ZNF862 (zinc finger protein 862) - Rat Genome Database

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Gene: ZNF862 (zinc finger protein 862) Canis lupus familiaris
Analyze
Symbol: ZNF862
Name: zinc finger protein 862
RGD ID: 12134012
Description: ENCODES a protein that exhibits protein dimerization activity (inferred); proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN proton transmembrane transport (inferred); regulation of DNA-templated transcription (inferred); ASSOCIATED WITH gingival fibromatosis (ortholog); Gingival Fibromatosis 6 (ortholog); long QT syndrome (ortholog); FOUND IN membrane (inferred); proton-transporting V-type ATPase, V0 domain (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,604,106 - 14,641,952 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1614,604,288 - 14,639,077 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1615,212,987 - 15,250,640 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01616,319,185 - 16,356,857 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,363,411 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,699,143 - 14,736,802 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01615,280,045 - 15,317,710 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,330,252 - 15,368,376 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ZNF862
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,604,106 - 14,641,952 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1614,604,288 - 14,639,077 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1615,212,987 - 15,250,640 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01616,319,185 - 16,356,857 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,363,411 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,699,143 - 14,736,802 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01615,280,045 - 15,317,710 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,330,252 - 15,368,376 (+)NCBIUU_Cfam_GSD_1.0
ZNF862
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387149,838,375 - 149,867,479 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7149,838,375 - 149,867,479 (+)EnsemblGRCh38hg38GRCh38
GRCh377149,535,464 - 149,564,568 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367149,166,442 - 149,195,501 (+)NCBINCBI36Build 36hg18NCBI36
Celera7144,204,724 - 144,233,784 (+)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,610,955 - 143,639,977 (+)NCBIHuRef
CHM1_17149,544,088 - 149,573,147 (+)NCBICHM1_1
T2T-CHM13v2.07151,020,282 - 151,049,591 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27148,873,528 - 148,902,587 (+)NCBI
Zfp862-ps
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39648,481,273 - 48,511,766 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl648,481,308 - 48,509,057 (+)EnsemblGRCm39 Ensembl
GRCm39 Ensembl648,481,263 - 48,511,766 (+)EnsemblGRCm39 Ensembl
GRCm38648,504,339 - 48,534,832 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl648,504,337 - 48,534,832 (+)EnsemblGRCm38mm10GRCm38
MGSCv37648,454,338 - 48,484,831 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36648,458,558 - 48,464,418 (+)NCBIMGSCv36mm8
MGSCv36648,869,664 - 48,875,524 (+)NCBIMGSCv36mm8
Celera649,008,009 - 49,045,486 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map623.48NCBI
Zfp862
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8478,783,833 - 78,812,884 (+)NCBIGRCr8
mRatBN7.2477,452,930 - 77,481,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl477,453,037 - 77,481,995 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0478,136,183 - 78,165,230 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04142,799,898 - 142,828,927 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4476,590,094 - 76,617,188 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera472,390,446 - 72,419,495 (+)NCBICelera
Cytogenetic Map4q24NCBI
Znf862
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554914,892,436 - 4,922,827 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554914,892,147 - 4,924,851 (+)NCBIChiLan1.0ChiLan1.0
ZNF862
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26186,394,805 - 186,423,762 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1738,405,069 - 38,434,022 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07141,541,098 - 141,570,053 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17154,013,489 - 154,042,393 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7154,016,309 - 154,039,291 (+)Ensemblpanpan1.1panPan2
Znf862
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051186,988,297 - 7,020,417 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365275,882,773 - 5,915,319 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365275,883,034 - 5,915,132 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF862
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1855,849,196 - 55,874,157 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11855,842,970 - 55,883,476 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF862
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121118,404,425 - 118,433,456 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21118,404,579 - 118,430,412 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607214,364,086 - 14,393,114 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf862
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248006,170,952 - 6,186,971 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248006,168,965 - 6,193,093 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF862
405 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000047110   ⟹   ENSCAFP00000042868
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1614,604,288 - 14,639,077 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845016080   ⟹   ENSCAFP00845012504
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,363,411 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845016111   ⟹   ENSCAFP00845012530
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,353,982 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845016154   ⟹   ENSCAFP00845012565
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,353,982 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845016192   ⟹   ENSCAFP00845012596
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1616,319,185 - 16,353,982 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845016232   ⟹   ENSCAFP00845012627
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1616,356,969 - 16,363,409 (+)Ensembl
RefSeq Acc Id: XM_038452635   ⟹   XP_038308563
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1615,212,987 - 15,250,640 (+)NCBI
RefSeq Acc Id: XM_038498081   ⟹   XP_038354009
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11614,699,143 - 14,736,802 (+)NCBI
RefSeq Acc Id: XM_038559188   ⟹   XP_038415116
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01615,330,252 - 15,368,376 (+)NCBI
RefSeq Acc Id: XM_038623146   ⟹   XP_038479074
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01615,280,045 - 15,317,710 (+)NCBI
RefSeq Acc Id: XM_038690385   ⟹   XP_038546313
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01616,319,185 - 16,356,857 (+)NCBI
Ensembl Acc Id: ENSCAFP00000042868   ⟸   ENSCAFT00000047110
RefSeq Acc Id: XP_038354009   ⟸   XM_038498081
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038479074   ⟸   XM_038623146
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038546313   ⟸   XM_038690385
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PI58 (UniProtKB/TrEMBL),   A0A8I3N7U4 (UniProtKB/TrEMBL),   A0A8C0T6H2 (UniProtKB/TrEMBL),   A0A8I3NMI7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308563   ⟸   XM_038452635
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PI58 (UniProtKB/TrEMBL),   A0A8I3N7U4 (UniProtKB/TrEMBL),   A0A8C0T6H2 (UniProtKB/TrEMBL),   A0A8I3NMI7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038415116   ⟸   XM_038559188
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PI58 (UniProtKB/TrEMBL),   A0A8C0T6H2 (UniProtKB/TrEMBL),   A0A8I3N7U4 (UniProtKB/TrEMBL),   A0A8I3NMI7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845012596   ⟸   ENSCAFT00845016192
Ensembl Acc Id: ENSCAFP00845012565   ⟸   ENSCAFT00845016154
Ensembl Acc Id: ENSCAFP00845012504   ⟸   ENSCAFT00845016080
Ensembl Acc Id: ENSCAFP00845012530   ⟸   ENSCAFT00845016111
Ensembl Acc Id: ENSCAFP00845012627   ⟸   ENSCAFT00845016232
Protein Domains
KRAB

Promoters
RGD ID:13686057
Promoter ID:EPDNEW_C4124
Type:initiation region
Name:ZNF862_1
Description:zinc finger protein 862
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11614,604,347 - 14,604,407EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000004539 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030025144 UniProtKB/TrEMBL
  ENSCAFG00040019629 UniProtKB/TrEMBL
  ENSCAFG00845009122 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000047110.4 UniProtKB/TrEMBL
  ENSCAFT00000102192.1 UniProtKB/TrEMBL
  ENSCAFT00000104444.1 UniProtKB/TrEMBL
  ENSCAFT00000104845.1 UniProtKB/TrEMBL
  ENSCAFT00000106684.1 UniProtKB/TrEMBL
  ENSCAFT00030046419.1 UniProtKB/TrEMBL
  ENSCAFT00030046445.1 UniProtKB/TrEMBL
  ENSCAFT00030046457.1 UniProtKB/TrEMBL
  ENSCAFT00030046478.1 UniProtKB/TrEMBL
  ENSCAFT00030046493.1 UniProtKB/TrEMBL
  ENSCAFT00040036300.1 UniProtKB/TrEMBL
  ENSCAFT00040036316.1 UniProtKB/TrEMBL
  ENSCAFT00040036332.1 UniProtKB/TrEMBL
  ENSCAFT00040036389.1 UniProtKB/TrEMBL
  ENSCAFT00040036464.1 UniProtKB/TrEMBL
  ENSCAFT00845016080.1 UniProtKB/TrEMBL
  ENSCAFT00845016111 ENTREZGENE
  ENSCAFT00845016111.1 UniProtKB/TrEMBL
  ENSCAFT00845016154.1 UniProtKB/TrEMBL
  ENSCAFT00845016192.1 UniProtKB/TrEMBL
  ENSCAFT00845016232.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
InterPro ATPase_V0-cplx_e1/e2_su UniProtKB/TrEMBL
  ATPase_V0-cplx_e1/e2_su_met UniProtKB/TrEMBL
  HATC_C_dom UniProtKB/TrEMBL
  KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  RNaseH-like_sf UniProtKB/TrEMBL
  Znf_TTF UniProtKB/TrEMBL
NCBI Gene ZNF862 ENTREZGENE
PANTHER PTHR12263 UniProtKB/TrEMBL
  RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE SUBUNIT E 2 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 862 UniProtKB/TrEMBL
Pfam ATP_synt_H UniProtKB/TrEMBL
  Dimer_Tnp_hAT UniProtKB/TrEMBL
  KRAB UniProtKB/TrEMBL
PIRSF V-ATP_synth_e1/e2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_TTF UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF53098 UniProtKB/TrEMBL
UniProt A0A8C0PI58 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PL36_CANLF UniProtKB/TrEMBL
  A0A8C0PN12_CANLF UniProtKB/TrEMBL
  A0A8C0RTA6_CANLF UniProtKB/TrEMBL
  A0A8C0T601_CANLF UniProtKB/TrEMBL
  A0A8C0T6H2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Z2F1_CANLF UniProtKB/TrEMBL
  A0A8I3N0D9_CANLF UniProtKB/TrEMBL
  A0A8I3N692_CANLF UniProtKB/TrEMBL
  A0A8I3N7U4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NAL1_CANLF UniProtKB/TrEMBL
  A0A8I3NMI7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TN93_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:53511 ENTREZGENE