Advanced Search (OLGA)

Gene: Slc5a7 (solute carrier family 5 member 7) Ictidomys tridecemlineatus

Analyze

Symbol:

Slc5a7

Name:

solute carrier family 5 member 7

RGD ID:

12484743

Description:

ENCODES a protein that exhibits choline binding (inferred); choline transmembrane transporter activity (inferred); choline:sodium symporter activity (inferred); INVOLVED IN acetylcholine biosynthetic process (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH asthma (ortholog); autosomal dominant distal hereditary motor neuronopathy 7 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); clathrin-coated endocytic vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

high affinity choline transporter 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	93,916,550 - 93,940,811 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936729	1,511,836 - 1,536,200 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936729	1,511,648 - 1,534,042 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

asthma (ISO)

autosomal dominant distal hereditary motor neuronopathy 7 (ISO)

Charcot-Marie-Tooth disease (ISO)

Charcot-Marie-Tooth disease type 2 (ISO)

congenital myasthenic syndrome (ISO)

congenital myasthenic syndrome 20 (ISO)

depressive disorder (ISO)

ectodermal dysplasia 10A (ISO)

ectodermal dysplasia 10B (ISO)

ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, SUSCEPTIBILITY TO, 3 (ISO)

genetic disease (ISO)

major depressive disorder (ISO)

prostate cancer (ISO)

spinal muscular atrophy (ISO)

Transplant Rejection (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acetylcholine biosynthetic process (IEA,ISO)

choline transport (IEA)

in utero embryonic development (IEA)

monoatomic ion transport (IEA)

neuromuscular synaptic transmission (IEA)

sodium ion transport (IEA)

synaptic transmission, cholinergic (IEA)

transmembrane transport (IEA)

Cellular Component

apical plasma membrane (ISO)

axon (IEA,ISO)

clathrin-coated endocytic vesicle (ISO)

dendrite (IEA,ISO)

early endosome (ISO)

early endosome membrane (IEA)

membrane (IEA)

neuromuscular junction (IEA)

neuronal cell body (IEA)

perikaryon (IEA,ISO)

plasma membrane (IEA)

plasma membrane raft (ISO)

presynapse (IEA)

presynaptic membrane (IEA)

synapse (IEA)

synaptic vesicle (ISO)

synaptic vesicle membrane (IEA)

Molecular Function

choline binding (IEA)

choline transmembrane transporter activity (IEA)

choline:sodium symporter activity (IEA)

protein binding (ISO)

symporter activity (IEA)

transmembrane transporter activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

acetylcholine signaling pathway via muscarinic acetylcholine receptor (ISO)

acetylcholine signaling pathway via nicotinic acetylcholine receptor (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Slc5a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	93,916,550 - 93,940,811 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936729	1,511,836 - 1,536,200 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936729	1,511,648 - 1,534,042 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC5A7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	107,986,524 - 108,013,994 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	107,986,523 - 108,013,994 (+)	Ensembl			hg38	GRCh38
GRCh37	2	108,602,980 - 108,630,450 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	107,969,427 - 107,996,876 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	108,061,512 - 108,088,957	NCBI
Celera	2	102,911,066 - 102,938,509 (+)	NCBI		Celera
Cytogenetic Map	2	q12.3	NCBI
HuRef	2	102,202,059 - 102,229,471 (+)	NCBI		HuRef
CHM1_1	2	108,606,867 - 108,634,740 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	108,448,101 - 108,475,570 (+)	NCBI		T2T-CHM13v2.0

Slc5a7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	54,580,618 - 54,606,071 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	54,580,618 - 54,606,062 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	54,273,590 - 54,299,038 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	54,273,590 - 54,299,034 (-)	Ensembl			mm10	GRCm38
MGSCv37	17	54,412,915 - 54,438,359 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	53,749,658 - 53,773,230 (-)	NCBI		MGSCv36	mm8
Celera	17	57,690,527 - 57,715,838 (-)	NCBI		Celera
Cytogenetic Map	17	C	NCBI
cM Map	17	28.23	NCBI

Slc5a7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	7,922,693 - 7,953,509 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	7,922,697 - 7,953,509 (-)	Ensembl				GRCr8
mRatBN7.2	9	7,595,440 - 7,626,258 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	7,595,444 - 7,626,258 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	10,642,717 - 10,673,490 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	14,881,214 - 14,911,984 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	13,632,603 - 13,663,363 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	5,294,377 - 5,330,822 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	5,294,381 - 5,330,815 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	4,342,128 - 4,379,724 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	133,838 - 165,943 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	3,418,007 - 3,448,801 (-)	NCBI		Celera
RGSC_v3.1	9	133,837 - 165,939 (+)	NCBI
Cytogenetic Map	9	q11	NCBI

Slc5a7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	11,673,465 - 11,697,163 (+)	Ensembl
ChiLan1.0	NW_004955470	11,673,491 - 11,694,404 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC5A7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	19,921,057 - 19,948,593 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	19,923,825 - 19,951,361 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	93,917,086 - 93,944,308 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	109,018,073 - 109,045,292 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	109,017,805 - 109,046,860 (+)	Ensembl			panPan2	panpan1.1

SLC5A7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	35,879,880 - 35,908,203 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	35,883,245 - 35,908,569 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	35,802,105 - 35,829,230 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	36,734,146 - 36,761,272 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	36,737,513 - 36,762,849 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	36,467,972 - 36,495,096 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	36,749,953 - 36,777,069 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	36,938,435 - 36,965,586 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

SLC5A7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	47,996,335 - 48,022,379 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	47,994,116 - 48,020,744 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	50,164,607 - 50,190,998 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC5A7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	11,346,281 - 11,373,754 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	11,347,861 - 11,370,297 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	179,149,064 - 179,175,860 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc5a7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	11,347,609 - 11,371,330 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	11,347,602 - 11,371,113 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005339087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010001352	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000006028 ⟹ ENSSTOP00000005395

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936729	1,511,836 - 1,536,200 (+)	Ensembl

RefSeq Acc Id:

XM_005339087 ⟹ XP_005339144

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024406292	93,916,550 - 93,940,811 (+)	NCBI
SpeTri2.0	NW_004936729	1,511,648 - 1,534,042 (+)	NCBI

Sequence:

show sequence

CTCCTTGGGACGGCAGGGAGGTTCCTAGTTTTGCCCCGTGTCTCATCACCCACCTGCCGCTTGT
GTGCACAGATATCCGAGTTTCCACCAGGAACTTCTGTGTGCGAATCGGGGCGCAGGTAATAGCC
CTGGCTGTGAGACCAACAGAATAAAAGCGAACAAGAGTGCCAGGCCGCTAAGGACTTAGCACTT
GACATCTGTCTTTTAAGAGTTTTGCGTTTGAATACCCTCGGCCCTCTGCTCTGATTTTAGGCAA
CACATTTTTAAATCATTTTCTTATAGATACCACTAATGGGGATGTGTGAAATGAAGGAAGAACA
ATGGAAGCCTTAATGAAGTAGCCAACTGCGGAAGAATCTGGACCCTTAGTTAAAAATGGCTTTC
CACGTGGAAGGACTGATAGCTATCATCATATTCTACCTTCTCATTTTGCTGGTTGGAATATGGG
CTGCGTGGAGGACCAAAAACAGTGGCAGCGCAGAAGAACGCAGCGAAGCCATAATAGTTGGTGG
GCGAGACATTGGCTTGTTAGTTGGTGGATTTACCATGACAGCCACGTGGGTTGGAGGAGGGTAT
ATCAATGGGACAGCTGAAGCAGTTTATGTACCAGATTATGGCCTAGCTTGGGCTCAGGCACCCA
TTGGATATTCACTTAGTCTGGTTTTAGGTGGTCTGTTCTTTGCAAAACCCATGCGTTCCAAGGG
ATATGTGACCATGCTAGACCCATTTCAGCAGATCTATGGAAAGCGCATGGGTGGGCTCCTATTC
ATCCCTGCGCTAATGGGAGAAATGTTCTGGGCTGCTGCAATTTTCTCTGCACTAGGGGCCACCA
TCAGCGTGATCATTGACGTGGATGTGCATGCTTCGGTCATTGTGTCGGCCCTCATTGCCACTCT
GTACACCCTGGTGGGTGGTCTCTACTCTGTGGCCTACACAGACGTCGTTCAGCTCTTTTGCATT
TTTGTCGGACTGTGGATCAGTGTCCCCTTTGCCCTGTCACATCCTGCCGTCTCTGACATTGGAT
TTACTGCTGTACACACCAAATACCAGGAGCCCTGGCTGGGGACCATTGAGTCCTATGAAATCTA
CACGTGGCTTGATAGTTTCCTGTTGTTGATTCTGGGTGGAATCCCGTGGCAGGCGTACTTCCAG
AGAGTCCTCTCCTCGTCCTCAGCCACCTACGCTCAGGTGCTGTCCTTCTTGGCGGCTTTCGGGT
GCCTGGTGATGGCTCTGCCAGCCGTCCTCATTGGGGCCATTGGCGCATCAACAGACTGGAACCA
GACTGCATACGGGCTTCCAGATCCTAAGACGAATGAAGAAGCAGACATGATTTTACCGATTGTT
TTGCAGTATCTCTGCCCTGTGTACATTTCTTTCTTCGGCCTTGGTGCTGTGTCTGCTGCTGTTA
TGTCTTCAGCTGATTCTTCCATCTTGTCAGCAAGTTCAATGTTTGCTCGGAACATCTACCAGCT
TTCCTTCAGACAAAATGCATCGGACAGGGAAATTGTCTGGGTCATGCGGATCACGGTGTTTGTG
TTTGGAGCATCTGCGACAGCCATGGCCCTGCTGACCAAGACCGTGTACGGGCTCTGGTACCTGA
GCTCCGACCTTGTCTACATCATCATCTTCCCACAGCTGCTCTGTGTGCTCTTCGTCAAGGGCAC
CAACACGTACGGGGCCGCAGCAGGTTACGTTTCTGGGCTCTTCCTGAGAATCACTGGAGGGGAG
CCGTACCTGTACCTGCAGCCCTTGATCTTCTACCCTGGTTATTACTCTGATAAGAACGGAATCT
ATAACCAGAGATTCCCGTTTAAGACTCTTGCCATGCTCACCTCATTCCTGGCTAACATCGGTGT
CTCTTATCTAACCAAATACCTATTTGAAAGGGGAACCTTGCCGCCCAAATTAGATGTATTTGAT
GCTGTTGTTGCAAGGCACAGTGAAGAAAACATGGATAAGACAATTCTGGTCAAAAATGAGAATA
TTAAACTGAATGAACTTGCGCCTGTGAAGCCTCGACAGAGCGTAACTCTCAGCTCCACGTTCAC
CAACAAAGAGGCCCTTCTTGACATGGACTCCAGTCCAGAAGGCTCTGGGACTGAAGATAATCTA
CAATGACACCATCTAAATGAAATACTGCTTTTGCAAACAGAGCACTCTAGTAGGACAGTCCTGG
AAAGATGGTTCATGGCACATATAATACATATTAAAATTATAAACAACGTTCAAGAGAACAAAAT
CCTTGCCAAAAAAAATATGAATATGTACTAAAGGAGGGATTCAGGAAAAGTCATGTGCCATTGC
ACAAATACAGACTAAGCTAGAAGGAAGCAGCTATGAATTTTATTTTTTGATTTCATTTTATTTC
TCATCCATAGTAGTTTCTATTTTGACACTAGATAGTTTTGTTAGGAATATAAAAATGAAAATGC
CCCAAAGAAAAGATGGCCCAATTATTTATCATTTTTTATGGAAAAACAGTGTCCCGATGAAAGA
GCCTAAGAAAGGAAATTGGATGATTTTGACCCAAACTTTGTCAATGCACTTTTTAATGACCAGT
GTTAATGCACTGGTGAGTCAGATTGTCAGACTGAGGCTCTGAGAATAACTCACAGCTACTCTGA
TGAATGATGTAATGAGTTAACCAGTTGATTTTTCTTGATATAATGGTTAACCCCTTCTTTCGTG
GTCTGAACTGAAACATTTGCTGAATATGCAATCTCCACTCCCCCCCCTGTAGCGCAGGGGATCC
AACCCAATGTCTTAAGCATCTAGGCAAGTTCTCTGCTGCTAAGCTACACACTCAGCCCTGTAAT
CTGTCATTCTTTGAGTAATGGCATGTATTTTTCTGAGCACAGGCGAAGCAAAACACAAAAATTA
TTTCATAGTGGCACCTTTTTTTTATGTGCAAGATGATAGAAAAGAGAGGTAATTTTGGAAAAAG
AACACTGGGATCCTTTGAGTACGTCCATAACTAACATGTGTGTAGATAATAATACCTGGAGCAT
AGCAAAATTATTAGGCGAATTTACAGCAATAAATCAAGAAGGACATTAAACAAAAAGTGATATG
AAGAGATAAAAGAGACATTTTTATCTTCAACTGAAGTATATACAGTTTTGTTGCATGATAAAAG
AAGTAGTATTTTGGGTAACTATTCAAACCAGGATTGGAAGTGAAAATGGGCCATGGGTAAGGAG
CAGTAGCTACGCAATACCATTATGGTCCATGAGAGACAGACTACTAGATTAACATGTGTTAACA
GAAGTTCCCAAAGCACCTCCTCATAGTAAAATTGGAAAAACAAATCACACTTATTGTTTTATAT
TCATTCATGGGGTGACCTAGTATTATGGGATCTGCTCTGTGGCACTTTTTTGCATAAGCCAGGT
TTAGATATTGGATGGAAATTTTATATTGAATTTTAAAATGTGACCCAAAGTGGAAAGTAAAAAT
AAGTTCTAAAAGGAAGAAGCCATCAATTTTAACACTTGATGTGTACATAGTTTTCATGAGGTCA
GCCATTATTATTTTACTCCTTTTCTGGAGTTAAAATACATATATATCTATA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005339144	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000005395.2

RefSeq Acc Id:

XP_005339144 ⟸ XM_005339087

- UniProtKB:

I3M756 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAFHVEGLIAIIIFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVG
GGYINGTAEAVYVPDYGLAWAQAPIGYSLSLVLGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGG
LLFIPALMGEMFWAAAIFSALGATISVIIDVDVHASVIVSALIATLYTLVGGLYSVAYTDVVQL
FCIFVGLWISVPFALSHPAVSDIGFTAVHTKYQEPWLGTIESYEIYTWLDSFLLLILGGIPWQA
YFQRVLSSSSATYAQVLSFLAAFGCLVMALPAVLIGAIGASTDWNQTAYGLPDPKTNEEADMIL
PIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDREIVWVMRIT
VFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFVKGTNTYGAAAGYVSGLFLRIT
GGEPYLYLQPLIFYPGYYSDKNGIYNQRFPFKTLAMLTSFLANIGVSYLTKYLFERGTLPPKLD
VFDAVVARHSEENMDKTILVKNENIKLNELAPVKPRQSVTLSSTFTNKEALLDMDSSPEGSGTE
DNLQ

hide sequence

Ensembl Acc Id:

ENSSTOP00000005395 ⟸ ENSSTOT00000006028

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000006024	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000006028.3	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1730.10	UniProtKB/TrEMBL
InterPro	Choline_transporter	UniProtKB/TrEMBL
	Na/Glc_symporter_sf	UniProtKB/TrEMBL
	Na/solute_symporter	UniProtKB/TrEMBL
KEGG Report	iti:101970012	UniProtKB/TrEMBL
NCBI Gene	Slc5a7	ENTREZGENE
PANTHER	HIGH AFFINITY CHOLINE TRANSPORTER 1	UniProtKB/TrEMBL
	HIGH-AFFINITY CHOLINE TRANSPORTER 1	UniProtKB/TrEMBL
Pfam	SSF	UniProtKB/TrEMBL
PROSITE	NA_SOLUT_SYMP_3	UniProtKB/TrEMBL
UniProt	I3M756	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations