LOC102152234 (V-type proton ATPase subunit e 1-like) - Rat Genome Database

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Gene: LOC102152234 (V-type proton ATPase subunit e 1-like) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC102152234
Name: V-type proton ATPase subunit e 1-like
RGD ID: 12321528
Description: ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN proton transmembrane transport (inferred); FOUND IN membrane (inferred); proton-transporting V-type ATPase, V0 domain (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: V-type proton ATPase subunit e 1 pseudogene
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1844,000,587 - 44,002,292 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha843,683,962 - 43,685,667 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0844,223,999 - 44,225,704 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1843,838,391 - 43,840,082 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0843,911,776 - 43,913,481 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0844,272,129 - 44,273,834 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC102152234
17 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_038483626   ⟹   XP_038339554
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1843,838,391 - 43,840,082 (-)NCBI
RefSeq Acc Id: XM_038545095   ⟹   XP_038401023
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0844,272,129 - 44,273,834 (-)NCBI
RefSeq Acc Id: XM_038589914   ⟹   XP_038445842
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha843,683,962 - 43,685,667 (-)NCBI
RefSeq Acc Id: XM_038609200   ⟹   XP_038465128
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0843,911,776 - 43,913,481 (-)NCBI
RefSeq Acc Id: XM_038674026   ⟹   XP_038529954
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0844,223,999 - 44,225,704 (-)NCBI
RefSeq Acc Id: XP_038339554   ⟸   XM_038483626
RefSeq Acc Id: XP_038465128   ⟸   XM_038609200
RefSeq Acc Id: XP_038529954   ⟸   XM_038674026
- UniProtKB: A0A8C0JX47 (UniProtKB/TrEMBL),   A0A8C0PGQ9 (UniProtKB/TrEMBL),   A0A8I3MW85 (UniProtKB/TrEMBL),   A0A8C0SR00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038445842   ⟸   XM_038589914
- UniProtKB: A0A8C0JX47 (UniProtKB/TrEMBL),   A0A8C0PGQ9 (UniProtKB/TrEMBL),   A0A8I3MW85 (UniProtKB/TrEMBL),   A0A8C0SR00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401023   ⟸   XM_038545095
- UniProtKB: A0A8C0JX47 (UniProtKB/TrEMBL),   A0A8C0PGQ9 (UniProtKB/TrEMBL),   A0A8C0SR00 (UniProtKB/TrEMBL),   A0A8I3MW85 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016617 UniProtKB/TrEMBL
  ENSCAFG00030025678 UniProtKB/TrEMBL
  ENSCAFG00040015112 UniProtKB/TrEMBL
  ENSCAFG00845004319 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000026315.2 UniProtKB/TrEMBL
  ENSCAFT00030047407.1 UniProtKB/TrEMBL
  ENSCAFT00040027840.1 UniProtKB/TrEMBL
  ENSCAFT00845007775 ENTREZGENE
  ENSCAFT00845007775.1 UniProtKB/TrEMBL
InterPro ATPase_V0-cplx_e1/e2_su UniProtKB/TrEMBL
  ATPase_V0-cplx_e1/e2_su_met UniProtKB/TrEMBL
NCBI Gene LOC102152234 ENTREZGENE
PANTHER PTHR12263 UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE SUBUNIT E 1 UniProtKB/TrEMBL
Pfam ATP_synt_H UniProtKB/TrEMBL
PIRSF V-ATP_synth_e1/e2 UniProtKB/TrEMBL
UniProt A0A8C0JX47 ENTREZGENE
  A0A8C0PGQ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SR00 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MW85 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC102152234  V-type proton ATPase subunit e 1-like  LOC102152234  V-type proton ATPase subunit e 1 pseudogene  Symbol and/or name change 5135510 APPROVED