Ucp3 (uncoupling protein 3) - Rat Genome Database

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Gene: Ucp3 (uncoupling protein 3) Ictidomys tridecemlineatus
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Symbol: Ucp3
Name: uncoupling protein 3
RGD ID: 12476680
Description: ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); oxidative phosphorylation uncoupler activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); fatty acid metabolic process (ortholog); response to activity (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria type 7b (ortholog); congestive heart failure (ortholog); coronary restenosis (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: mitochondrial uncoupling protein 3; uncoupling protein 3, transcript variant X1; uncoupling protein 3, transcript variant X2; uncoupling protein 3, transcript variant X3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494761,482,972 - 61,496,412 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364983,082,575 - 3,095,737 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364983,082,575 - 3,095,739 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ucp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494761,482,972 - 61,496,412 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364983,082,575 - 3,095,737 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364983,082,575 - 3,095,739 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UCP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381174,000,277 - 74,009,085 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1174,000,277 - 74,009,085 (-)EnsemblGRCh38hg38GRCh38
GRCh371173,711,322 - 73,720,130 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361173,388,985 - 73,397,778 (-)NCBINCBI36Build 36hg18NCBI36
Build 341173,392,374 - 73,397,778NCBI
Celera1171,018,129 - 71,027,086 (-)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1170,007,226 - 70,016,183 (-)NCBIHuRef
CHM1_11173,595,177 - 73,604,136 (-)NCBICHM1_1
T2T-CHM13v2.01173,929,606 - 73,938,415 (-)NCBIT2T-CHM13v2.0
Ucp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397100,122,198 - 100,135,639 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7100,122,197 - 100,135,639 (+)EnsemblGRCm39 Ensembl
GRCm387100,472,991 - 100,486,432 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7100,472,990 - 100,486,432 (+)EnsemblGRCm38mm10GRCm38
MGSCv377107,621,500 - 107,634,941 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367100,347,073 - 100,360,514 (+)NCBIMGSCv36mm8
Celera7100,810,580 - 100,824,026 (+)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.36NCBI
Ucp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81164,227,910 - 164,240,893 (+)NCBIGRCr8
mRatBN7.21154,815,777 - 154,828,764 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1154,815,777 - 154,828,762 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1162,810,789 - 162,823,741 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01169,990,890 - 170,003,842 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01162,864,787 - 162,877,739 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01165,482,912 - 165,495,895 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1165,482,155 - 165,496,206 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01171,683,566 - 171,697,139 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,896,001 - 157,909,608 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11157,974,793 - 157,988,399 (+)NCBI
Celera1152,898,320 - 152,911,676 (+)NCBICelera
RH 3.4 Map11258.1RGD
Cytogenetic Map1q32NCBI
Ucp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541417,558,889 - 17,578,737 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541417,558,889 - 17,578,108 (+)NCBIChiLan1.0ChiLan1.0
UCP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2974,941,880 - 74,953,797 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11175,986,899 - 75,998,075 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01169,072,143 - 69,085,424 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11172,380,180 - 72,389,274 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1172,380,180 - 72,389,274 (-)Ensemblpanpan1.1panPan2
UCP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12124,272,522 - 24,290,304 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2124,277,896 - 24,288,639 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2124,049,763 - 24,055,700 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02124,484,075 - 24,496,484 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2124,484,070 - 24,496,484 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12124,284,466 - 24,290,404 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02124,484,328 - 24,490,265 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02124,399,875 - 24,405,814 (+)NCBIUU_Cfam_GSD_1.0
UCP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl98,378,021 - 8,386,211 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.198,378,023 - 8,389,452 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.299,167,483 - 9,178,955 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap9p21-p24NCBI
UCP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,269,611 - 65,279,079 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl165,269,607 - 65,278,807 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604360,587,459 - 60,596,911 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000004882   ⟹   ENSSTOP00000004377
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364983,082,575 - 3,095,737 (-)Ensembl
RefSeq Acc Id: XM_005323185   ⟹   XP_005323242
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494761,482,972 - 61,496,412 (-)NCBI
SpeTri2.0NW_0049364983,082,575 - 3,095,739 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005323186   ⟹   XP_005323243
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494761,482,972 - 61,496,412 (-)NCBI
SpeTri2.0NW_0049364983,082,575 - 3,095,739 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005323242 (Get FASTA)   NCBI Sequence Viewer  
  XP_005323243 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000004377.2
GenBank Protein KAG3286129 (Get FASTA)   NCBI Sequence Viewer  
  KAG3286130 (Get FASTA)   NCBI Sequence Viewer  
  KAG3286131 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005323242   ⟸   XM_005323185
- UniProtKB: I3M515 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005323243   ⟸   XM_005323186
- UniProtKB: I3M515 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000004377   ⟸   ENSSTOT00000004882


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000004880 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000004882.3 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mit_carrier UniProtKB/TrEMBL
  Mito_Metabolite_Transporter UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
NCBI Gene Ucp3 ENTREZGENE
PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED UniProtKB/TrEMBL
  MITOCHONDRIAL UNCOUPLING PROTEIN 3 UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS MTUNCOUPLING UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt I3M515 ENTREZGENE, UniProtKB/TrEMBL