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Gene: ATP6V1B2 (ATPase H+ transporting V1 subunit B2) Canis lupus familiaris

Analyze

Symbol:

ATP6V1B2

Name:

ATPase H+ transporting V1 subunit B2

RGD ID:

12187469

Description:

ENCODES a protein that exhibits ATP binding (inferred); proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN ATP metabolic process (inferred); monoatomic ion transport (inferred); proton transmembrane transport (inferred); ASSOCIATED WITH autosomal dominant congenital deafness with onychodystrophy (ortholog); epilepsy (ortholog); follicular lymphoma (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

V-type proton ATPase subunit B, brain isoform

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	36,833,246 - 36,858,846 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	36,834,196 - 36,858,819 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	37,427,758 - 37,453,358 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	37,060,323 - 37,085,593 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	37,058,861 - 37,085,557 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	36,996,082 - 37,021,279 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	36,844,258 - 36,869,790 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	37,013,339 - 37,038,613 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant congenital deafness with onychodystrophy (ISO)

epilepsy (ISO)

follicular lymphoma (ISO)

genetic disease (ISO)

hereditary spastic paraplegia 53 (ISO)

osteoarthritis (ISO)

Zimmerman Laband Syndrome (ISO)

Zimmermann-Laband Syndrome 1 (ISO)

Zimmermann-Laband Syndrome 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ATP metabolic process (IEA)

monoatomic ion transport (IEA)

proton transmembrane transport (IEA)

synaptic vesicle lumen acidification (IEA)

vacuolar acidification (IBA)

Cellular Component

apical plasma membrane (IEA)

clathrin-coated vesicle (IEA)

clathrin-coated vesicle membrane (IEA)

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

cytosol (IEA)

extrinsic component of synaptic vesicle membrane (ISO)

intracellular membrane-bounded organelle (IEA)

melanosome (IEA)

microvillus (IEA)

plasma membrane (IEA)

proton-transporting V-type ATPase, V1 domain (IEA)

ruffle (IEA)

synapse (IEA)

synaptic vesicle membrane (IEA)

vacuolar proton-transporting V-type ATPase, V1 domain (IEA)

Molecular Function

ATP binding (IEA)

protein binding (ISO)

proton-transporting ATPase activity, rotational mechanism (IBA,IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

ATP6V1B2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	36,833,246 - 36,858,846 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	36,834,196 - 36,858,819 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	37,427,758 - 37,453,358 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	37,060,323 - 37,085,593 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	37,058,861 - 37,085,557 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	36,996,082 - 37,021,279 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	36,844,258 - 36,869,790 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	37,013,339 - 37,038,613 (-)	NCBI		UU_Cfam_GSD_1.0

ATP6V1B2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	20,197,381 - 20,221,696 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	20,197,381 - 20,230,399 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	20,054,892 - 20,079,207 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	20,098,984 - 20,123,487 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	20,098,983 - 20,123,485	NCBI
Celera	8	19,017,312 - 19,041,815 (+)	NCBI		Celera
Cytogenetic Map	8	p21.3	NCBI
HuRef	8	18,594,885 - 18,619,391 (+)	NCBI		HuRef
CHM1_1	8	20,256,468 - 20,280,970 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	20,462,474 - 20,486,792 (+)	NCBI		T2T-CHM13v2.0

Atp6v1b2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	69,541,388 - 69,566,370 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	69,541,298 - 69,566,363 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	69,088,736 - 69,113,718 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	69,088,646 - 69,113,711 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	71,612,635 - 71,637,617 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	72,017,774 - 72,042,696 (+)	NCBI		MGSCv36	mm8
Celera	8	71,638,588 - 71,664,008 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	33.88	NCBI

Atp6v1b2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	25,384,254 - 25,408,388 (-)	NCBI		GRCr8
mRatBN7.2	16	20,617,515 - 20,641,651 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	20,617,518 - 20,641,745 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	23,985,269 - 24,010,794 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	27,416,771 - 27,440,870 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	23,350,578 - 23,376,103 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	22,326,537 - 22,350,143 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	22,326,529 - 22,350,155 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	22,221,011 - 22,244,664 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	22,320,425 - 22,344,445 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	22,320,425 - 22,344,443 (-)	NCBI
Celera	16	20,593,372 - 20,617,306 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Atp6v1b2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	43,860,728 - 43,886,732 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	43,860,811 - 43,886,398 (+)	NCBI	ChiLan1.0	ChiLan1.0

ATP6V1B2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	38,678,698 - 38,703,121 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	14,404,285 - 14,428,721 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	19,422,423 - 19,446,799 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	16,369,937 - 16,394,284 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	16,369,937 - 16,394,284 (+)	Ensembl	panpan1.1		panPan2

Atp6v1b2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	14,261,909 - 14,285,067 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	4,285,269 - 4,310,858 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	4,285,269 - 4,307,715 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ATP6V1B2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	4,289,339 - 4,318,584 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	4,289,257 - 4,318,587 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	4,718,964 - 4,748,253 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ATP6V1B2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	18,264,210 - 18,289,951 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	18,264,329 - 18,293,444 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666052	23,963,087 - 23,988,457 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Atp6v1b2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	15,910,132 - 15,935,160 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	15,910,189 - 15,933,975 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ATP6V1B2
301 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038435524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038510469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038638234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_543263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000016053 ⟹ ENSCAFP00000014848

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	25	36,834,196 - 36,858,819 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845051491 ⟹ ENSCAFP00845040403

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	25	37,058,861 - 37,085,557 (-)	Ensembl

RefSeq Acc Id:

XM_038435524 ⟹ XP_038291452

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	25	37,060,323 - 37,085,593 (-)	NCBI

RefSeq Acc Id:

XM_038510469 ⟹ XP_038366397

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	25	36,996,082 - 37,021,279 (-)	NCBI

RefSeq Acc Id:

XM_038573923 ⟹ XP_038429851

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	25	37,013,339 - 37,038,613 (-)	NCBI

RefSeq Acc Id:

XM_038638234 ⟹ XP_038494162

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	25	36,844,258 - 36,869,790 (-)	NCBI

RefSeq Acc Id:

XM_543263 ⟹ XP_543263

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	36,833,246 - 36,858,846 (-)	NCBI
Dog10K_Boxer_Tasha	25	37,427,758 - 37,453,358 (-)	NCBI

Sequence:

show sequence

TGCGCGGCGCGGCTGCGGGGCCAGTCGGGACGGAGGAGACAAGATGGCGCTGCGGGCGATGCGG
GGGATCGTGAACGGGGCCGCACCCGAGCTGCCCGTGCCCACCAGTGGGCCGGTTGCGGGATCTC
GGGAGCAAGCGCTGGCGGTTAGCCGGAACTACCTTTCCCAGCCTCGCCTCACATACAAGACAGT
ATCAGGAGTCAATGGTCCACTAGTGATCTTAGATCATGTTAAGTTTCCCAGATATGCTGAGATT
GTCCACTTGACATTACCAGATGGCACAAAGAGAAGTGGGCAAGTTCTAGAAGTTAGTGGTTCCA
AAGCAGTGGTTCAGGTATTTGAGGGAACATCAGGTATAGATGCCAAGAAAACGTCCTGTGAGTT
TACTGGGGATATTCTTCGAACACCAGTGTCTGAGGATATGCTTGGTCGGGTCTTCAATGGATCA
GGAAAACCCATCGATAGAGGTCCTGTTGTACTGGCTGAAGACTTCCTTGACATCATGGGCCAGC
CAATCAATCCTCAGTGTCGAATCTACCCAGAGGAGATGATTCAGACTGGCATTTCAGCCATAGA
TGGCATGAACAGTATTGCTCGGGGGCAGAAAATTCCAATCTTCTCTGCTGCTGGCTTACCACAC
AATGAGATTGCAGCTCAGATCTGTCGCCAGGCTGGTTTGGTAAAGAAATCCAAAGATGTGGTGG
ACTACAGTGAGGAAAATTTTGCAATTGTATTTGCTGCTATGGGTGTAAACATGGAAACTGCCCG
GTTCTTCAAATCTGACTTTGAAGAAAATGGCTCAATGGACAATGTCTGCCTCTTTTTGAACTTG
GCTAATGACCCAACTATTGAGCGAATTATCACTCCTCGCTTGGCTCTAACTACAGCTGAATTTC
TGGCCTATCAATGTGAGAAACATGTATTGGTTATCCTAACAGATATGAGTTCTTATGCAGAAGC
ACTTCGAGAGGTTTCAGCAGCCAGGGAAGAGGTTCCTGGTCGACGAGGTTTCCCAGGTTACATG
TATACAGATTTATCTACAATATATGAACGCGCTGGTCGAGTAGAAGGTAGAAATGGTTCCATTA
CTCAAATCCCTATTCTCACCATGCCAAATGATGATATCACTCACCCCATCCCTGACCTGACTGG
ATATATTACCGAGGGGCAGATCTACGTGGACAGGCAACTACACAACAGACAGATTTACCCACCT
ATTAATGTGCTGCCCTCGTTATCACGGTTAATGAAATCTGCTATTGGAGAAGGTATGACCAGAA
AGGATCATGCCGATGTATCTAACCAGCTGTATGCTTGTTATGCTATTGGTAAGGATGTACAAGC
CATGAAAGCCGTAGTTGGAGAAGAAGCCCTTACCTCAGATGATCTTCTTTACTTGGAATTTTTG
CAGAAGTTTGAGCGGAACTTCATTGCTCAGGGTCCTTATGAAAACCGCACTGTCTATGAGACTT
TGGACATTGGCTGGCAACTACTCCGAATCTTCCCCAAAGAAATGCTGAAGAGGATCCCTCAGAG
CACGCTGAGTGAATTTTACCCTCGAGACTCTGCAAAGCATTAGCTGCTACTTCATCGCTGGCTC
GATACACTTGTGAAATACTGGTTCTGTTTTCTTTATTCCTTTTGCACTCCCCATCCCCCCATCT
TTGTGTTGGAGTTTACCTTGTTACCCTGTAATTAAAAACAAAGAATAGGTAACATATTGTGCCA
GTGTTGCAATGTTTTAAACTTCTAACAGACTTTAAAATATCCCCTGTTCAGAAAACCTGGATCA
TCAGTGCTTTTTTAAAAGTAGCTGCAGGGATGGAGGTACAATTTTCCTATGGATGTGTGTGTTT
GTACATAGTGTTGTAGTTAGTTGCCTAATAATGTCTTCATTATATGGTCTCCTCGACCTTACCT
CTCAGCCCCCTCAAGAGTTATCATTGTCTGAAGTTATAATGCTTTGATCTCCAAGTTAGAGCTA
GGATCAGGTCTGAAAGAAGCCTCCTCTCTGTAGAGCCAAGACCTCTTCCCTGAGCATTTGAGTT
TTGGATTGTTGCTGTGCCCATAGGTCTGTGCTGCTGCTCTAAGCAGATGGTTTTTACTGTCCAC
CTGCTCTTTCCTATTTAATGACTAGATTAGAAAAGGAGTTTCCTTTTTCTCTTTAGTCCTTATG
AGTTGGGACTCCTGTGTCTTACTGTTCTCCCTCCTTCTGAGTAACACAGAATCCTGCAGCTTTT
GCACAGCTGGCATTGATCTGATAGTAGTGAGATGCCTTGTCTTAATGATCCGTACTGTGTTTCC
CTGCAGAGGAATCATAATTAAAATAACTAATAGAACTTGCTTCGAAAGAGTTGGGGTACAATAA
AAGAAGAAAGAAAAACCCATATGCATTCTACATTCTGACATGTTAAGAGTGGTTTAAGTTTCTA
AAGTGTTTACCAGATGCTGAGGGCAAGGTGGGGAGGAGAAAGCTCTTCTGTGAATGGATATTTT
AAACTCTGTTAGCAGTCTTTGGAAGATCCCCTATTTGGTCCTGTTTTCTGACCCATCTCTACCT
TTTCAGGGTAATCTTTGTGGCACAAGTGATAGCATTTAAAAGCTTTAGCCTTTTAATTCTCGCT
CCTTGCTGTGAGCCCTGAGCTGTCTTCTATGCACTTCGGCTATGTCTACTGTTTGGTCTCTTTG
TGTTCCTTGTTACTTGGTGCAATAGCAACTTCTTTGTGCATTCCATCTTTCCAGTTGTGTAAAG
TTCTTCACTTTTTTCTCTGAGGGTGTAGGGGGTGGGGGGAGTCAGCATGATTATATTTTAATGT
AGAAAATGTGACATCTGGATATAAAATGAAAATAAATGTTAAATTAAATGGAAGTTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038291452	(Get FASTA)	NCBI Sequence Viewer
	XP_038366397	(Get FASTA)	NCBI Sequence Viewer
	XP_038429851	(Get FASTA)	NCBI Sequence Viewer
	XP_038494162	(Get FASTA)	NCBI Sequence Viewer
	XP_543263	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000014848.3
	ENSCAFP00030041165.1
	ENSCAFP00040039356.1
	ENSCAFP00040039383.1
	ENSCAFP00040039427.1
	ENSCAFP00040039473.1
	ENSCAFP00845040403
	ENSCAFP00845040403.1

RefSeq Acc Id:

XP_543263 ⟸ XM_543263

- UniProtKB:

A0A8C0L183 (UniProtKB/TrEMBL), A0A8C0PWY1 (UniProtKB/TrEMBL), A0A8P0SEY4 (UniProtKB/TrEMBL), A0A8C0TTB9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MALRAMRGIVNGAAPELPVPTSGPVAGSREQALAVSRNYLSQPRLTYKTVSGVNGPLVILDHVK
FPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILRTPVSEDML
GRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIF
SAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDN
VCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGR
RGFPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLH
NRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDD
LLYLEFLQKFERNFIAQGPYENRTVYETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH

hide sequence

Ensembl Acc Id:

ENSCAFP00000014848 ⟸ ENSCAFT00000016053

RefSeq Acc Id:

XP_038366397 ⟸ XM_038510469

RefSeq Acc Id:

XP_038494162 ⟸ XM_038638234

RefSeq Acc Id:	XP_038291452 ⟸ XM_038435524
- UniProtKB:	A0A8I3Q2N9 (UniProtKB/TrEMBL), A0A8C0TTB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038429851 ⟸ XM_038573923
- UniProtKB:	A0A8C0L183 (UniProtKB/TrEMBL), A0A8C0PWY1 (UniProtKB/TrEMBL), A0A8C0TTB9 (UniProtKB/TrEMBL), A0A8P0SEY4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845040403 ⟸ ENSCAFT00845051491

Protein Domains

ATP synthase A/B type C-terminal ATPase F1/V1/A1 complex alpha/beta subunit ATPase F1/V1/A1 complex alpha/beta subunit N-

Promoters

RGD ID:

13687802

Promoter ID:

EPDNEW_C5870

Type:

multiple initiation site

Name:

ATP6V1B2_1

Description:

ATPase H+ transporting V1 subunit B2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	36,858,827 - 36,858,887	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000010095	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030025487	UniProtKB/TrEMBL
	ENSCAFG00040024165	UniProtKB/TrEMBL
	ENSCAFG00845029095	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000016053.5	UniProtKB/TrEMBL
	ENSCAFT00030047089.1	UniProtKB/TrEMBL
	ENSCAFT00040045038.1	UniProtKB/TrEMBL
	ENSCAFT00040045067.1	UniProtKB/TrEMBL
	ENSCAFT00040045114.1	UniProtKB/TrEMBL
	ENSCAFT00040045172.1	UniProtKB/TrEMBL
	ENSCAFT00845051491	ENTREZGENE
	ENSCAFT00845051491.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.12240	UniProtKB/TrEMBL
InterPro	ATP-synt_VA_C	UniProtKB/TrEMBL
	ATPase_a/bsu_AS	UniProtKB/TrEMBL
	ATPase_F1/V1/A1_a/bsu_N	UniProtKB/TrEMBL
	ATPase_F1/V1/A1_a/bsu_nucl-bd	UniProtKB/TrEMBL
	ATPase_V1-cplx_bsu	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	V-ATPase_su_B/beta	UniProtKB/TrEMBL
KEGG Report	cfa:486137	UniProtKB/TrEMBL
NCBI Gene	ATP6V1B2	ENTREZGENE
PANTHER	PTHR43389	UniProtKB/TrEMBL
	V-TYPE PROTON ATPASE SUBUNIT B, BRAIN ISOFORM	UniProtKB/TrEMBL
Pfam	ATP-synt_ab	UniProtKB/TrEMBL
	ATP-synt_ab_N	UniProtKB/TrEMBL
	ATP-synt_VA_C	UniProtKB/TrEMBL
PIRSF	V-ATPsynth_beta/V-ATPase_B	UniProtKB/TrEMBL
PROSITE	ATPASE_ALPHA_BETA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C0L183	ENTREZGENE
	A0A8C0PWY1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TPS9_CANLF	UniProtKB/TrEMBL
	A0A8C0TTB9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z606_CANLF	UniProtKB/TrEMBL
	A0A8I3Q2N9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SEY4	ENTREZGENE
UniProt Secondary	A0A8P0SEY4	UniProtKB/TrEMBL
VGNC ID	VGNC:38277	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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Imported Disease Annotations - OMIM