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Gene: DHDDS (dehydrodolichyl diphosphate synthase subunit) Canis lupus familiaris

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Symbol:

DHDDS (Ensembl: HMGN2)

Name:

dehydrodolichyl diphosphate synthase subunit (Ensembl:high mobility group nucleosomal binding domain 2)

RGD ID:

12252200

Description:

ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (inferred); nucleosomal DNA binding (inferred); prenyltransferase activity (inferred); INVOLVED IN dolichol biosynthetic process (inferred); dolichyl diphosphate biosynthetic process (inferred); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); developmental delay and seizures with or without movement abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN chromatin (inferred); dehydrodolichyl diphosphate synthase complex (inferred); endoplasmic reticulum membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

dehydrodolichyl diphosphate syntase complex subunit DHDDS; dehydrodolichyl diphosphate synthase complex subunit DHDDS

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	73,583,927 - 73,611,321 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	73,579,042 - 73,610,696 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	70,160,646 - 70,188,038 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	74,147,069 - 74,174,473 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	74,139,249 - 74,174,423 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	70,971,885 - 70,999,280 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	71,977,633 - 72,005,016 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	72,981,081 - 73,008,503 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive hypercholesterolemia (ISO)

developmental delay and seizures with or without movement abnormalities (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

retinitis pigmentosa (ISO)

retinitis pigmentosa 59 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

dolichol biosynthetic process (IEA)

dolichyl diphosphate biosynthetic process (IEA)

polyprenol biosynthetic process (IBA)

Cellular Component

chromatin (IEA)

dehydrodolichyl diphosphate synthase complex (IBA,IEA)

endoplasmic reticulum (IBA)

endoplasmic reticulum membrane (IEA)

nucleus (IEA)

Molecular Function

ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (IBA,IEA)

nucleosomal DNA binding (IEA)

prenyltransferase activity (IEA)

protein binding (ISO)

transferase activity (IEA)

transferase activity, transferring alkyl or aryl (other than methyl) groups (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

DHDDS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	73,583,927 - 73,611,321 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	73,579,042 - 73,610,696 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	70,160,646 - 70,188,038 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	74,147,069 - 74,174,473 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	74,139,249 - 74,174,423 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	70,971,885 - 70,999,280 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	71,977,633 - 72,005,016 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	72,981,081 - 73,008,503 (-)	NCBI		UU_Cfam_GSD_1.0

DHDDS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	26,432,321 - 26,471,306 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	26,432,282 - 26,471,306 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	26,758,812 - 26,797,797 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	26,631,389 - 26,670,384 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	25,156,022 - 25,195,012 (+)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	25,013,115 - 25,052,137 (+)	NCBI		HuRef
CHM1_1	1	26,871,776 - 26,910,801 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	26,270,336 - 26,309,325 (+)	NCBI		T2T-CHM13v2.0

Dhdds
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	133,696,339 - 133,728,267 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	133,696,339 - 133,728,229 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	133,969,028 - 134,000,957 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	133,969,028 - 134,000,918 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	133,524,972 - 133,556,779 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	133,241,133 - 133,272,940 (-)	NCBI		MGSCv36	mm8
Celera	4	132,146,630 - 132,178,261 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	66.47	NCBI

Dhdds
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	151,482,139 - 151,508,248 (-)	NCBI		GRCr8
mRatBN7.2	5	146,198,359 - 146,224,479 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	146,197,457 - 146,224,454 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	148,901,487 - 148,927,444 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	150,671,106 - 150,697,064 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	150,657,674 - 150,683,630 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	152,200,681 - 152,227,669 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	152,199,584 - 152,227,677 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	155,883,727 - 155,912,613 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	152,718,305 - 152,744,637 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	152,728,344 - 152,754,676 (-)	NCBI
Celera	5	144,618,491 - 144,644,445 (-)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Dhdds
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	5,811,053 - 5,845,580 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	5,811,053 - 5,844,992 (+)	NCBI	ChiLan1.0	ChiLan1.0

DHDDS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	200,397,392 - 200,436,650 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	199,498,145 - 199,537,380 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	25,696,229 - 25,735,319 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	26,760,535 - 26,799,049 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	26,760,535 - 26,799,049 (+)	Ensembl	panpan1.1		panPan2

Dhdds
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	45,088,890 - 45,124,356 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	10,913,903 - 10,950,095 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	10,914,018 - 10,949,138 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DHDDS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	83,823,229 - 83,857,092 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	83,823,262 - 83,855,101 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	77,344,573 - 77,354,066 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DHDDS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	106,294,072 - 106,336,925 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666033	10,086,956 - 10,135,320 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dhdds
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	10,443,644 - 10,476,240 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	10,443,712 - 10,476,240 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in DHDDS
163 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005617749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005617750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022412868	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038470611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038470612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038470613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038470614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038531455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038531458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038531459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038531460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038595676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038595677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038595678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038595679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038659758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038659759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038659760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038659762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_849887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	MK450420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000014006 ⟹ ENSCAFP00000030733

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,579,042 - 73,582,786 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000046729 ⟹ ENSCAFP00000041565

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,585,752 - 73,610,696 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000070741 ⟹ ENSCAFP00000047489

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,585,752 - 73,610,696 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075603 ⟹ ENSCAFP00000066687

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,599,841 - 73,610,696 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075621 ⟹ ENSCAFP00000048519

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,603,434 - 73,610,696 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000082339 ⟹ ENSCAFP00000046970

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,579,042 - 73,610,696 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000084384 ⟹ ENSCAFP00000062555

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,585,752 - 73,610,696 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845021694 ⟹ ENSCAFP00845017057

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,139,249 - 74,174,423 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845021723 ⟹ ENSCAFP00845017082

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,139,249 - 74,145,745 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845021764 ⟹ ENSCAFP00845017115

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,147,069 - 74,174,406 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845021784 ⟹ ENSCAFP00845017134

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,147,069 - 74,174,406 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845021816 ⟹ ENSCAFP00845017158

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,147,073 - 74,174,423 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845021833 ⟹ ENSCAFP00845017173

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,162,990 - 74,174,423 (-)	Ensembl

RefSeq Acc Id:

XM_005617749 ⟹ XP_005617806

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,583,927 - 73,611,321 (-)	NCBI
Dog10K_Boxer_Tasha	2	70,160,646 - 70,188,038 (-)	NCBI

Sequence:

show sequence

ATTAGGTGACGGGGGCGTGTCCCAGCGCCCAACGATGACGTGTTCTTCCAGCGCCACGTCGTGA
GGAAGTGGAGCGGTTGAAGGGCGCCTGGCGGTGCGGGGCTTGCGCCGTGTTCAAGCTGTGAGCT
AAAGGTTACCTGGCTGGTGTCTTATTGTTCTGGGATCATCTTCTGCCAGGGCAGGAGCTATGTC
ATGGATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATTATAAAGGCGGGC
CCAATGCCCAAACACATCGCTTTTATAATGGATGGAAACCGTCGCTATGCCAAGAAGTGCCAAG
TGGAGCGACAGGAAGGCCACTCGCAGGGCTTCAACAAGCTGGCTGAGACTCTGCGATGGTGTTT
GAACCTGGGCATCCTAGAGGTGACAGTCTACGCATTCAGCATTGAGAACTTCAAACGCTCCAAG
AGTGAGGTAGACGGGCTGATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAACAGG
AGAAACTGCAGAAGCACGGAGTGTGTATCCGGGTCCTAGGTGATCTACATTTGTTGCCCTTGGA
TCTCCAGGAGCTGATTGCACAAGCAGTGCGGGCCACCAAGCACTATAACAAGTGTTTCCTAAAT
GTCTGCTTTGCTTACACATCCCGTCATGAGATCAGTAATGCTGTGAGAGAGATGGCCTGGGGAG
TGGAGCAGGGCCTGCTGGATCCCAGTGATGTCTCTGAGTCTCTGCTTGATAAGTGCCTCTATAC
CAACCACTCTCCTCATCCTGACATCTTGATACGGACTTCTGGAGAAGTGAGGCTCAGCGACTTC
TTGCTCTGGCAGACTTCCCACTGCTGCTTGGTGTTCCAACCAGTTCTATGGCCAGAATACACAT
TTTGGAACCTCTGTGAGGCCATCCTGCAGTACCAGATGAACCATAGCATGCTCCAGCAGAAGGC
CCGAGACATGTATGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGACCAGGCTGCAGTGACA
GAGCAGCTGCTGCGAGAGGGGCTCCAGGCCAGTGGGGACGCCCAGCTCCGACGGACACGCTTGC
ACAAACTCTCAGCCAGACGGGAAGAGCGGGTCCAAGGCTTCCTGCAGGCCCTGGAACTCAAGCG
GGCTGACTGGCTGGCACGTCTGGGCACTGCATCAGCCTGAGGGAGGCTGGCCTCCTGCCACTTT
GCCCTGCCTCTGCCTCCAGGCCTCCACTCCCCTTTCTTTTCTTGGTGAAAGGCACCTCCCTCCT
AGTGATGAATTGTGTTTCCTTTGCTTGGCCAGGGAGCCCCAGAGGCCAGATCTGCTGGCCATAC
AGACACCTTTTGGACTGACTGGGACAGTGGACCCTGGGGAGGGTTGAGGTGAGAGTCTCCCACA
AGTACACTAAACCTGGCTCTGGCCACTGGTAGGTTCAGACAGCAGAGAGCTCCAGTTCTTGGCT
GCCTGTTCCTCCGCCTCTGCCACCTCTTCATGTGCTCCTAGATGCACTTTATTTTTTCACCAGC
ACATCTTTCAACACACAGAGTTTCAGGGCAGAGTTCTCCCCCAAAACCTTAGCCCTTTACCCAT
CCATCTTAACCTTCTACGCGACTTTTACAAAAGATTCGGCTCCACCTTGGATCTGCTGGTAAAT
AGCTCATAGGCAGCCAGCATTATTTGGGCAAGGAAGGGGAGGGAGAGACAGAAAGAAAATGTGC
CCATCTGCTGCTCCTCCCCCTGGGCTCTCCACCTGGGATTTGCTATTGAATCTCTACCCCCCCC
CCTCACCACACAGTGCTGATTGCTCACTGAAAGGCTCAGCGCCCCCAATGGCGCGCGGAAGCCA
GGCGGGTGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCT
TGCAGGGCATGGGGCCAGGCTCCACGCCCCTGTGAGACCGGCCCCCTCCATGACTACAGGGTAA
CAGAAGGGCCTGTAGGCCCTGGTGACTCTAATCCACCACAGGCCTCCCTCCCTGGCCCACATCA
CAGGACCCAGAGCACAGAAACAAGCCCTTCTCCCGACTGACTGCTGTCCTCACCATCCCAGACT
CTGCTGCCTGCCGTCTCAGCCTTTGAGGCTTCTCTGTTCTTGAGCTGGCCCCCTAAGTAGCCCC
TGAGACGATTTCTTCTCAGCGTGGCAGAGTCTCAGCTTGTTAGGGCTGACACTGCCCAGCAGGG
AGAAGAGGGCCAAGTCAAGGGCTATGTCCTTTCCCTTACCTCTCCCTGCCAGGCCTTGCTGCAG
AGCTGCTGAGAGGATTAGTGCCTTTGAAGAGCTGTCTGCCTGAGCAGCTCTGCTTCAGGTGCCG
GGAGCAGCAAGCACCAGCCTTTAACACCAGCCAAACACCACTCTGTTTAGTCTTCCCATTTTAC
TTTCTGCAAACTGTTTCCCCAGCACCTCCCTCTAGGGGAGAGGTGGGGTCTTGCAAGCAGTGGT
CACAGCAGTCTTTAAACCCCTACCTTCCTTATATTCCAGTCTCCTCTTCCCCTTCCTGTGCCAG
GTATCCTGGCACAAGAGACCCCTTGGCCATCATCCCTGCTCCCAGAATCAGGCCAAAATGCCAG
ACACTGCGATTGAAAAGCCAATCAATGCACCCTTTGGCAAGCCCCCCACACACACCTGGCATTC
CCCGCAACCAATCCCTGGCACAGGGTTCCCAGAGAGCAGGTGCTGTACATTTTCCAGCTTTACA
ATGGGGCTGTTGACAGCCTTAATTAGGGAGGCATGAATTATGCGGCTATAATGCAGAGCCCTAC
AATTAAGGCGGGAATGAGGGGCTGGAGGCAACAAACGGAATCTGCCCAGTGAGCCTGGCTATTG
AGTCCTGTCTCCGTTCTGTGTCTGACTTTCCCTAATATGACTGGGGTACAGCTGAGAAGTGATT
AATGGAGCTGGTGTCTCTCTTTGGCGTTAGGACCTGTATTTGGAGGAAGGTACACACGGGGATG
GGTAGGGGGCCAAGGGACCACTACTGCCAAGGAGCAGGAGCTGCAAACAGTTGATACGGACTCC
TCGTGATTGCTTTCTACCGGTAGGATTTGTACAAACCTACTCAACCCTTGCCTCAAGATTAAGT
AGATGGGACCTGTTTAAATGTCCTCTCACCTGTGAGCCAGTCCCTGACTTCAGGATAATTCTTG
TGTTCTTGTGTCCTCCTGGATTTCAAGTAGAATGATAAGATTCTTTCTTAGATGTAAAACTTGT
TTACAAATAGTACAACGGAACACCTTG

hide sequence

RefSeq Acc Id:

XM_005617750 ⟹ XP_005617807

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,583,927 - 73,611,318 (-)	NCBI
Dog10K_Boxer_Tasha	2	70,160,646 - 70,188,000 (-)	NCBI

Sequence:

show sequence

AGGTGACGGGGGCGTGTCCCAGCGCCCAACGATGACGTGTTCTTCCAGCGCCACGTCGTGAGGA
AGTGGAGCGGTTGAAGGGCGCCTGGCGGTGCGGGGCTTGCGCCGTGTTCAAGCTGTGAGCTAAA
GGGCAGGAGCTATGTCATGGATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAA
CATTATAAAGGCGGGCCCAATGCCCAAACACATCGCTTTTATAATGGATGGAAACCGTCGCTAT
GCCAAGAAGTGCCAAGTGGAGCGACAGGAAGGCCACTCGCAGGGCTTCAACAAGCTGGCTGAGA
CTCTGCGATGGTGTTTGAACCTGGGCATCCTAGAGGTGACAGTCTACGCATTCAGCATTGAGAA
CTTCAAACGCTCCAAGAGTGAGGTAGACGGGCTGATGGATCTGGCCCGGCAGAAGTTCAGCCGC
TTGATGGAAGAACAGGAGAAACTGCAGAAGCACGGAGTGTGTATCCGGGTCCTAGGTGATCTAC
ATTTGTTGCCCTTGGATCTCCAGGAGCTGATTGCACAAGCAGTGCGGGCCACCAAGCACTATAA
CAAGTGTTTCCTAAATGTCTGCTTTGCTTACACATCCCGTCATGAGATCAGTAATGCTGTGAGA
GAGATGGCCTGGGGAGTGGAGCAGGGCCTGCTGGATCCCAGTGATGTCTCTGAGTCTCTGCTTG
ATAAGTGCCTCTATACCAACCACTCTCCTCATCCTGACATCTTGATACGGACTTCTGGAGAAGT
GAGGCTCAGCGACTTCTTGCTCTGGCAGACTTCCCACTGCTGCTTGGTGTTCCAACCAGTTCTA
TGGCCAGAATACACATTTTGGAACCTCTGTGAGGCCATCCTGCAGTACCAGATGAACCATAGCA
TGCTCCAGCAGAAGGCCCGAGACATGTATGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGA
CCAGGCTGCAGTGACAGAGCAGCTGCTGCGAGAGGGGCTCCAGGCCAGTGGGGACGCCCAGCTC
CGACGGACACGCTTGCACAAACTCTCAGCCAGACGGGAAGAGCGGGTCCAAGGCTTCCTGCAGG
CCCTGGAACTCAAGCGGGCTGACTGGCTGGCACGTCTGGGCACTGCATCAGCCTGAGGGAGGCT
GGCCTCCTGCCACTTTGCCCTGCCTCTGCCTCCAGGCCTCCACTCCCCTTTCTTTTCTTGGTGA
AAGGCACCTCCCTCCTAGTGATGAATTGTGTTTCCTTTGCTTGGCCAGGGAGCCCCAGAGGCCA
GATCTGCTGGCCATACAGACACCTTTTGGACTGACTGGGACAGTGGACCCTGGGGAGGGTTGAG
GTGAGAGTCTCCCACAAGTACACTAAACCTGGCTCTGGCCACTGGTAGGTTCAGACAGCAGAGA
GCTCCAGTTCTTGGCTGCCTGTTCCTCCGCCTCTGCCACCTCTTCATGTGCTCCTAGATGCACT
TTATTTTTTCACCAGCACATCTTTCAACACACAGAGTTTCAGGGCAGAGTTCTCCCCCAAAACC
TTAGCCCTTTACCCATCCATCTTAACCTTCTACGCGACTTTTACAAAAGATTCGGCTCCACCTT
GGATCTGCTGGTAAATAGCTCATAGGCAGCCAGCATTATTTGGGCAAGGAAGGGGAGGGAGAGA
CAGAAAGAAAATGTGCCCATCTGCTGCTCCTCCCCCTGGGCTCTCCACCTGGGATTTGCTATTG
AATCTCTACCCCCCCCCCTCACCACACAGTGCTGATTGCTCACTGAAAGGCTCAGCGCCCCCAA
TGGCGCGCGGAAGCCAGGCGGGTGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAA
GCTTTTCTCCTCCTCTTGCAGGGCATGGGGCCAGGCTCCACGCCCCTGTGAGACCGGCCCCCTC
CATGACTACAGGGTAACAGAAGGGCCTGTAGGCCCTGGTGACTCTAATCCACCACAGGCCTCCC
TCCCTGGCCCACATCACAGGACCCAGAGCACAGAAACAAGCCCTTCTCCCGACTGACTGCTGTC
CTCACCATCCCAGACTCTGCTGCCTGCCGTCTCAGCCTTTGAGGCTTCTCTGTTCTTGAGCTGG
CCCCCTAAGTAGCCCCTGAGACGATTTCTTCTCAGCGTGGCAGAGTCTCAGCTTGTTAGGGCTG
ACACTGCCCAGCAGGGAGAAGAGGGCCAAGTCAAGGGCTATGTCCTTTCCCTTACCTCTCCCTG
CCAGGCCTTGCTGCAGAGCTGCTGAGAGGATTAGTGCCTTTGAAGAGCTGTCTGCCTGAGCAGC
TCTGCTTCAGGTGCCGGGAGCAGCAAGCACCAGCCTTTAACACCAGCCAAACACCACTCTGTTT
AGTCTTCCCATTTTACTTTCTGCAAACTGTTTCCCCAGCACCTCCCTCTAGGGGAGAGGTGGGG
TCTTGCAAGCAGTGGTCACAGCAGTCTTTAAACCCCTACCTTCCTTATATTCCAGTCTCCTCTT
CCCCTTCCTGTGCCAGGTATCCTGGCACAAGAGACCCCTTGGCCATCATCCCTGCTCCCAGAAT
CAGGCCAAAATGCCAGACACTGCGATTGAAAAGCCAATCAATGCACCCTTTGGCAAGCCCCCCA
CACACACCTGGCATTCCCCGCAACCAATCCCTGGCACAGGGTTCCCAGAGAGCAGGTGCTGTAC
ATTTTCCAGCTTTACAATGGGGCTGTTGACAGCCTTAATTAGGGAGGCATGAATTATGCGGCTA
TAATGCAGAGCCCTACAATTAAGGCGGGAATGAGGGGCTGGAGGCAACAAACGGAATCTGCCCA
GTGAGCCTGGCTATTGAGTCCTGTCTCCGTTCTGTGTCTGACTTTCCCTAATATGACTGGGGTA
CAGCTGAGAAGTGATTAATGGAGCTGGTGTCTCTCTTTGGCGTTAGGACCTGTATTTGGAGGAA
GGTACACACGGGGATGGGTAGGGGGCCAAGGGACCACTACTGCCAAGGAGCAGGAGCTGCAAAC
AGTTGATACGGACTCCTCGTGATTGCTTTCTACCGGTAGGATTTGTACAAACCTACTCAACCCT
TGCCTCAAGATTAAGTAGATGGGACCTGTTTAAATGTCCTCTCACCTGTGAGCCAGTCCCTGAC
TTCAGGATAATTCTTGTGTTCTTGTGTCCTCCTGGATTTCAAGTAGAATGATAAGATTCTTTCT
TAGATGTAAAACTTGTTTACAAATAGTACAACGGAACACCTTG

hide sequence

RefSeq Acc Id:

XM_022412868 ⟹ XP_022268576

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,592,152 - 73,611,321 (-)	NCBI
Dog10K_Boxer_Tasha	2	70,169,210 - 70,188,038 (-)	NCBI

Sequence:

show sequence

ATTAGGTGACGGGGGCGTGTCCCAGCGCCCAACGATGACGTGTTCTTCCAGCGCCACGTCGTGA
GGAAGTGGAGCGGTTGAAGGGCGCCTGGCGGTGCGGGGCTTGCGCCGTGTTCAAGCTGTGAGCT
AAAGGTTACCTGGCTGGTGTCTTATTGTTCTGGGATCATCTTCTGCCAGGGCAGGAGCTATGTC
ATGGATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATTATAAAGGCGGGC
CCAATGCCCAAACACATCGCTTTTATAATGGATGGAAACCGTCGCTATGCCAAGAAGTGCCAAG
TGGAGCGACAGGAAGGCCACTCGCAGGGCTTCAACAAGCTGGCTGAGACTCTGCGATGGTGTTT
GAACCTGGGCATCCTAGAGGTGACAGTCTACGCATTCAGCATTGAGAACTTCAAACGCTCCAAG
AGTGAGGTAGACGGGCTGATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAACAGG
AGAAACTGCAGAAGCACGGAGTGTGTATCCGGGTCCTAGGTGATCTACATTTGTTGCCCTTGGA
TCTCCAGGAGCTGATTGCACAAGCAGTGCGGGCCACCAAGCACTATAACAAGTGTTTCCTAAAT
GTCTGCTTTGCTTACACATCCCGTCATGAGATCAGTAATGCTGTGAGAGAGATGGCCTGGGGAG
TGGAGCAGGGCCTGCTGGATCCCAGTGATGTCTCTGAGTCTCTGCTTGATAAGTGCCTCTATAC
CAACCACTCTCCTCATCCTGACATCTTGATACGGACTTCTGGAGAAGTGAGGCTCAGCGACTTC
TTGCTCTGGCAGACTTCCCACTGCTGCTTGGTGTTCCAACCAGTTCTATGGCCAGAATACACAT
TTTGGAACCTCTGTGAGGCCATCCTGCAGTACCAGATGAACCATAGCATGCTCCAGGTTTGGTG
TCTTCATTTTCCAAATTTGGAAACAGAGGAGCAGAGTAACCTGTCTCAAGGCCACAGAATTTTA
AAGCCAAAGCTGGTGCTGTTCCTTGAGTCTAGAAAGATAATGGCCAGAAGGAAATAATGATTTA
AGTCAGGGCTTCTTAATCCCTTGGAGAATCTGGTAAAAAAACATAGACCATTTCCCTAGAAAAA
TTGCACAGATCATTCTAACATATGGCATTTCACATAGAATTATACTCATCACTGAAACACTTAT
ATTGCTACCAGGGGCTCAAAGAACTCCTGGAATTTGTCGATGAATCCCAAGTCCAGAACTCCTG
GAATAAGTCAATCAAATCATGTGCTTGGTTACTAGAATATAAGGAATTGAAAAAGGAAGTTCTG
TTAACGTGAAAGGAAAAATAGCAGAGTCTCAGTTATCCACCATCAGTGAAAAATGAATATCAGA
TATTTCCATATGACCAAAGCTCTCTTAAG

hide sequence

RefSeq Acc Id:

XM_038470611 ⟹ XP_038326539

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	70,971,885 - 70,999,280 (-)	NCBI

RefSeq Acc Id:

XM_038470612 ⟹ XP_038326540

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	70,971,885 - 70,999,242 (-)	NCBI

RefSeq Acc Id:

XM_038470613 ⟹ XP_038326541

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	70,971,885 - 70,999,280 (-)	NCBI

RefSeq Acc Id:

XM_038470614 ⟹ XP_038326542

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	70,980,449 - 70,999,280 (-)	NCBI

RefSeq Acc Id:

XM_038531455 ⟹ XP_038387383

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	72,981,081 - 73,008,503 (-)	NCBI

RefSeq Acc Id:

XM_038531458 ⟹ XP_038387386

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	72,981,081 - 73,008,464 (-)	NCBI

RefSeq Acc Id:

XM_038531459 ⟹ XP_038387387

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	72,981,081 - 73,008,503 (-)	NCBI

RefSeq Acc Id:

XM_038531460 ⟹ XP_038387388

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	72,989,650 - 73,008,503 (-)	NCBI

RefSeq Acc Id:

XM_038595676 ⟹ XP_038451604

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	71,977,633 - 72,005,016 (-)	NCBI

RefSeq Acc Id:

XM_038595677 ⟹ XP_038451605

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	71,977,633 - 72,004,977 (-)	NCBI

RefSeq Acc Id:

XM_038595678 ⟹ XP_038451606

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	71,977,633 - 72,005,016 (-)	NCBI

RefSeq Acc Id:

XM_038595679 ⟹ XP_038451607

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	71,986,198 - 72,005,016 (-)	NCBI

RefSeq Acc Id:

XM_038659758 ⟹ XP_038515686

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	74,147,069 - 74,174,473 (-)	NCBI

RefSeq Acc Id:

XM_038659759 ⟹ XP_038515687

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	74,147,069 - 74,174,434 (-)	NCBI

RefSeq Acc Id:

XM_038659760 ⟹ XP_038515688

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	74,147,069 - 74,174,473 (-)	NCBI

RefSeq Acc Id:

XM_038659762 ⟹ XP_038515690

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	74,155,634 - 74,174,473 (-)	NCBI

RefSeq Acc Id:

XM_849887 ⟹ XP_854980

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,583,927 - 73,611,321 (-)	NCBI
Dog10K_Boxer_Tasha	2	70,160,646 - 70,188,038 (-)	NCBI

Sequence:

show sequence

ATTAGGTGACGGGGGCGTGTCCCAGCGCCCAACGATGACGTGTTCTTCCAGCGCCACGTCGTGA
GGAAGTGGAGCGGTTGAAGGGCGCCTGGCGGTGCGGGGCTTGCGCCGTGTTCAAGCTGTGAGCT
AAAGGTTACCTGGCTGGTGTCTTATTGTTCTGGGATCATCTTCTGCCAGGGCAGGAGCTATGTC
ATGGATCAAGGAAGGAGAGCTGTCACTTTGGGAGCGGTTCTGTGCCAACATTATAAAGGCGGGC
CCAATGCCCAAACACATCGCTTTTATAATGGATGGAAACCGTCGCTATGCCAAGAAGTGCCAAG
TGGAGCGACAGGAAGGCCACTCGCAGGGCTTCAACAAGCTGGCTGAGACTCTGCGATGGTGTTT
GAACCTGGGCATCCTAGAGGTGACAGTCTACGCATTCAGCATTGAGAACTTCAAACGCTCCAAG
AGTGAGGTAGACGGGCTGATGGATCTGGCCCGGCAGAAGTTCAGCCGCTTGATGGAAGAACAGG
AGAAACTGCAGAAGCACGGAGTGTGTATCCGGGTCCTAGGTGATCTACATTTGTTGCCCTTGGA
TCTCCAGGAGCTGATTGCACAAGCAGTGCGGGCCACCAAGCACTATAACAAGTGTTTCCTAAAT
GTCTGCTTTGCTTACACATCCCGTCATGAGATCAGTAATGCTGTGAGAGAGATGGCCTGGGGAG
TGGAGCAGGGCCTGCTGGATCCCAGTGATGTCTCTGAGTCTCTGCTTGATAAGTGCCTCTATAC
CAACCACTCTCCTCATCCTGACATCTTGATACGGACTTCTGGAGAAGTGAGGCTCAGCGACTTC
TTGCTCTGGCAGACTTCCCACTGCTGCTTGGTGTTCCAACCAGTTCTATGGCCAGAATACACAT
TTTGGAACCTCTGTGAGGCCATCCTGCAGTACCAGATGAACCATAGCATGCTCCAGAAGGCCCG
AGACATGTATGCAGAGGAGCGGAAGAGGCAGCAGCTGGAGAGGGACCAGGCTGCAGTGACAGAG
CAGCTGCTGCGAGAGGGGCTCCAGGCCAGTGGGGACGCCCAGCTCCGACGGACACGCTTGCACA
AACTCTCAGCCAGACGGGAAGAGCGGGTCCAAGGCTTCCTGCAGGCCCTGGAACTCAAGCGGGC
TGACTGGCTGGCACGTCTGGGCACTGCATCAGCCTGAGGGAGGCTGGCCTCCTGCCACTTTGCC
CTGCCTCTGCCTCCAGGCCTCCACTCCCCTTTCTTTTCTTGGTGAAAGGCACCTCCCTCCTAGT
GATGAATTGTGTTTCCTTTGCTTGGCCAGGGAGCCCCAGAGGCCAGATCTGCTGGCCATACAGA
CACCTTTTGGACTGACTGGGACAGTGGACCCTGGGGAGGGTTGAGGTGAGAGTCTCCCACAAGT
ACACTAAACCTGGCTCTGGCCACTGGTAGGTTCAGACAGCAGAGAGCTCCAGTTCTTGGCTGCC
TGTTCCTCCGCCTCTGCCACCTCTTCATGTGCTCCTAGATGCACTTTATTTTTTCACCAGCACA
TCTTTCAACACACAGAGTTTCAGGGCAGAGTTCTCCCCCAAAACCTTAGCCCTTTACCCATCCA
TCTTAACCTTCTACGCGACTTTTACAAAAGATTCGGCTCCACCTTGGATCTGCTGGTAAATAGC
TCATAGGCAGCCAGCATTATTTGGGCAAGGAAGGGGAGGGAGAGACAGAAAGAAAATGTGCCCA
TCTGCTGCTCCTCCCCCTGGGCTCTCCACCTGGGATTTGCTATTGAATCTCTACCCCCCCCCCT
CACCACACAGTGCTGATTGCTCACTGAAAGGCTCAGCGCCCCCAATGGCGCGCGGAAGCCAGGC
GGGTGATTACAATCCAATTACCTATTGTCGACTCAGCCCACACAAGCTTTTCTCCTCCTCTTGC
AGGGCATGGGGCCAGGCTCCACGCCCCTGTGAGACCGGCCCCCTCCATGACTACAGGGTAACAG
AAGGGCCTGTAGGCCCTGGTGACTCTAATCCACCACAGGCCTCCCTCCCTGGCCCACATCACAG
GACCCAGAGCACAGAAACAAGCCCTTCTCCCGACTGACTGCTGTCCTCACCATCCCAGACTCTG
CTGCCTGCCGTCTCAGCCTTTGAGGCTTCTCTGTTCTTGAGCTGGCCCCCTAAGTAGCCCCTGA
GACGATTTCTTCTCAGCGTGGCAGAGTCTCAGCTTGTTAGGGCTGACACTGCCCAGCAGGGAGA
AGAGGGCCAAGTCAAGGGCTATGTCCTTTCCCTTACCTCTCCCTGCCAGGCCTTGCTGCAGAGC
TGCTGAGAGGATTAGTGCCTTTGAAGAGCTGTCTGCCTGAGCAGCTCTGCTTCAGGTGCCGGGA
GCAGCAAGCACCAGCCTTTAACACCAGCCAAACACCACTCTGTTTAGTCTTCCCATTTTACTTT
CTGCAAACTGTTTCCCCAGCACCTCCCTCTAGGGGAGAGGTGGGGTCTTGCAAGCAGTGGTCAC
AGCAGTCTTTAAACCCCTACCTTCCTTATATTCCAGTCTCCTCTTCCCCTTCCTGTGCCAGGTA
TCCTGGCACAAGAGACCCCTTGGCCATCATCCCTGCTCCCAGAATCAGGCCAAAATGCCAGACA
CTGCGATTGAAAAGCCAATCAATGCACCCTTTGGCAAGCCCCCCACACACACCTGGCATTCCCC
GCAACCAATCCCTGGCACAGGGTTCCCAGAGAGCAGGTGCTGTACATTTTCCAGCTTTACAATG
GGGCTGTTGACAGCCTTAATTAGGGAGGCATGAATTATGCGGCTATAATGCAGAGCCCTACAAT
TAAGGCGGGAATGAGGGGCTGGAGGCAACAAACGGAATCTGCCCAGTGAGCCTGGCTATTGAGT
CCTGTCTCCGTTCTGTGTCTGACTTTCCCTAATATGACTGGGGTACAGCTGAGAAGTGATTAAT
GGAGCTGGTGTCTCTCTTTGGCGTTAGGACCTGTATTTGGAGGAAGGTACACACGGGGATGGGT
AGGGGGCCAAGGGACCACTACTGCCAAGGAGCAGGAGCTGCAAACAGTTGATACGGACTCCTCG
TGATTGCTTTCTACCGGTAGGATTTGTACAAACCTACTCAACCCTTGCCTCAAGATTAAGTAGA
TGGGACCTGTTTAAATGTCCTCTCACCTGTGAGCCAGTCCCTGACTTCAGGATAATTCTTGTGT
TCTTGTGTCCTCCTGGATTTCAAGTAGAATGATAAGATTCTTTCTTAGATGTAAAACTTGTTTA
CAAATAGTACAACGGAACACCTTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005617806	(Get FASTA)	NCBI Sequence Viewer
	XP_005617807	(Get FASTA)	NCBI Sequence Viewer
	XP_022268576	(Get FASTA)	NCBI Sequence Viewer
	XP_038326539	(Get FASTA)	NCBI Sequence Viewer
	XP_038326540	(Get FASTA)	NCBI Sequence Viewer
	XP_038326541	(Get FASTA)	NCBI Sequence Viewer
	XP_038326542	(Get FASTA)	NCBI Sequence Viewer
	XP_038387383	(Get FASTA)	NCBI Sequence Viewer
	XP_038387386	(Get FASTA)	NCBI Sequence Viewer
	XP_038387387	(Get FASTA)	NCBI Sequence Viewer
	XP_038387388	(Get FASTA)	NCBI Sequence Viewer
	XP_038451604	(Get FASTA)	NCBI Sequence Viewer
	XP_038451605	(Get FASTA)	NCBI Sequence Viewer
	XP_038451606	(Get FASTA)	NCBI Sequence Viewer
	XP_038451607	(Get FASTA)	NCBI Sequence Viewer
	XP_038515686	(Get FASTA)	NCBI Sequence Viewer
	XP_038515687	(Get FASTA)	NCBI Sequence Viewer
	XP_038515688	(Get FASTA)	NCBI Sequence Viewer
	XP_038515690	(Get FASTA)	NCBI Sequence Viewer
	XP_854980	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000041565.2
	ENSCAFP00000046970.1
	ENSCAFP00000047489.1
	ENSCAFP00000062555.1
	ENSCAFP00000066687.1
	ENSCAFP00000072037.1
	ENSCAFP00030023173.1
	ENSCAFP00030023230.1
	ENSCAFP00030023248.1
	ENSCAFP00030023260.1
	ENSCAFP00040006620.1
	ENSCAFP00040006660.1
	ENSCAFP00040006674.1
	ENSCAFP00040006685.1
	ENSCAFP00040006688.1
	ENSCAFP00845017057.1
	ENSCAFP00845017082.1
	ENSCAFP00845017115
	ENSCAFP00845017115.1
	ENSCAFP00845017134.1
	ENSCAFP00845017158
	ENSCAFP00845017158.1
	ENSCAFP00845017173.1
GenBank Protein	QGH83523	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_854980 ⟸ XM_849887
- Peptide Label:	isoform X2
- UniProtKB:	J9P7C8 (UniProtKB/TrEMBL), A0A8C0RXB9 (UniProtKB/TrEMBL), A0A8C0LB55 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRW CLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLP LDLQELIAQAVRATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCL YTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNLCEAILQYQMNHSMLQK ARDMYAEERKRQQLERDQAAVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELK RADWLARLGTASA hide sequence

RefSeq Acc Id:	XP_005617806 ⟸ XM_005617749
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3NLY1 (UniProtKB/TrEMBL), A0A8P0SV96 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRW CLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLP LDLQELIAQAVRATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCL YTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNLCEAILQYQMNHSMLQQ KARDMYAEERKRQQLERDQAAVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALEL KRADWLARLGTASA hide sequence

RefSeq Acc Id:	XP_005617807 ⟸ XM_005617750
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3NLY1 (UniProtKB/TrEMBL), A0A8P0SV96 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRW CLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLP LDLQELIAQAVRATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCL YTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNLCEAILQYQMNHSMLQQ KARDMYAEERKRQQLERDQAAVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALEL KRADWLARLGTASA hide sequence

RefSeq Acc Id:

XP_022268576 ⟸ XM_022412868

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSWIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRW
CLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEQEKLQKHGVCIRVLGDLHLLP
LDLQELIAQAVRATKHYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDVSESLLDKCL
YTNHSPHPDILIRTSGEVRLSDFLLWQTSHCCLVFQPVLWPEYTFWNLCEAILQYQMNHSMLQV
WCLHFPNLETEEQSNLSQGHRILKPKLVLFLESRKIMARRK

hide sequence

Ensembl Acc Id:

ENSCAFP00000062555 ⟸ ENSCAFT00000084384

Ensembl Acc Id:

ENSCAFP00000047489 ⟸ ENSCAFT00000070741

Ensembl Acc Id:

ENSCAFP00000030733 ⟸ ENSCAFT00000014006

Ensembl Acc Id:

ENSCAFP00000046970 ⟸ ENSCAFT00000082339

Ensembl Acc Id:

ENSCAFP00000048519 ⟸ ENSCAFT00000075621

Ensembl Acc Id:

ENSCAFP00000066687 ⟸ ENSCAFT00000075603

Ensembl Acc Id:

ENSCAFP00000041565 ⟸ ENSCAFT00000046729

RefSeq Acc Id:	XP_038326541 ⟸ XM_038470613
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038326539 ⟸ XM_038470611
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038326540 ⟸ XM_038470612
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038326542 ⟸ XM_038470614
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038451606 ⟸ XM_038595678
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038451604 ⟸ XM_038595676
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038451605 ⟸ XM_038595677
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038451607 ⟸ XM_038595679
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038515688 ⟸ XM_038659760
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RXB9 (UniProtKB/TrEMBL), J9P7C8 (UniProtKB/TrEMBL), A0A8C0LB55 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038515686 ⟸ XM_038659758
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3NLY1 (UniProtKB/TrEMBL), A0A8P0SV96 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038515687 ⟸ XM_038659759
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3NLY1 (UniProtKB/TrEMBL), A0A8P0SV96 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038515690 ⟸ XM_038659762
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038387387 ⟸ XM_038531459
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LB55 (UniProtKB/TrEMBL), A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8C0RXB9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL), J9P7C8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038387383 ⟸ XM_038531455
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL), A0A8I3NLY1 (UniProtKB/TrEMBL), A0A8P0SV96 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038387386 ⟸ XM_038531458
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N949 (UniProtKB/TrEMBL), A0A8C0R5A9 (UniProtKB/TrEMBL), A0A8I3NLV6 (UniProtKB/TrEMBL), A0A8I3NLY1 (UniProtKB/TrEMBL), A0A8P0SV96 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038387388 ⟸ XM_038531460
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSCAFP00845017134 ⟸ ENSCAFT00845021784

Ensembl Acc Id:

ENSCAFP00845017158 ⟸ ENSCAFT00845021816

Ensembl Acc Id:

ENSCAFP00845017115 ⟸ ENSCAFT00845021764

Ensembl Acc Id:

ENSCAFP00845017057 ⟸ ENSCAFT00845021694

Ensembl Acc Id:

ENSCAFP00845017173 ⟸ ENSCAFT00845021833

Ensembl Acc Id:

ENSCAFP00845017082 ⟸ ENSCAFT00845021723

Promoters

RGD ID:

13682590

Promoter ID:

EPDNEW_C657

Type:

multiple initiation site

Name:

DHDDS_1

Description:

dehydrodolichyl diphosphate synthase subunit

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,611,261 - 73,611,321	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000028705	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030014201	UniProtKB/TrEMBL
	ENSCAFG00040003963	UniProtKB/TrEMBL
	ENSCAFG00845012085	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000046729.3	UniProtKB/TrEMBL
	ENSCAFT00000070741.2	UniProtKB/TrEMBL
	ENSCAFT00000075603.2	UniProtKB/TrEMBL
	ENSCAFT00000082339.2	UniProtKB/TrEMBL
	ENSCAFT00000084384.2	UniProtKB/TrEMBL
	ENSCAFT00000100303.1	UniProtKB/TrEMBL
	ENSCAFT00030026549.1	UniProtKB/TrEMBL
	ENSCAFT00030026613.1	UniProtKB/TrEMBL
	ENSCAFT00030026631.1	UniProtKB/TrEMBL
	ENSCAFT00030026648.1	UniProtKB/TrEMBL
	ENSCAFT00040007591.1	UniProtKB/TrEMBL
	ENSCAFT00040007631.1	UniProtKB/TrEMBL
	ENSCAFT00040007645.1	UniProtKB/TrEMBL
	ENSCAFT00040007656.1	UniProtKB/TrEMBL
	ENSCAFT00040007661.1	UniProtKB/TrEMBL
	ENSCAFT00845021694.1	UniProtKB/TrEMBL
	ENSCAFT00845021723.1	UniProtKB/TrEMBL
	ENSCAFT00845021764	ENTREZGENE
	ENSCAFT00845021764.1	UniProtKB/TrEMBL
	ENSCAFT00845021784.1	UniProtKB/TrEMBL
	ENSCAFT00845021816	ENTREZGENE
	ENSCAFT00845021816.1	UniProtKB/TrEMBL
	ENSCAFT00845021833.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.1180.10	UniProtKB/TrEMBL
InterPro	HMGN_fam	UniProtKB/TrEMBL
	UPP_synth-like	UniProtKB/TrEMBL
	UPP_synth-like_CS	UniProtKB/TrEMBL
	UPP_synth-like_sf	UniProtKB/TrEMBL
KEGG Report	cfa:612157	UniProtKB/TrEMBL
NCBI Gene	DHDDS	ENTREZGENE
PANTHER	DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDS	UniProtKB/TrEMBL
	NON-HISTONE CHROMOSOMAL PROTEIN HMG-17	UniProtKB/TrEMBL
	NONHISTONE CHROMOSOMAL PROTEIN HMG	UniProtKB/TrEMBL
	PTHR10291	UniProtKB/TrEMBL
Pfam	HMG14_17	UniProtKB/TrEMBL
	Prenyltransf	UniProtKB/TrEMBL
PRINTS	NONHISHMG17	UniProtKB/TrEMBL
PROSITE	HMG14_17	UniProtKB/TrEMBL
	UPP_SYNTHASE	UniProtKB/TrEMBL
SMART	HMG17	UniProtKB/TrEMBL
Superfamily-SCOP	SSF64005	UniProtKB/TrEMBL
UniProt	A0A8C0LB55	ENTREZGENE
	A0A8C0N949	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0N959_CANLF	UniProtKB/TrEMBL
	A0A8C0Q6X9_CANLF	UniProtKB/TrEMBL
	A0A8C0R5A9	ENTREZGENE
	A0A8C0RXB9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RXK9_CANLF	UniProtKB/TrEMBL
	A0A8I3NKG7_CANLF	UniProtKB/TrEMBL
	A0A8I3NKI7_CANLF	UniProtKB/TrEMBL
	A0A8I3NLV6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NLY1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NX41_CANLF	UniProtKB/TrEMBL
	A0A8I3RZ96_CANLF	UniProtKB/TrEMBL
	A0A8P0SV96	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0TQ98_CANLF	UniProtKB/TrEMBL
	J9P7C8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:39928	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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