EIF5A (eukaryotic translation initiation factor 5A) - Rat Genome Database

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Gene: EIF5A (eukaryotic translation initiation factor 5A) Canis lupus familiaris
Analyze
Symbol: EIF5A
Name: eukaryotic translation initiation factor 5A
RGD ID: 12284352
Description: ENCODES a protein that exhibits U6 snRNA binding (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); cellular response to virus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN annulate lamellae (ortholog); dendrite (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: eukaryotic translation initiation factor 5A-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,268,103 - 32,272,970 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,405,817 - 32,410,703 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,373,168 - 32,378,059 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,372,977 - 32,378,002 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,338,605 - 32,343,491 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,297,394 - 32,302,267 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,474,419 - 32,479,302 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
EIF5A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,268,103 - 32,272,970 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,405,817 - 32,410,703 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,373,168 - 32,378,059 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,372,977 - 32,378,002 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,338,605 - 32,343,491 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,297,394 - 32,302,267 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,474,419 - 32,479,302 (+)NCBIUU_Cfam_GSD_1.0
EIF5A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,306,999 - 7,312,463 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,306,999 - 7,312,463 (+)EnsemblGRCh38hg38GRCh38
GRCh37177,210,318 - 7,215,782 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,151,693 - 7,156,498 (+)NCBINCBI36Build 36hg18NCBI36
Build 34177,151,692 - 7,156,496NCBI
Celera177,236,257 - 7,241,723 (+)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef177,104,783 - 7,109,831 (+)NCBIHuRef
CHM1_1177,219,093 - 7,224,550 (+)NCBICHM1_1
T2T-CHM13v2.0177,210,983 - 7,216,447 (+)NCBIT2T-CHM13v2.0
Eif5a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,807,538 - 69,812,784 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,807,540 - 69,812,784 (-)EnsemblGRCm39 Ensembl
GRCm381169,916,712 - 69,921,958 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,916,714 - 69,921,958 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,730,214 - 69,735,460 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,732,917 - 69,737,536 (-)NCBIMGSCv36mm8
Celera1177,464,600 - 77,469,965 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.92NCBI
Eif5a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81055,138,821 - 55,143,272 (-)NCBIGRCr8
mRatBN7.21054,640,104 - 54,644,845 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,640,024 - 54,644,656 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1059,302,660 - 59,307,064 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01058,791,232 - 58,795,636 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01054,298,539 - 54,302,941 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01056,527,075 - 56,531,615 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,527,085 - 56,531,483 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,272,194 - 56,276,934 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,760,289 - 56,764,689 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11056,773,911 - 56,778,625 (-)NCBI
Celera1053,794,046 - 53,798,461 (-)NCBICelera
Cytogenetic Map10q24NCBI
Eif5a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554679,603,800 - 9,608,490 (-)NCBIChiLan1.0ChiLan1.0
EIF5A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21914,903,844 - 14,909,346 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11716,869,683 - 16,875,178 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0177,341,076 - 7,346,570 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1177,327,363 - 7,333,270 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,327,363 - 7,333,270 (+)Ensemblpanpan1.1panPan2
Eif5a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,129,875 - 47,134,887 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936595604,268 - 609,075 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF5A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11252,659,040 - 52,664,686 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23139,934,584 - 139,940,476 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EIF5A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,685,908 - 6,691,159 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605914,719,550 - 14,724,974 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif5a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247869,933,325 - 9,938,178 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in EIF5A
23 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005619970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005619971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005619972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038514988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_843935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00845037001   ⟹   ENSCAFP00845028971
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl532,372,977 - 32,378,002 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845037066   ⟹   ENSCAFP00845029025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl532,373,961 - 32,378,002 (+)Ensembl
RefSeq Acc Id: XM_005619970   ⟹   XP_005620027
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1532,268,871 - 32,272,970 (+)NCBI
Dog10K_Boxer_Tasha532,406,584 - 32,410,703 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005619971   ⟹   XP_005620028
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1532,269,300 - 32,272,970 (+)NCBI
Dog10K_Boxer_Tasha532,407,023 - 32,410,703 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005619972   ⟹   XP_005620029
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1532,268,103 - 32,272,970 (+)NCBI
Dog10K_Boxer_Tasha532,405,817 - 32,410,703 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038475495   ⟹   XP_038331423
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1532,338,967 - 32,343,491 (+)NCBI
RefSeq Acc Id: XM_038475496   ⟹   XP_038331424
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1532,339,372 - 32,343,491 (+)NCBI
RefSeq Acc Id: XM_038475497   ⟹   XP_038331425
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1532,339,810 - 32,343,491 (+)NCBI
RefSeq Acc Id: XM_038475499   ⟹   XP_038331427
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1532,339,504 - 32,343,491 (+)NCBI
RefSeq Acc Id: XM_038475500   ⟹   XP_038331428
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1532,338,605 - 32,343,491 (+)NCBI
RefSeq Acc Id: XM_038514988   ⟹   XP_038370916
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha532,406,716 - 32,410,703 (+)NCBI
RefSeq Acc Id: XM_038536661   ⟹   XP_038392589
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0532,474,781 - 32,479,302 (+)NCBI
RefSeq Acc Id: XM_038536662   ⟹   XP_038392590
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0532,475,186 - 32,479,302 (+)NCBI
RefSeq Acc Id: XM_038536663   ⟹   XP_038392591
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0532,475,627 - 32,479,302 (+)NCBI
RefSeq Acc Id: XM_038536664   ⟹   XP_038392592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0532,475,318 - 32,479,302 (+)NCBI
RefSeq Acc Id: XM_038536665   ⟹   XP_038392593
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0532,474,419 - 32,479,302 (+)NCBI
RefSeq Acc Id: XM_038600843   ⟹   XP_038456771
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0532,297,756 - 32,302,267 (+)NCBI
RefSeq Acc Id: XM_038600844   ⟹   XP_038456772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0532,298,164 - 32,302,267 (+)NCBI
RefSeq Acc Id: XM_038600845   ⟹   XP_038456773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0532,298,596 - 32,302,267 (+)NCBI
RefSeq Acc Id: XM_038600846   ⟹   XP_038456774
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0532,298,296 - 32,302,267 (+)NCBI
RefSeq Acc Id: XM_038600847   ⟹   XP_038456775
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0532,297,394 - 32,302,267 (+)NCBI
RefSeq Acc Id: XM_038665384   ⟹   XP_038521312
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0532,373,530 - 32,378,059 (+)NCBI
RefSeq Acc Id: XM_038665385   ⟹   XP_038521313
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0532,373,935 - 32,378,059 (+)NCBI
RefSeq Acc Id: XM_038665386   ⟹   XP_038521314
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0532,374,378 - 32,378,059 (+)NCBI
RefSeq Acc Id: XM_038665387   ⟹   XP_038521315
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0532,374,067 - 32,378,059 (+)NCBI
RefSeq Acc Id: XM_038665388   ⟹   XP_038521316
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0532,373,168 - 32,378,059 (+)NCBI
RefSeq Acc Id: XM_843935   ⟹   XP_849028
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1532,268,476 - 32,272,970 (+)NCBI
Dog10K_Boxer_Tasha532,406,179 - 32,410,703 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005620027 (Get FASTA)   NCBI Sequence Viewer  
  XP_005620028 (Get FASTA)   NCBI Sequence Viewer  
  XP_005620029 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331423 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331424 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331425 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331427 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331428 (Get FASTA)   NCBI Sequence Viewer  
  XP_038370916 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392589 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392590 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392591 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392592 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392593 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456771 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456773 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456774 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456775 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521312 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521313 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521314 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521315 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521316 (Get FASTA)   NCBI Sequence Viewer  
  XP_849028 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000023771.4
  ENSCAFP00000061695.1
  ENSCAFP00030020565.1
  ENSCAFP00030020617.1
  ENSCAFP00040006873.1
  ENSCAFP00040006879.1
  ENSCAFP00845028971
  ENSCAFP00845028971.1
  ENSCAFP00845029025
  ENSCAFP00845029025.1
RefSeq Acc Id: XP_005620029   ⟸   XM_005619972
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_849028   ⟸   XM_843935
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005620027   ⟸   XM_005619970
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005620028   ⟸   XM_005619971
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038331428   ⟸   XM_038475500
RefSeq Acc Id: XP_038331423   ⟸   XM_038475495
RefSeq Acc Id: XP_038331424   ⟸   XM_038475496
RefSeq Acc Id: XP_038331427   ⟸   XM_038475499
RefSeq Acc Id: XP_038331425   ⟸   XM_038475497
RefSeq Acc Id: XP_038456775   ⟸   XM_038600847
RefSeq Acc Id: XP_038456771   ⟸   XM_038600843
RefSeq Acc Id: XP_038456772   ⟸   XM_038600844
RefSeq Acc Id: XP_038456774   ⟸   XM_038600846
RefSeq Acc Id: XP_038456773   ⟸   XM_038600845
RefSeq Acc Id: XP_038521316   ⟸   XM_038665388
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038521312   ⟸   XM_038665384
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038521313   ⟸   XM_038665385
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038521315   ⟸   XM_038665387
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038521314   ⟸   XM_038665386
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038370916   ⟸   XM_038514988
- UniProtKB: A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038392593   ⟸   XM_038536665
- UniProtKB: A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038392589   ⟸   XM_038536661
- UniProtKB: A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038392590   ⟸   XM_038536662
- UniProtKB: A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038392592   ⟸   XM_038536664
- UniProtKB: A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038392591   ⟸   XM_038536663
- UniProtKB: A0A8C0K6S7 (UniProtKB/TrEMBL),   A0A8C0NA08 (UniProtKB/TrEMBL),   A0A8C0RIV2 (UniProtKB/TrEMBL),   A0A8I3PFB8 (UniProtKB/TrEMBL),   A0A8I3PLK3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845028971   ⟸   ENSCAFT00845037001
Ensembl Acc Id: ENSCAFP00845029025   ⟸   ENSCAFT00845037066
Promoters
RGD ID:13683222
Promoter ID:EPDNEW_C1289
Type:single initiation site
Name:EIF5A_1
Description:eukaryotic translation initiation factor 5A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1532,270,494 - 32,270,554EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016129 UniProtKB/TrEMBL
  ENSCAFG00030012709 UniProtKB/TrEMBL
  ENSCAFG00040004116 UniProtKB/TrEMBL
  ENSCAFG00845020953 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000025598.5 UniProtKB/TrEMBL
  ENSCAFT00000084662.2 UniProtKB/TrEMBL
  ENSCAFT00030023594.1 UniProtKB/TrEMBL
  ENSCAFT00030023663.1 UniProtKB/TrEMBL
  ENSCAFT00040007882.1 UniProtKB/TrEMBL
  ENSCAFT00040007889.1 UniProtKB/TrEMBL
  ENSCAFT00845037001 ENTREZGENE
  ENSCAFT00845037001.1 UniProtKB/TrEMBL
  ENSCAFT00845037066 ENTREZGENE
  ENSCAFT00845037066.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.30 UniProtKB/TrEMBL
  2.40.50.140 UniProtKB/TrEMBL
InterPro IF5A-like UniProtKB/TrEMBL
  IF5A-like_N UniProtKB/TrEMBL
  NA-bd_OB-fold UniProtKB/TrEMBL
  Rib_L2_dom2 UniProtKB/TrEMBL
  Trans_elong_IF5A_hypusine_site UniProtKB/TrEMBL
  Transl_elong_IF5A_C UniProtKB/TrEMBL
  Translation_prot_SH3-like_sf UniProtKB/TrEMBL
KEGG Report cfa:489468 UniProtKB/TrEMBL
NCBI Gene EIF5A ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5A-1 UniProtKB/TrEMBL
  PTHR11673 UniProtKB/TrEMBL
Pfam eIF-5a UniProtKB/TrEMBL
  IF5A-like_N UniProtKB/TrEMBL
PIRSF eIF5A UniProtKB/TrEMBL
PROSITE IF5A_HYPUSINE UniProtKB/TrEMBL
SMART eIF-5a UniProtKB/TrEMBL
Superfamily-SCOP SSF50104 UniProtKB/TrEMBL
  SSF50249 UniProtKB/TrEMBL
UniProt A0A8C0K6S7 ENTREZGENE
  A0A8C0NA08 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RIV2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PFB8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PLK3 ENTREZGENE, UniProtKB/TrEMBL