LOC101974652 (PWWP domain-containing protein 2A-like) - Rat Genome Database

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Gene: LOC101974652 (PWWP domain-containing protein 2A-like) Ictidomys tridecemlineatus
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Symbol: LOC101974652
Name: PWWP domain-containing protein 2A-like
RGD ID: 12476654
Description: ENCODES a protein that exhibits chromatin binding (inferred); FOUND IN chromocenter (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: PWWP domain-containing protein 2A pseudogene
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053012,256,635 - 2,259,388 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049380086 - 1,284 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromocenter  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_040293063   ⟹   XP_040148997
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244053012,256,635 - 2,259,388 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040148997 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000029293.1
  ENSSTOP00000032302.1
RefSeq Acc Id: XP_040148997   ⟸   XM_040293063
- UniProtKB: A0A287DFL6 (UniProtKB/TrEMBL)
Protein Domains
PWWP


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000030462 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000032979.1 UniProtKB/TrEMBL
  ENSSTOT00000033040.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.140 UniProtKB/TrEMBL
InterPro PWWP_dom UniProtKB/TrEMBL
NCBI Gene LOC101974652 ENTREZGENE
PANTHER METHYL-CPG BINDING PROTEIN, DROSOPHILA UniProtKB/TrEMBL
  PWWP DOMAIN-CONTAINING PROTEIN 2B UniProtKB/TrEMBL
Pfam PWWP UniProtKB/TrEMBL
PROSITE PWWP UniProtKB/TrEMBL
SMART PWWP UniProtKB/TrEMBL
Superfamily-SCOP Tudor/PWWP/MBT UniProtKB/TrEMBL
UniProt A0A287D6X8_ICTTR UniProtKB/TrEMBL
  A0A287DFL6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC101974652  PWWP domain-containing protein 2A-like  LOC101974652  PWWP domain-containing protein 2A pseudogene  Symbol and/or name change 5135510 APPROVED
2017-07-13 LOC101974652  PWWP domain-containing protein 2A pseudogene    PWWP domain-containing protein 2A-like  Symbol and/or name change 5135510 APPROVED