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Gene: BCL11B (BCL11 transcription factor B) Canis lupus familiaris

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Symbol:

BCL11B

Name:

BCL11 transcription factor B

RGD ID:

12343557

Description:

ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); RNA polymerase II cis-regulatory region sequence-specific DNA binding (inferred); INVOLVED IN alpha-beta T cell differentiation (inferred); apoptotic process (inferred); axonogenesis (inferred); ASSOCIATED WITH autism spectrum disorder (ortholog); combined immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN neuron projection (inferred); nucleus (inferred); SWI/SNF complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

B cell CLL/lymphoma 11B; B-cell CLL/lymphoma 11B; B-cell CLL/lymphoma 11B (zinc finger protein); B-cell lymphoma/leukemia 11B; BAF chromatin remodeling complex subunit BCL11B; BCL11B, BAF complex component

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	67,622,592 - 67,713,922 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	67,622,708 - 67,714,404 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	67,145,953 - 67,237,226 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	67,909,299 - 68,000,574 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	67,909,387 - 68,001,543 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	67,570,743 - 67,661,895 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	67,636,646 - 67,728,187 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	68,033,837 - 68,125,174 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

combined immunodeficiency (ISO)

COVID-19 (ISO)

genetic disease (ISO)

immunodeficiency 49 (ISO)

INTELLECTUAL DEVELOPMENTAL DISORDER WITH SPEECH DELAY, DYSMORPHIC FACIES, AND T-CELL ABNORMALITIES (ISO)

lymphoma (ISO)

microcephaly (ISO)

T-cell acute lymphoblastic leukemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

alpha-beta T cell differentiation (IEA)

apoptotic process (IEA)

axonogenesis (IEA)

central nervous system neuron differentiation (IEA)

commitment of neuronal cell to specific neuron type in forebrain (IEA)

epithelial cell morphogenesis (IEA)

hematopoietic stem cell migration (IEA)

keratinocyte development (IEA)

lymphoid lineage cell migration into thymus (IEA)

negative regulation of cell population proliferation (IEA)

negative regulation of T cell apoptotic process (IEA)

negative regulation of thymocyte apoptotic process (IEA)

odontogenesis of dentin-containing tooth (IEA)

olfactory bulb axon guidance (IEA)

positive regulation of transcription by RNA polymerase II (IBA,IEA)

positive T cell selection (IEA)

post-embryonic camera-type eye development (IEA)

post-embryonic development (IEA)

regulation of gene expression (IEA)

regulation of keratinocyte proliferation (IEA)

regulation of lipid metabolic process (IEA)

regulation of neuron differentiation (IEA)

skin development (IEA)

striatal medium spiny neuron differentiation (IEA)

T cell apoptotic process (IEA)

T cell differentiation in thymus (IEA)

T cell receptor V(D)J recombination (IEA)

thymocyte apoptotic process (IEA)

thymus development (IEA)

transcription by RNA polymerase II (IEA)

Cellular Component

neuron projection (IEA)

nucleus (IBA,IEA)

SWI/SNF complex (IEA)

Molecular Function

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (IBA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IEA)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

BCL11B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	67,622,592 - 67,713,922 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	67,622,708 - 67,714,404 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	67,145,953 - 67,237,226 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	67,909,299 - 68,000,574 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	67,909,387 - 68,001,543 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	67,570,743 - 67,661,895 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	67,636,646 - 67,728,187 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	68,033,837 - 68,125,174 (-)	NCBI		UU_Cfam_GSD_1.0

BCL11B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	99,169,287 - 99,272,197 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	99,169,287 - 99,272,197 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	99,635,624 - 99,738,534 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	98,705,377 - 98,807,575 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	98,705,376 - 98,807,575	NCBI
Celera	14	79,691,368 - 79,793,512 (-)	NCBI		Celera
Cytogenetic Map	14	q32.2	NCBI
HuRef	14	79,819,226 - 79,921,464 (-)	NCBI		HuRef
CHM1_1	14	99,573,389 - 99,675,578 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	93,400,844 - 93,503,767 (-)	NCBI		T2T-CHM13v2.0

Bcl11b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	107,876,662 - 107,970,404 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	107,876,662 - 107,969,861 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	107,910,403 - 108,004,145 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	107,910,403 - 108,003,602 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	109,148,613 - 109,241,624 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	108,363,030 - 108,451,028 (-)	NCBI		MGSCv36	mm8
Celera	12	109,151,974 - 109,245,238 (-)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	59.1	NCBI

Bcl11b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	132,598,968 - 132,692,123 (-)	NCBI		GRCr8
mRatBN7.2	6	126,834,531 - 126,927,720 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	126,834,531 - 126,928,224 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	126,958,692 - 127,050,867 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	127,253,714 - 127,345,900 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	126,612,161 - 126,704,296 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	131,834,097 - 131,927,251 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	131,834,097 - 131,926,272 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	141,004,477 - 141,097,643 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	132,292,671 - 132,384,572 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	132,296,789 - 132,389,378 (-)	NCBI
Celera	6	124,393,881 - 124,486,186 (-)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

Bcl11b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	20,564,449 - 20,637,103 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955438	20,562,345 - 20,637,662 (-)	NCBI	ChiLan1.0	ChiLan1.0

BCL11B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	100,325,797 - 100,429,008 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	99,542,293 - 99,645,444 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	79,795,262 - 79,898,472 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	99,122,231 - 99,205,962 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

Bcl11b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	6,972,307 - 7,063,288 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936604	3,023,844 - 3,110,083 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936604	3,023,781 - 3,110,104 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BCL11B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	120,205,008 - 120,295,936 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	120,205,008 - 120,295,737 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	127,759,537 - 127,855,267 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BCL11B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	77,122,591 - 77,222,562 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	77,122,689 - 77,221,454 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	64,224,342 - 64,347,710 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bcl11b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	4,560,699 - 4,647,858 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	4,560,362 - 4,649,219 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in BCL11B
1197 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005623788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005623789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005623790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005623791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038484177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038484178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038484179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038545691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038609787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038674606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000028248 ⟹ ENSCAFP00000026270

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	8	67,622,708 - 67,714,404 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000044077 ⟹ ENSCAFP00000042957

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	8	67,622,708 - 67,714,404 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845006895 ⟹ ENSCAFP00845005492

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	8	67,909,387 - 68,001,543 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845006902 ⟹ ENSCAFP00845005498

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	8	67,909,387 - 68,001,543 (-)	Ensembl

RefSeq Acc Id:

XM_005623788 ⟹ XP_005623845

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	8	67,622,592 - 67,713,922 (-)	NCBI
Dog10K_Boxer_Tasha	8	67,145,953 - 67,237,226 (-)	NCBI

Sequence:

show sequence

GCGGCGGCGGCGGCGGCGGCGGCGGCTCGGACCCCCTCCCCTGGCTCCCCCCATCAGTGCAGCT
CTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCA
CTTGTCCCAGAGGGAGCTCATCACCCAGGCTGACCATGTGGAGGCCGCCATCCTTGAAGAAGAT
GAGGGTCTGGAGATAGAGGAGCCCAGCAGCCTGGGGCTGATGGTGGGTGGCCCCGACCCTGACC
TGCTCACCTGTGGACAGTGTCAGATGAACTTCCCCCTGGGGGACATCCTGGTTTTTATAGAGCA
CAAGAAGAAGCAGTGTGGCGGCAGCCTGGGTGCTTGCTATGACAAAGGCCTGGACAAGGGCAGC
CCGCCGCCCTCCTCGCGCTCCGAGCTCAGGAAAGTGTCCGAGCCGGTGGAGATCGGGATCCAGG
TCACCCCCGACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGCCCCAAGCAGGAGAA
CATTGCAGGGCCGTGCAGGCCTGCCCAGCTGCCAGCGACGGCCCCCATAGCTGCCTCCTCCCAC
CCTCACTCATCCGTGATCACTCCACCTCTGCGCACCCTGGGCGCCCTGCCGCCCTGCTTCCCCC
TGCCGTGCTGCAGCGCGCGCCCGGTCTCGGGTGACGGGACTCAGGGTGAGGGTCAGACGGAGGC
TCCCTTTGGATGCCAGTGTCAGTTGTCAGGTAAAGATGAGCCTTCCAGCTACATTTGCACAACA
TGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCC
GCATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCACCATCCCGCCGCC
GCTGGGACCCGAGGCCGTGGCCCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCCCTTC
AACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGC
CCGGCACGCCGCCGCTCTTCAGCCCGCCGCCGCGCCACCACCTGGACCCGCACCGCCTCAGTGC
CGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAGTCATGCGCCTCAACCCC
ATGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCT
CCACGCCGCCGCCCGTGTCTCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCA
GCCCAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCCCCGGGGGCACG
CCGCCGCCGCAGCCGCCCGCCAAGAGCAAGTCGTGCGAGTTCTGCGGCAAGACCTTCAAGTTCC
AGAGCAATCTCATCGTGCACCGGCGCAGCCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTG
CGACCACGCGTGCTCGCAGGCGAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAGGCC
GGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTCCCCCGAGCCCGGCACCA
GCGAGCTGGCCGGCGAGGGCCTCAAGGCGGCCGACGGCGACTTCCGCCACCACGAGAGCGACCC
GTCGCTGGGCCACGAGCCCGAGGAGGACGACGAGGAGGAGGAGGAGGAGGAGGAGGAGCTGCTG
CTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCG
AGAACGGCGGCGTGGGCGGGGTGGGCGTGGGCGTGGGCGGGGTGGGGGGCGTGGGCGTGGGCGT
GGCGGGCGGCGTGGGCGTGGGCGTGGGCGGCGCGGCCAAGGCGCTGGCCGACGAGAAGGCGCTG
GTGCTGGGCAAGGTCATGGAGAACGTGGGGCTGGGCGCGCTGCCGCAGTACGGCGAGCTGCTGG
CCGACAAGCCCAAGCGCGGCGCCTTCCTCAAGCGCACCCCGGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGGGACGCGGGCGACGACGACGACGCGGGCGGCTGCGGGGACGCGGGCCCCGGCGGCGCG
GTCAACGGGCGCGGCGGCGGCTTCGCGCCGGGCGCCGAGCCCTTCCCGGGGCTGTTCCCGCGCA
AGCCGGCGCCGCTGCCCAGCCCCGGGCTCAACAGCGCGGCCAAGCGCATCAAGGTGGAGAAGGA
CCTGGAGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTCGTGGGC
TACGCCGCGTCGCGGCACTTCATGAAGGACCCGTTCCTGGGCTTCACGGACGCGCGCCAGTCGC
CCTTCGCCACGTCGTCCGAGCACTCGTCCGAGAACGGCAGCCTGCGCTTCTCCACGCCGCCCGG
GGACCTGCTGGACGGCGGGCTGTCGGGCCGCAGCGGCACGGCCAGCGGGGGCAGCACGCCGCAC
CTGGGCGGCCCGGGCCCCGGGCGGCCGAGCTCCAAGGAGGGCCGGCGCAGCGACACGTGCGAGT
ACTGCGGCAAGGTGTTCAAGAACTGCAGCAACCTGACGGTGCACCGGCGGAGCCACACCGGCGA
GCGGCCTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCAC
ATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCA
GCGTCTACAGCACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGA
CGTCAAAATCGAGCAGGCCGAGAGGAGCTAAGCGCGCGCAAGCGCGCAAGCGCGTGCGGGCGCC
GCGCCCCTGCACGGGGAGCCGTTGCCAAGCGACAGAACGCTGACCCGACGACGGACGCCCGCCC
CCGCGTCTGCGCAGCCGCG

hide sequence

RefSeq Acc Id:

XM_005623789 ⟹ XP_005623846

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	8	67,622,592 - 67,713,922 (-)	NCBI
Dog10K_Boxer_Tasha	8	67,145,953 - 67,237,226 (-)	NCBI

Sequence:

show sequence

GCGGCGGCGGCGGCGGCGGCGGCGGCTCGGACCCCCTCCCCTGGCTCCCCCCATCAGTGCAGCT
CTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCA
CTTGTCCCAGAGGGAGCTCATCACCCCAGAGGCTGACCATGTGGAGGCCGCCATCCTTGAAGAA
GATGAGGGTCTGGAGATAGAGGAGCCCAGCAGCCTGGGGCTGATGGTGGGTGGCCCCGACCCTG
ACCTGCTCACCTGTGGACAGTGTCAGATGAACTTCCCCCTGGGGGACATCCTGGTTTTTATAGA
GCACAAGAAGAAGCAGTGTGGCGGCAGCCTGGGTGCTTGCTATGACAAAGGCCTGGACAAGGGC
AGCCCGCCGCCCTCCTCGCGCTCCGAGCTCAGGAAAGTGTCCGAGCCGGTGGAGATCGGGATCC
AGGTCACCCCCGACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGCCCCAAGCAGGA
GAACATTGCAGGTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAAC
AGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCCGCATCTACCTGGAGCCCG
GGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCACCATCCCGCCGCCGCTGGGACCCGAGGCCGT
GGCCCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACG
GGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCCGGCACGCCGCCGCTCT
TCAGCCCGCCGCCGCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGGGGCTCGT
CGCCCAGCACCCCAGTGCCTTCGACCGAGTCATGCGCCTCAACCCCATGGCCATCGACTCGCCC
GCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTGT
CTCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCAGCCCAGCCCCAAGTCCCC
GTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCCCCGGGGGCACGCCGCCGCCGCAGCCGCCC
GCCAAGAGCAAGTCGTGCGAGTTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGC
ACCGGCGCAGCCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGTGCTCGCA
GGCGAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAGGCCGGCTCGCTGGCCGGCCGC
TCCGACGACGGGCTCTCGGCCGCCAGCTCCCCCGAGCCCGGCACCAGCGAGCTGGCCGGCGAGG
GCCTCAAGGCGGCCGACGGCGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCC
CGAGGAGGACGACGAGGAGGAGGAGGAGGAGGAGGAGGAGCTGCTGCTGGAGAACGAGAGCCGG
CCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGGCGTGGGCG
GGGTGGGCGTGGGCGTGGGCGGGGTGGGGGGCGTGGGCGTGGGCGTGGCGGGCGGCGTGGGCGT
GGGCGTGGGCGGCGCGGCCAAGGCGCTGGCCGACGAGAAGGCGCTGGTGCTGGGCAAGGTCATG
GAGAACGTGGGGCTGGGCGCGCTGCCGCAGTACGGCGAGCTGCTGGCCGACAAGCCCAAGCGCG
GCGCCTTCCTCAAGCGCACCCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGACGCGGGCGA
CGACGACGACGCGGGCGGCTGCGGGGACGCGGGCCCCGGCGGCGCGGTCAACGGGCGCGGCGGC
GGCTTCGCGCCGGGCGCCGAGCCCTTCCCGGGGCTGTTCCCGCGCAAGCCGGCGCCGCTGCCCA
GCCCCGGGCTCAACAGCGCGGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCCGCCCGC
CGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTCGTGGGCTACGCCGCGTCGCGGCAC
TTCATGAAGGACCCGTTCCTGGGCTTCACGGACGCGCGCCAGTCGCCCTTCGCCACGTCGTCCG
AGCACTCGTCCGAGAACGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGG
GCTGTCGGGCCGCAGCGGCACGGCCAGCGGGGGCAGCACGCCGCACCTGGGCGGCCCGGGCCCC
GGGCGGCCGAGCTCCAAGGAGGGCCGGCGCAGCGACACGTGCGAGTACTGCGGCAAGGTGTTCA
AGAACTGCAGCAACCTGACGGTGCACCGGCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGA
GCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGGGCAG
ATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGTCTACAGCACCCTGG
AGAAACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGACGTCAAAATCGAGCAGGC
CGAGAGGAGCTAAGCGCGCGCAAGCGCGCAAGCGCGTGCGGGCGCCGCGCCCCTGCACGGGGAG
CCGTTGCCAAGCGACAGAACGCTGACCCGACGACGGACGCCCGCCCCCGCGTCTGCGCAGCCGC
G

hide sequence

RefSeq Acc Id:

XM_005623791 ⟹ XP_005623848

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	8	67,622,592 - 67,713,922 (-)	NCBI
Dog10K_Boxer_Tasha	8	67,145,953 - 67,237,226 (-)	NCBI

Sequence:

show sequence

GCGGCGGCGGCGGCGGCGGCGGCGGCTCGGACCCCCTCCCCTGGCTCCCCCCATCAGTGCAGCT
CTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCA
CTTGTCCCAGAGGGAGCTCATCACCCCAGAGGCTGACCATGTGGAGGCCGCCATCCTTGAAGAA
GATGAGGGTCTGGAGATAGAGGAGCCCAGCAGCCTGGGGCTGATGGTGGGTGGCCCCGACCCTG
ACCTGCTCACCTGTGGACAGTGTCAGATGAACTTCCCCCTGGGGGACATCCTGGTTTTTATAGA
GCACAAGAAGAAGCAGTGTGGCGGCAGCCTGGGTGCTTGCTATGACAAAGGCCTGGACAAGGGC
AGCCCGCCGCCCTCCTCGCGCTCCGAGCTCAGGAAAGTGTCCGAGCCGGTGGAGATCGGGATCC
AGGTCACCCCCGACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGCCCCAAGCAGGA
GAACATTGCAGGGCCGTGCAGGCCTGCCCAGCTGCCAGCGACGGCCCCCATAGCTGCCTCCTCC
CACCCTCACTCATCCGTGATCACTCCACCTCTGCGCACCCTGGGCGCCCTGCCGCCCTGCTTCC
CCCTGCCGTGCTGCAGCGCGCGCCCGGTCTCGGGTGACGGGACTCAGGGTGAGGGTCAGACGGA
GGCTCCCTTTGGATGCCAGTGTCAGTTGTCAGGTAAAGATGAGCCTTCCAGCTACATTTGCACA
ACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCT
TCCGCATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCACCATCCCGCC
GCCGCTGGGACCCGAGGCCGTGGCCCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCCC
TTCAACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCC
TGCCCGGCACGCCGCCGCTCTTCAGCCCGCCGCCGCGCCACCACCTGGACCCGCACCGCCTCAG
TGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAGTCATGCGCCTCAAC
CCCATGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCAACA
GCTCCACGCCGCCGCCCGTGTCTCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTT
CCAGCCCAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCCCCGGGGGC
ACGCCGCCGCCGCAGCCGCCCGCCAAGAGCAAGTCGTGCGAGTTCTGCGGCAAGACCTTCAAGT
TCCAGAGCAATCTCATCGTGCACCGGCGCAGCCACACGGGCGAGAAGCCCTACAAGTGCCAGCT
GTGCGACCACGCGTGCTCGCAGGCGAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAG
GCCGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTCCCCCGAGCCCGGCA
CCAGCGAGCTGGCCGGCGAGGGCCTCAAGGCGGCCGACGGCGACTTCCGCCACCACGAGAGCGA
CCCGTCGCTGGGCCACGAGCCCGAGGAGGACGACGAGGAGGAGGAGGAGGAGGAGGAGGAGCTG
CTGCTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACC
GCGAGAACGGCGGCGTGGGCGGGGTGGGCGTGGGCGTGGGCGGGGTGGGGGGCGTGGGCGTGGG
CGTGGCGGGCGGCGTGGGCGTGGGCGTGGGCGGCGCGGCCAAGGCGCTGGCCGACGAGAAGGCG
CTGGTGCTGGGCAAGGTCATGGAGAACGTGGGGCTGGGCGCGCTGCCGCAGTACGGCGAGCTGC
TGGCCGACAAGCCCAAGCGCGGCGCCTTCCTCAAGCGCACCCCGGGCGGCGGCGGCGGCGGCGG
CGGCGGCGGGGACGCGGGCGACGACGACGACGCGGGCGGCTGCGGGGACGCGGGCCCCGGCGGC
GCGGTCAACGGGCGCGGCGGCGGCTTCGCGCCGGGCGCCGAGCCCTTCCCGGGGCTGTTCCCGC
GCAAGCCGGCGCCGCTGCCCAGCCCCGGGCTCAACAGCGCGGCCAAGCGCATCAAGGTGGAGAA
GGACCTGGAGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTCGTG
GGCTACGCCGCGTCGCGGCACTTCATGAAGGACCCGTTCCTGGGCTTCACGGACGCGCGCCAGT
CGCCCTTCGCCACGTCGTCCGAGCACTCGTCCGAGAACGGCAGCCTGCGCTTCTCCACGCCGCC
CGGGGACCTGCTGGACGGCGGGCTGTCGGGCCGCAGCGGCACGGCCAGCGGGGGCAGCACGCCG
CACCTGGGCGGCCCGGGCCCCGGGCGGCCGAGCTCCAAGGAGGGCCGGCGCAGCGACACGTGCG
AGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACCTGACGGTGCACCGGCGGAGCCACACCGG
CGAGCGGCCTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGC
CACATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCT
TCAGCGTCTACAGCACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAA
CGACGTCAAAATCGAGCAGGCCGAGAGGAGCTAAGCGCGCGCAAGCGCGCAAGCGCGTGCGGGC
GCCGCGCCCCTGCACGGGGAGCCGTTGCCAAGCGACAGAACGCTGACCCGACGACGGACGCCCG
CCCCCGCGTCTGCGCAGCCGCG

hide sequence

RefSeq Acc Id:

XM_038484177 ⟹ XP_038340105

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	8	67,570,743 - 67,661,895 (-)	NCBI

RefSeq Acc Id:

XM_038484178 ⟹ XP_038340106

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	8	67,570,743 - 67,661,895 (-)	NCBI

RefSeq Acc Id:

XM_038484179 ⟹ XP_038340107

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	8	67,570,743 - 67,661,895 (-)	NCBI

RefSeq Acc Id:

XM_038545688 ⟹ XP_038401616

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	68,033,837 - 68,125,174 (-)	NCBI

RefSeq Acc Id:

XM_038545689 ⟹ XP_038401617

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	68,033,837 - 68,125,174 (-)	NCBI

RefSeq Acc Id:

XM_038545691 ⟹ XP_038401619

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	8	68,033,837 - 68,125,174 (-)	NCBI

RefSeq Acc Id:

XM_038609787 ⟹ XP_038465715

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	8	67,636,646 - 67,728,187 (-)	NCBI

RefSeq Acc Id:

XM_038674604 ⟹ XP_038530532

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	67,909,299 - 68,000,574 (-)	NCBI

RefSeq Acc Id:

XM_038674605 ⟹ XP_038530533

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	67,909,299 - 68,000,574 (-)	NCBI

RefSeq Acc Id:

XM_038674606 ⟹ XP_038530534

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	8	67,909,299 - 68,000,574 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005623845	(Get FASTA)	NCBI Sequence Viewer
	XP_005623846	(Get FASTA)	NCBI Sequence Viewer
	XP_005623848	(Get FASTA)	NCBI Sequence Viewer
	XP_038340105	(Get FASTA)	NCBI Sequence Viewer
	XP_038340106	(Get FASTA)	NCBI Sequence Viewer
	XP_038340107	(Get FASTA)	NCBI Sequence Viewer
	XP_038401616	(Get FASTA)	NCBI Sequence Viewer
	XP_038401617	(Get FASTA)	NCBI Sequence Viewer
	XP_038401619	(Get FASTA)	NCBI Sequence Viewer
	XP_038465715	(Get FASTA)	NCBI Sequence Viewer
	XP_038530532	(Get FASTA)	NCBI Sequence Viewer
	XP_038530533	(Get FASTA)	NCBI Sequence Viewer
	XP_038530534	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000026270.6
	ENSCAFP00000042957.3
	ENSCAFP00030012398.1
	ENSCAFP00030012442.1
	ENSCAFP00040000919.1
	ENSCAFP00040000933.1
	ENSCAFP00845005492
	ENSCAFP00845005492.1
	ENSCAFP00845005498
	ENSCAFP00845005498.1

RefSeq Acc Id:	XP_005623845 ⟸ XM_005623788
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3RT61 (UniProtKB/TrEMBL), A0A8P0NJ09 (UniProtKB/TrEMBL), A0A8C0REY3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRRKQGNPQHLSQRELITQADHVEAAILEEDEGLEIEEPSSLGLMVGGPDPDLLTCGQCQMNF PLGDILVFIEHKKKQCGGSLGACYDKGLDKGSPPPSSRSELRKVSEPVEIGIQVTPDEDDHLLS PTKGICPKQENIAGPCRPAQLPATAPIAASSHPHSSVITPPLRTLGALPPCFPLPCCSARPVSG DGTQGEGQTEAPFGCQCQLSGKDEPSSYICTTCKQPFNSAWFLLQHAQNTHGFRIYLEPGPASS SLTPRLTIPPPLGPEAVAQSPLMNFLGDSNPFNLLRMTGPILRDHPGFGEGRLPGTPPLFSPPP RHHLDPHRLSAEEMGLVAQHPSAFDRVMRLNPMAIDSPAMDFSRRLRELAGNSSTPPPVSPGRG NPMHRLLNPFQPSPKSPFLSTPPLPPMPPGGTPPPQPPAKSKSCEFCGKTFKFQSNLIVHRRSH TGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSLAGRSDDGLSAASSPEPGTSELAGEGLKAA DGDFRHHESDPSLGHEPEEDDEEEEEEEEELLLENESRPESSFSMDSELSRNRENGGVGGVGVG VGGVGGVGVGVAGGVGVGVGGAAKALADEKALVLGKVMENVGLGALPQYGELLADKPKRGAFLK RTPGGGGGGGGGGDAGDDDDAGGCGDAGPGGAVNGRGGGFAPGAEPFPGLFPRKPAPLPSPGLN SAAKRIKVEKDLELPPAALIPSENVYSQWLVGYAASRHFMKDPFLGFTDARQSPFATSSEHSSE NGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSN LTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMK KWHGEHLLTNDVKIEQAERS hide sequence

RefSeq Acc Id:	XP_005623846 ⟸ XM_005623789
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KB90 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRRKQGNPQHLSQRELITPEADHVEAAILEEDEGLEIEEPSSLGLMVGGPDPDLLTCGQCQMN FPLGDILVFIEHKKKQCGGSLGACYDKGLDKGSPPPSSRSELRKVSEPVEIGIQVTPDEDDHLL SPTKGICPKQENIAGKDEPSSYICTTCKQPFNSAWFLLQHAQNTHGFRIYLEPGPASSSLTPRL TIPPPLGPEAVAQSPLMNFLGDSNPFNLLRMTGPILRDHPGFGEGRLPGTPPLFSPPPRHHLDP HRLSAEEMGLVAQHPSAFDRVMRLNPMAIDSPAMDFSRRLRELAGNSSTPPPVSPGRGNPMHRL LNPFQPSPKSPFLSTPPLPPMPPGGTPPPQPPAKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPY KCQLCDHACSQASKLKRHMKTHMHKAGSLAGRSDDGLSAASSPEPGTSELAGEGLKAADGDFRH HESDPSLGHEPEEDDEEEEEEEEELLLENESRPESSFSMDSELSRNRENGGVGGVGVGVGGVGG VGVGVAGGVGVGVGGAAKALADEKALVLGKVMENVGLGALPQYGELLADKPKRGAFLKRTPGGG GGGGGGGDAGDDDDAGGCGDAGPGGAVNGRGGGFAPGAEPFPGLFPRKPAPLPSPGLNSAAKRI KVEKDLELPPAALIPSENVYSQWLVGYAASRHFMKDPFLGFTDARQSPFATSSEHSSENGSLRF STPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRR SHTGERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMKKWHGEH LLTNDVKIEQAERS hide sequence

RefSeq Acc Id:	XP_005623848 ⟸ XM_005623791
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0REY3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRRKQGNPQHLSQRELITPEADHVEAAILEEDEGLEIEEPSSLGLMVGGPDPDLLTCGQCQMN FPLGDILVFIEHKKKQCGGSLGACYDKGLDKGSPPPSSRSELRKVSEPVEIGIQVTPDEDDHLL SPTKGICPKQENIAGPCRPAQLPATAPIAASSHPHSSVITPPLRTLGALPPCFPLPCCSARPVS GDGTQGEGQTEAPFGCQCQLSGKDEPSSYICTTCKQPFNSAWFLLQHAQNTHGFRIYLEPGPAS SSLTPRLTIPPPLGPEAVAQSPLMNFLGDSNPFNLLRMTGPILRDHPGFGEGRLPGTPPLFSPP PRHHLDPHRLSAEEMGLVAQHPSAFDRVMRLNPMAIDSPAMDFSRRLRELAGNSSTPPPVSPGR GNPMHRLLNPFQPSPKSPFLSTPPLPPMPPGGTPPPQPPAKSKSCEFCGKTFKFQSNLIVHRRS HTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSLAGRSDDGLSAASSPEPGTSELAGEGLKA ADGDFRHHESDPSLGHEPEEDDEEEEEEEEELLLENESRPESSFSMDSELSRNRENGGVGGVGV GVGGVGGVGVGVAGGVGVGVGGAAKALADEKALVLGKVMENVGLGALPQYGELLADKPKRGAFL KRTPGGGGGGGGGGDAGDDDDAGGCGDAGPGGAVNGRGGGFAPGAEPFPGLFPRKPAPLPSPGL NSAAKRIKVEKDLELPPAALIPSENVYSQWLVGYAASRHFMKDPFLGFTDARQSPFATSSEHSS ENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCS NLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHM KKWHGEHLLTNDVKIEQAERS hide sequence

Ensembl Acc Id:

ENSCAFP00000026270 ⟸ ENSCAFT00000028248

Ensembl Acc Id:

ENSCAFP00000042957 ⟸ ENSCAFT00000044077

RefSeq Acc Id:	XP_038340106 ⟸ XM_038484178
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038340107 ⟸ XM_038484179
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038340105 ⟸ XM_038484177
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038465715 ⟸ XM_038609787
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038530533 ⟸ XM_038674605
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3RT61 (UniProtKB/TrEMBL), A0A8P0NJ09 (UniProtKB/TrEMBL), A0A8C0REY3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038530534 ⟸ XM_038674606
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KB90 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038530532 ⟸ XM_038674604
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0REY3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401617 ⟸ XM_038545689
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0REY3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401619 ⟸ XM_038545691
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KB90 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038401616 ⟸ XM_038545688
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0REY3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845005498 ⟸ ENSCAFT00845006902

Ensembl Acc Id:

ENSCAFP00845005492 ⟸ ENSCAFT00845006895

Protein Domains

C2H2-type

Promoters

RGD ID:

13684333

Promoter ID:

EPDNEW_C2402

Type:

initiation region

Name:

BCL11B_1

Description:

B cell CLL/lymphoma 11B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	8	67,713,935 - 67,713,995	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000017809	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007762	UniProtKB/TrEMBL
	ENSCAFG00040000625	UniProtKB/TrEMBL
	ENSCAFG00845003846	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000028248.7	UniProtKB/TrEMBL
	ENSCAFT00000044077.4	UniProtKB/TrEMBL
	ENSCAFT00030014215.1	UniProtKB/TrEMBL
	ENSCAFT00030014266.1	UniProtKB/TrEMBL
	ENSCAFT00040001096.1	UniProtKB/TrEMBL
	ENSCAFT00040001109.1	UniProtKB/TrEMBL
	ENSCAFT00845006895	ENTREZGENE
	ENSCAFT00845006895.1	UniProtKB/TrEMBL
	ENSCAFT00845006902	ENTREZGENE
	ENSCAFT00845006902.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Dev/Hematopoietic_TF	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	cfa:612476	UniProtKB/TrEMBL
NCBI Gene	BCL11B	ENTREZGENE
PANTHER	B-CELL LYMPHOMA/LEUKEMIA 11	UniProtKB/TrEMBL
	B-CELL LYMPHOMA/LEUKEMIA 11B	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8C0KB90	ENTREZGENE
	A0A8C0PLL9_CANLF	UniProtKB/TrEMBL
	A0A8C0REY3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MQJ1_CANLF	UniProtKB/TrEMBL
	A0A8I3RT61	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NJ09	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SWE5_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:57981	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-12-12	BCL11B	BCL11 transcription factor B	BCL11B	BAF chromatin remodeling complex subunit BCL11B	Symbol and/or name change	19259463	PROVISIONAL
2019-01-30	BCL11B	BAF chromatin remodeling complex subunit BCL11B		BCL11B, BAF complex component	Symbol and/or name change	5135510	APPROVED
2018-11-06	BCL11B	BCL11B, BAF complex component		B cell CLL/lymphoma 11B	Symbol and/or name change	5135510	APPROVED
2017-12-19	BCL11B	B cell CLL/lymphoma 11B		B-cell CLL/lymphoma 11B	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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