO)

Neoplasm Metastasis (ISO)

Neurocutaneous Syndromes (ISO)

obesity (ISO)

Optic Nerve Injuries (ISO)

ovarian carcinoma (ISO)

peripheral T-cell lymphoma (ISO)

Pierson syndrome (ISO)

primary biliary cholangitis (ISO)

primary cutaneous T-cell non-Hodgkin lymphoma (ISO)

proteinuria (ISO)

pulmonary hypertension (ISO)

Spinal Cord Injuries (ISO)

Stomach Neoplasms (ISO)

T-cell non-Hodgkin lymphoma (ISO)

tooth disease (ISO)

urinary bladder cancer (ISO)

Urologic Neoplasms (ISO)

withdrawal disorder (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IEA)

alpha-beta T cell lineage commitment (IEA)

androgen receptor signaling pathway (IEA)

angiotensin-mediated vasoconstriction involved in regulation of systemic arterial blood pressure (IEA)

aortic valve formation (IEA)

apical junction assembly (IEA)

apolipoprotein A-I-mediated signaling pathway (IEA)

beta selection (IEA)

bone trabecula morphogenesis (IEA)

cell adhesion (IEA)

cell differentiation (IEA)

cell junction assembly (IEA)

cell migration (IEA)

cell morphogenesis (IEA)

cell-matrix adhesion (IEA)

cellular response to chemokine (IEA)

cellular response to cytokine stimulus (IEA)

cellular response to lipopolysaccharide (IEA)

cerebral cortex cell migration (IEA)

cleavage furrow formation (IEA)

cytoplasmic microtubule organization (IEA)

cytoskeleton organization (IEA)

embryonic cleavage (ISO)

endothelial cell migration (IEA)

endothelial tube lumen extension (IEA)

establishment of epithelial cell apical/basal polarity (IEA)

establishment or maintenance of actin cytoskeleton polarity (ISO)

forebrain radial glial cell differentiation (IEA)

GTP metabolic process (ISO)

kidney development (IEA)

meiotic spindle organization (ISO)

microtubule depolymerization (ISO)

mitotic cleavage furrow formation (IEA)

mitotic spindle assembly (IEA)

motor neuron apoptotic process (IEA)

negative chemotaxis (IEA)

negative regulation of canonical NF-kappaB signal transduction (ISO)

negative regulation of cell migration involved in sprouting angiogenesis (IEA)

negative regulation of cell size (IEA)

negative regulation of cell-substrate adhesion (IEA)

negative regulation of intracellular steroid hormone receptor signaling pathway (IEA)

negative regulation of motor neuron apoptotic process (IEA)

negative regulation of neuron differentiation (ISO)

negative regulation of neuron projection development (ISO)

negative regulation of oxidative phosphorylation (IEA)

negative regulation of reactive oxygen species biosynthetic process (IEA)

negative regulation of synapse assembly (ISO)

negative regulation of vascular associated smooth muscle cell migration (ISO)

negative regulation of vascular associated smooth muscle cell proliferation (ISO)

neuron migration (IEA)

neuron projection morphogenesis (ISO)

odontogenesis (IEA)

ossification involved in bone maturation (IEA)

polar body extrusion after meiotic divisions (ISO)

positive regulation of actin filament polymerization (ISO)

positive regulation of alpha-beta T cell differentiation (IEA)

positive regulation of canonical NF-kappaB signal transduction (IEA)

positive regulation of cell adhesion (ISO)

positive regulation of cell growth (ISO)

positive regulation of cell migration (ISO)

positive regulation of cytokinesis (IEA)

positive regulation of leukocyte adhesion to vascular endothelial cell (IEA)

positive regulation of lipase activity (ISO)

positive regulation of neuron apoptotic process (ISO)

positive regulation of neuron differentiation (IEA)

positive regulation of podosome assembly (IEA)

positive regulation of protein serine/threonine kinase activity (ISO)

positive regulation of smooth muscle contraction (ISO)

positive regulation of stress fiber assembly (IEA,ISO)

positive regulation of T cell migration (IEA)

positive regulation of translation (ISO)

positive regulation of vascular associated smooth muscle contraction (IEA)

positive regulation of vasoconstriction (ISO)

regulation of actin cytoskeleton organization (IEA)

regulation of actin polymerization or depolymerization (ISO)

regulation of calcium ion transport (ISO)

regulation of cell migration (IEA)

regulation of dendrite development (ISO)

regulation of microtubule cytoskeleton organization (IEA)

regulation of modification of postsynaptic actin cytoskeleton (IEA)

regulation of modification of postsynaptic structure (IEA)

regulation of neural precursor cell proliferation (IEA)

regulation of neuron projection development (IEA)

regulation of osteoblast proliferation (IEA)

regulation of systemic arterial blood pressure by endothelin (IEA)

regulation of transcription by RNA polymerase II (IEA)

response to amino acid (ISO)

response to ethanol (ISO)

response to glucocorticoid (ISO)

response to glucose (ISO)

response to hypoxia (ISO)

response to mechanical stimulus (ISO)

response to xenobiotic stimulus (ISO)

Rho protein signal transduction (IEA,ISO)

Roundabout signaling pathway (IEA)

semaphorin-plexin signaling pathway (IEA)

skeletal muscle satellite cell migration (ISS)

skeletal muscle tissue development (IEA)

small GTPase-mediated signal transduction (IEA)

spindle localization (ISO)

stress fiber assembly (IEA)

stress-activated protein kinase signaling cascade (ISO)

substantia nigra development (ISO)

substrate adhesion-dependent cell spreading (IEA)

wound healing, spreading of cells (ISS)

Cellular Component

apical junction complex (IEA)

axon (ISO)

cell cortex (IEA)

cell periphery (IEA)

cleavage furrow (IEA)

cytoplasmic side of plasma membrane (IEA)

cytosol (IEA)

dendrite (ISO)

dendritic spine (ISO)

endosome (IEA)

glutamatergic synapse (IEA)

lamellipodium (IEA)

meiotic spindle (ISO)

membrane (ISO)

neuronal cell body (ISO)

nucleus (IEA)

plasma membrane (IEA)

postsynapse (IEA)

ruffle membrane (IEA)

vesicle (IEA)

Molecular Function

G protein activity (IEA)

GDP binding (ISO)

GTP binding (IEA,ISO)

GTPase activity (IEA)

myosin binding (IEA)

protein binding (ISO)

protein domain specific binding (ISO)

Rho GDP-dissociation inhibitor binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Rhoa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	64,239,560 - 64,285,154 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	999,935 - 1,045,681 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	1,000,050 - 1,045,655 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RHOA
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	49,359,145 - 49,411,976 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	49,359,139 - 49,412,998 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	49,396,578 - 49,449,409 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	49,371,582 - 49,424,530 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	49,371,584 - 49,424,530	NCBI
Celera	3	49,361,450 - 49,414,313 (-)	NCBI		Celera
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	49,456,057 - 49,509,248 (-)	NCBI		HuRef
CHM1_1	3	49,349,388 - 49,402,293 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	49,388,518 - 49,441,355 (-)	NCBI		T2T-CHM13v2.0

Rhoa
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	108,183,359 - 108,215,142 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	108,183,328 - 108,215,133 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	108,306,160 - 108,337,943 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	108,306,129 - 108,337,934 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	108,208,536 - 108,240,270 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	108,164,298 - 108,196,026 (+)	NCBI		MGSCv36	mm8
Celera	9	107,915,249 - 107,947,041 (+)	NCBI		Celera
Cytogenetic Map	9	F2	NCBI
cM Map	9	59.2	NCBI

Rhoa
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	117,870,548 - 117,904,303 (+)	NCBI		GRCr8
mRatBN7.2	8	108,991,926 - 109,025,746 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	108,991,954 - 109,025,746 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	114,643,315 - 114,651,893 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	112,842,642 - 112,851,220 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	110,685,281 - 110,693,860 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	117,082,440 - 117,116,244 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	117,106,576 - 117,116,167 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	116,431,244 - 116,464,932 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	8	108,319,010 - 108,327,586 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Rhoa
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955532	1,300,462 - 1,347,451 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955532	1,300,821 - 1,347,453 (-)	NCBI	ChiLan1.0	ChiLan1.0

RHOA
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	49,336,475 - 49,394,257 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	49,341,246 - 49,398,996 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	49,282,009 - 49,339,887 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	50,362,698 - 50,584,600 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

RHOA
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	39,824,552 - 39,888,089 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	39,824,575 - 39,887,215 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	39,743,026 - 39,805,566 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	40,180,779 - 40,244,414 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	40,180,768 - 40,244,414 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	39,548,346 - 39,611,020 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	39,951,968 - 40,014,480 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	40,231,551 - 40,294,267 (+)	NCBI		UU_Cfam_GSD_1.0

RHOA
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	31,918,834 - 31,986,607 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	31,918,484 - 31,991,207 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	35,149,494 - 35,160,516 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RHOA
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	10,757,381 - 10,809,257 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	10,757,337 - 10,772,704 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	156,205,022 - 156,258,776 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rhoa
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624730	3,316,122 - 3,361,820 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005326918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021727466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040269706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000004550 ⟹ ENSSTOP00000004082

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936529	999,935 - 1,045,681 (-)	Ensembl

RefSeq Acc Id:

XM_005326918 ⟹ XP_005326975

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	64,239,560 - 64,285,073 (-)	NCBI
SpeTri2.0	NW_004936529	1,000,050 - 1,045,655 (-)	NCBI

Sequence:

show sequence

TGGCTGAGCTGTGAGTGCGCGCCCGCACGCGGGGCCACGACTGGCTCCGGCTCGAGCCCGCTGG
GCGCCCGGGGGCGCGCACGTCCCTCCCCGCCCTCCCGCTGCCGCCCGCCCTCCTTCGCTCGCGC
TCCCCGCCCGCAGCCAGCCGCCCTCCGTCGGTTCTTTCGTTAGTCCGCGGTCGTCTCTGGAGCT
ACCTGTCCTCTCCTCAGAGCTTGCGACTCACGGACAGGCGTTCTCGGCGCAAAGAGGCCAGACT
CGGAGTCGTCGTCTGAGCTTTTCATCTGGGAAGTTCAAGGTACTTTGTACAACTTTGGTCACAG
GCCGTGCATTTTGCAGCACATTTGTAAGCTATGGCTGCCATCAGGAAGAAATTGGTGATTGTTG
GTGATGGAGCATGTGGCAAGACATGCTTGCTCATAGTTTTCAGCAAGGACCAGTTCCCAGAAGT
ATATGTGCCTACAGTGTTTGAGAACTATGTGGCAGATATTGAAGTGGATGGAAAGCAGGTAGAG
TTGGCTTTGTGGGACACGGCTGGGCAGGAAGATTATGATCGCCTGAGGCCCCTCTCCTACCCAG
ACACTGATGTTATACTGATGTGTTTCTCCATTGACAGCCCTGATAGTTTAGAAAACATCCCAGA
AAAATGGACTCCAGAAGTCAAGCATTTCTGCCCCAATGTACCCATCATCCTGGTTGGGAATAAG
AAGGATCTTCGGAATGATGAGCACACAAGGCGGGAGTTAGCCAAGATGAAGCAGGAGCCAGTAA
AACCTGAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCCTTTGGGTACATGGAGTGTTCAGC
AAAGACCAAAGATGGAGTGAGGGAGGTTTTTGAAATGGCCACGAGAGCTGCTCTGCAAGCCAGA
CGTGGGAAGAAAAAATCTGGGTGCCTTGTGTTGTGAAACCTTGCTGCAAGCACAGCCCTTATGC
GGTTAATTTTGAAGTGCTGTTTATTAATCTTAGTATATGATTACTGGCCTTTTTCATTTATCTA
TAATTTACCTAAGATTACAAATCAGAAGTCATCTTGCTACCAGTATTTAGAAGCCAAACCATGA
TTAATAATGATGTCCAACCTGTCTGACCTGCCAGAGTTCTTCTGACACTGCTCTAACAGCCCTC
TCTGCACTCCACCTGACACATCAGGCGCTAATTCAAAGAATTTCTTAACTTCTTGCTTCTTTCT
AGAAAGAGAAACGGTAACTTTTGTGAATTAGGCTGTAACTACTTTATAACTAACATGTCCTGCC
TATCATCTGTCAGCTGCAAGGAAATCTGGTGAGTCATCACTTTGGAGCTTTACTCCTCAGCCGA
TTTCATTGGCATAGCTCTGGGGTGGGCATTTAGTTGTTTGAAAGTGTACTCAGCCAGAAAGGCC
CAAGTCCATGCAGCTGTGGCAGAGTTACAGTTCTGTTACTCTGTTAGTTACCTTATAGTTACTG
TGTAATTAGTGCCACTTAATGTATGTTACCAAAAATAAATATATCTATCCCAGATTAGATGTAG
TATTTTTTGTATAATTGGATTTCCTAATACTGATATTTGTCAACCCACAGAAAAGTGTATTGGT
TTTTTAAAAAAGAAAGTGTATTTGGAAATAAAGTCAGATGGAAAATTCATTTTTAAAATTCCCG
TTTTGTCACTTTCTCTGATAAAAGATGGCCATATCACCCTTTTTTGACCCCACATTTCCCAGTA
CCCCTCTCCAGAGCTGAGCAAAGTAAAGTAAATAGGAATTTGGTTTCATGCCTGAAACAATTAG
ACACTTGAAGGTGGCATAACCTCTCACCTAGACTGCAGGGTCTGGCTCTTATTCACAATGCTCC
TTTCTTCTCACTGTATCCAGGTTCCCTCCCAGAGGAACCACCAGTTCTCATGGGTGGCACTTGG
TTTTTCTCTTCTCTCCAGCTGACTAAACTTTTTTTCTGTACCAGTTAATTTTTCCAACTAATAG
AATAAAGGCAGTTTTCTAAACTTCCTG

hide sequence

RefSeq Acc Id:

XM_040269705 ⟹ XP_040125639

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	64,239,560 - 64,285,073 (-)	NCBI

RefSeq Acc Id:

XM_040269706 ⟹ XP_040125640

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	64,239,560 - 64,285,154 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005326975	(Get FASTA)	NCBI Sequence Viewer
	XP_040125639	(Get FASTA)	NCBI Sequence Viewer
	XP_040125640	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000004082.3
GenBank Protein	KAG3270465	(Get FASTA)	NCBI Sequence Viewer
	KAG3270466	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005326975 ⟸ XM_005326918
- UniProtKB:	I3M4G3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTR RELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKKSGCLV L hide sequence

RefSeq Acc Id:	XP_040125640 ⟸ XM_040269706
- UniProtKB:	I3M4G3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040125639 ⟸ XM_040269705
- UniProtKB:	I3M4G3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000004082 ⟸ ENSSTOT00000004550

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000004561	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000004550.3	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
	Small_GTPase_Rho	UniProtKB/TrEMBL
NCBI Gene	Rhoa	ENTREZGENE
PANTHER	PTHR24072	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	I3M4G3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - PID (archival)