ATP6V1C1 (ATPase H+ transporting V1 subunit C1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ATP6V1C1 (ATPase H+ transporting V1 subunit C1) Canis lupus familiaris
Analyze
Symbol: ATP6V1C1
Name: ATPase H+ transporting V1 subunit C1
RGD ID: 12269089
Description: ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN proton transmembrane transport (inferred); synaptic vesicle lumen acidification (inferred); ASSOCIATED WITH Cohen syndrome (ortholog); DOORS syndrome (ortholog); Neoplasm Metastasis (ortholog); FOUND IN apical part of cell (ortholog); extrinsic component of synaptic vesicle membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC106559607; uncharacterized LOC106559607; V-type proton ATPase subunit C 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,509,699 - 4,569,500 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,510,003 - 4,579,846 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha134,513,182 - 4,573,038 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0134,672,415 - 4,733,419 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,672,804 - 4,761,969 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,514,303 - 4,574,155 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,631,627 - 4,691,637 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,644,765 - 4,704,650 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ATP6V1C1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,509,699 - 4,569,500 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,510,003 - 4,579,846 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha134,513,182 - 4,573,038 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0134,672,415 - 4,733,419 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,672,804 - 4,761,969 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,514,303 - 4,574,155 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,631,627 - 4,691,637 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,644,765 - 4,704,650 (+)NCBIUU_Cfam_GSD_1.0
ATP6V1C1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388103,021,083 - 103,073,051 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8103,021,063 - 103,073,051 (+)EnsemblGRCh38hg38GRCh38
GRCh378104,033,311 - 104,085,279 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 368104,102,424 - 104,154,461 (+)NCBINCBI36Build 36hg18NCBI36
Build 348104,102,444 - 104,154,460NCBI
Celera8100,220,060 - 100,272,082 (+)NCBICelera
Cytogenetic Map8q22.3NCBI
HuRef899,233,896 - 99,286,052 (+)NCBIHuRef
CHM1_18104,074,301 - 104,126,315 (+)NCBICHM1_1
T2T-CHM13v2.08104,149,047 - 104,200,988 (+)NCBIT2T-CHM13v2.0
Atp6v1c1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391538,662,096 - 38,692,688 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1538,662,177 - 38,692,690 (+)EnsemblGRCm39 Ensembl
GRCm381538,661,904 - 38,692,444 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1538,661,933 - 38,692,446 (+)EnsemblGRCm38mm10GRCm38
MGSCv371538,591,659 - 38,622,199 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361538,606,543 - 38,636,472 (+)NCBIMGSCv36mm8
Celera1539,288,003 - 39,318,453 (+)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1515.18NCBI
Atp6v1c1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8771,719,326 - 71,757,191 (+)NCBIGRCr8
mRatBN7.2769,834,464 - 69,872,278 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl769,834,463 - 69,872,278 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx771,706,991 - 71,744,745 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0773,909,580 - 73,947,333 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0773,777,596 - 73,815,355 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0777,678,853 - 77,716,658 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl777,678,968 - 77,716,408 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0778,536,306 - 78,574,105 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4774,341,301 - 74,378,806 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1774,362,030 - 74,399,537 (+)NCBI
Celera766,891,594 - 66,929,033 (+)NCBICelera
Cytogenetic Map7q22NCBI
Atp6v1c1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541727,356,483 - 27,375,747 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541727,340,916 - 27,376,541 (+)NCBIChiLan1.0ChiLan1.0
ATP6V1C1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27120,231,629 - 120,435,575 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1895,767,545 - 95,971,505 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0899,521,146 - 99,725,603 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18101,832,538 - 101,883,956 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8101,832,538 - 101,883,956 (+)Ensemblpanpan1.1panPan2
Atp6v1c1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530333,200,336 - 33,249,336 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647040,623,553 - 40,675,598 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647040,626,523 - 40,675,435 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP6V1C1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl434,029,295 - 34,222,405 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1434,033,943 - 34,084,990 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2436,887,066 - 36,917,862 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP6V1C1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1897,878,970 - 97,930,552 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl897,879,019 - 97,926,263 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603942,670,781 - 42,722,372 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp6v1c1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476319,726,841 - 19,769,372 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476319,726,883 - 19,769,247 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ATP6V1C1
499 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005627843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000001002   ⟹   ENSCAFP00000000918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl134,510,003 - 4,553,193 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000060032   ⟹   ENSCAFP00000065343
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl134,510,003 - 4,549,280 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000066642   ⟹   ENSCAFP00000044854
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl134,510,003 - 4,569,058 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000084628   ⟹   ENSCAFP00000044377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl134,510,003 - 4,551,560 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000087119   ⟹   ENSCAFP00000063518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl134,510,003 - 4,579,846 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014566   ⟹   ENSCAFP00845011284
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl134,672,804 - 4,733,986 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014633   ⟹   ENSCAFP00845011335
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl134,672,896 - 4,716,349 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014667   ⟹   ENSCAFP00845011362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl134,672,920 - 4,761,969 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845014710   ⟹   ENSCAFP00845011397
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl134,672,920 - 4,761,969 (+)Ensembl
RefSeq Acc Id: XM_022426601   ⟹   XP_022282309
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1134,510,070 - 4,569,500 (+)NCBI
Dog10K_Boxer_Tasha134,513,571 - 4,573,038 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426602   ⟹   XP_022282310
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1134,509,699 - 4,569,500 (+)NCBI
Dog10K_Boxer_Tasha134,513,182 - 4,573,038 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426603   ⟹   XP_022282311
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1134,510,070 - 4,569,500 (+)NCBI
Dog10K_Boxer_Tasha134,513,571 - 4,573,038 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038424571   ⟹   XP_038280499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha134,513,641 - 4,573,038 (+)NCBI
RefSeq Acc Id: XM_038492990   ⟹   XP_038348918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1134,514,692 - 4,574,155 (+)NCBI
RefSeq Acc Id: XM_038492991   ⟹   XP_038348919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1134,514,759 - 4,574,155 (+)NCBI
RefSeq Acc Id: XM_038492992   ⟹   XP_038348920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1134,514,303 - 4,574,155 (+)NCBI
RefSeq Acc Id: XM_038492993   ⟹   XP_038348921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1134,514,692 - 4,574,155 (+)NCBI
RefSeq Acc Id: XM_038555251   ⟹   XP_038411179
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0134,645,153 - 4,704,650 (+)NCBI
RefSeq Acc Id: XM_038555252   ⟹   XP_038411180
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0134,645,223 - 4,704,650 (+)NCBI
RefSeq Acc Id: XM_038555253   ⟹   XP_038411181
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0134,644,765 - 4,704,650 (+)NCBI
RefSeq Acc Id: XM_038555254   ⟹   XP_038411182
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0134,645,153 - 4,704,650 (+)NCBI
RefSeq Acc Id: XM_038619147   ⟹   XP_038475075
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0134,632,016 - 4,691,637 (+)NCBI
RefSeq Acc Id: XM_038619148   ⟹   XP_038475076
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0134,632,086 - 4,691,637 (+)NCBI
RefSeq Acc Id: XM_038619149   ⟹   XP_038475077
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0134,631,627 - 4,691,637 (+)NCBI
RefSeq Acc Id: XM_038619150   ⟹   XP_038475078
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0134,632,016 - 4,691,637 (+)NCBI
RefSeq Acc Id: XM_038684764   ⟹   XP_038540692
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0134,672,804 - 4,733,419 (+)NCBI
RefSeq Acc Id: XM_038684765   ⟹   XP_038540693
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0134,672,877 - 4,733,419 (+)NCBI
RefSeq Acc Id: XM_038684766   ⟹   XP_038540694
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0134,672,415 - 4,733,419 (+)NCBI
RefSeq Acc Id: XM_038684767   ⟹   XP_038540695
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0134,672,804 - 4,733,419 (+)NCBI
Protein Sequences
Protein RefSeqs XP_022282309 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282310 (Get FASTA)   NCBI Sequence Viewer  
  XP_022282311 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280499 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348920 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348921 (Get FASTA)   NCBI Sequence Viewer  
  XP_038411179 (Get FASTA)   NCBI Sequence Viewer  
  XP_038411180 (Get FASTA)   NCBI Sequence Viewer  
  XP_038411181 (Get FASTA)   NCBI Sequence Viewer  
  XP_038411182 (Get FASTA)   NCBI Sequence Viewer  
  XP_038475075 (Get FASTA)   NCBI Sequence Viewer  
  XP_038475076 (Get FASTA)   NCBI Sequence Viewer  
  XP_038475077 (Get FASTA)   NCBI Sequence Viewer  
  XP_038475078 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540692 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540693 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540694 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540695 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000000918.3
  ENSCAFP00000044377.1
  ENSCAFP00000044854.2
  ENSCAFP00000063518.2
  ENSCAFP00000065343.2
  ENSCAFP00030034019.1
  ENSCAFP00030034104.1
  ENSCAFP00030034168.1
  ENSCAFP00040009836.1
  ENSCAFP00040009867.1
  ENSCAFP00040009912.1
  ENSCAFP00845011284
  ENSCAFP00845011284.1
  ENSCAFP00845011335.1
  ENSCAFP00845011362
  ENSCAFP00845011362.1
  ENSCAFP00845011397.1
RefSeq Acc Id: XP_022282310   ⟸   XM_022426602
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282309   ⟸   XM_022426601
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282311   ⟸   XM_022426603
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PB23 (UniProtKB/TrEMBL),   A0A8I3N328 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000000918   ⟸   ENSCAFT00000001002
Ensembl Acc Id: ENSCAFP00000065343   ⟸   ENSCAFT00000060032
Ensembl Acc Id: ENSCAFP00000044377   ⟸   ENSCAFT00000084628
Ensembl Acc Id: ENSCAFP00000063518   ⟸   ENSCAFT00000087119
Ensembl Acc Id: ENSCAFP00000044854   ⟸   ENSCAFT00000066642
RefSeq Acc Id: XP_038348920   ⟸   XM_038492992
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038348918   ⟸   XM_038492990
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038348921   ⟸   XM_038492993
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038348919   ⟸   XM_038492991
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038475077   ⟸   XM_038619149
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038475075   ⟸   XM_038619147
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038475078   ⟸   XM_038619150
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038475076   ⟸   XM_038619148
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038540694   ⟸   XM_038684766
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540692   ⟸   XM_038684764
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540695   ⟸   XM_038684767
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PB23 (UniProtKB/TrEMBL),   A0A8I3N328 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038540693   ⟸   XM_038684765
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280499   ⟸   XM_038424571
- Peptide Label: isoform X1
- UniProtKB: A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411181   ⟸   XM_038555253
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411179   ⟸   XM_038555251
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411182   ⟸   XM_038555254
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PB23 (UniProtKB/TrEMBL),   A0A8I3N328 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411180   ⟸   XM_038555252
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JNI1 (UniProtKB/TrEMBL),   A0A8C0Q6W5 (UniProtKB/TrEMBL),   A0A8I3NAS2 (UniProtKB/TrEMBL),   A0A8P0PE06 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845011335   ⟸   ENSCAFT00845014633
Ensembl Acc Id: ENSCAFP00845011362   ⟸   ENSCAFT00845014667
Ensembl Acc Id: ENSCAFP00845011397   ⟸   ENSCAFT00845014710
Ensembl Acc Id: ENSCAFP00845011284   ⟸   ENSCAFT00845014566

Promoters
RGD ID:13685567
Promoter ID:EPDNEW_C3633
Type:initiation region
Name:ATP6V1C1_1
Description:ATPase H+ transporting V1 subunit C1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1134,510,096 - 4,510,156EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000000649 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030021231 UniProtKB/TrEMBL
  ENSCAFG00040006084 UniProtKB/TrEMBL
  ENSCAFG00845008268 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000001002.5 UniProtKB/TrEMBL
  ENSCAFT00000060032.2 UniProtKB/TrEMBL
  ENSCAFT00000066642.2 UniProtKB/TrEMBL
  ENSCAFT00000084628.2 UniProtKB/TrEMBL
  ENSCAFT00000087119.2 UniProtKB/TrEMBL
  ENSCAFT00030039005.1 UniProtKB/TrEMBL
  ENSCAFT00030039097.1 UniProtKB/TrEMBL
  ENSCAFT00030039176.1 UniProtKB/TrEMBL
  ENSCAFT00040011357.1 UniProtKB/TrEMBL
  ENSCAFT00040011389.1 UniProtKB/TrEMBL
  ENSCAFT00040011434.1 UniProtKB/TrEMBL
  ENSCAFT00845014566 ENTREZGENE
  ENSCAFT00845014566.1 UniProtKB/TrEMBL
  ENSCAFT00845014633.1 UniProtKB/TrEMBL
  ENSCAFT00845014667 ENTREZGENE
  ENSCAFT00845014667.1 UniProtKB/TrEMBL
  ENSCAFT00845014710.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.100 UniProtKB/TrEMBL
  subunit c (vma5p) of the yeast v-atpase, domain 2 UniProtKB/TrEMBL
InterPro ATPase_V1-cplx_csu UniProtKB/TrEMBL
  Vac_ATP_synth_c_sf UniProtKB/TrEMBL
NCBI Gene ATP6V1C1 ENTREZGENE
PANTHER PTHR10137 UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE SUBUNIT C 1 UniProtKB/TrEMBL
Pfam V-ATPase_C UniProtKB/TrEMBL
Superfamily-SCOP SSF118203 UniProtKB/TrEMBL
UniProt A0A8C0JNI1 ENTREZGENE
  A0A8C0PB23 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Q6W5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RZ52_CANLF UniProtKB/TrEMBL
  A0A8I3N328 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N4G9_CANLF UniProtKB/TrEMBL
  A0A8I3N6D2_CANLF UniProtKB/TrEMBL
  A0A8I3NAS2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NUP7_CANLF UniProtKB/TrEMBL
  A0A8P0PE06 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:38278 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-11-21 ATP6V1C1  ATPase H+ transporting V1 subunit C1  LOC106559607  uncharacterized LOC106559607  Data merged from RGD:12154531 737654 PROVISIONAL