Advanced Search (OLGA)

Gene: SLC11A1 (solute carrier family 11 member 1) Canis lupus familiaris

Analyze

Symbol:

SLC11A1

Name:

solute carrier family 11 member 1

RGD ID:

12095488

Description:

ENCODES a protein that exhibits iron ion transmembrane transporter activity (ortholog); manganese ion transmembrane transporter activity (ortholog); metal cation:proton antiporter activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); iron ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); alacrima, achalasia, and impaired intellectual development syndrome (ortholog); asthma (ortholog); FOUND IN endosome (inferred); endosome membrane (inferred); late endosome (inferred)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

natural resistance-associated macrophage protein 1; NRAMP 1; NRAMP1; solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	25,039,203 - 25,047,461 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	25,038,360 - 25,047,282 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	25,859,294 - 25,867,379 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	25,054,994 - 25,063,083 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	25,053,097 - 25,063,084 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	24,960,561 - 24,968,638 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	24,894,238 - 24,902,300 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	24,914,545 - 24,922,623 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute kidney failure (ISO)

alacrima, achalasia, and impaired intellectual development syndrome (ISO)

asthma (ISO)

atopic dermatitis (ISO)

Behcet's disease (ISO)

Buruli ulcer disease (ISO)

campylobacteriosis (ISO)

cerebrotendinous xanthomatosis (ISO)

Chronic Hepatitis C (ISO)

colitis (ISO)

Crohn's disease (ISO)

cutaneous leishmaniasis (ISO)

cystic fibrosis (ISO)

Experimental Arthritis (ISO)

Experimental Colitis (ISO)

food allergy (ISO)

human immunodeficiency virus infectious disease (ISO)

Inflammation (ISO)

inflammatory bowel disease (ISO)

juvenile rheumatoid arthritis (ISO)

leprosy (ISO)

lymphoproliferative syndrome (ISO)

meningococcal meningitis (ISO)

Multibacillary Leprosy (ISO)

multiple sclerosis (ISO)

Mycobacterium Infections (ISO)

myofibrillar myopathy 1 (ISO)

Neurodevelopmental Disorders (ISO)

paroxysmal nonkinesigenic dyskinesia 1 (ISO)

pulmonary tuberculosis (ISO)

rheumatoid arthritis (ISO)

Salmonella Infections, Animal (ISO)

sarcoidosis (ISO)

systemic lupus erythematosus (ISO)

systemic scleroderma (ISO)

tuberculosis (ISO)

type 1 diabetes mellitus (ISO)

ulcerative colitis (ISO)

urinary bladder cancer (ISO)

visceral leishmaniasis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of protein kinase activity (ISO)

antigen processing and presentation of peptide antigen (IEA)

cadmium ion transmembrane transport (IEA)

cellular detoxification of cadmium ion (IEA)

defense response to bacterium (IEA)

defense response to Gram-negative bacterium (IEA)

defense response to protozoan (IEA)

establishment of localization in cell (IEA)

inflammatory response (IEA)

intracellular iron ion homeostasis (IBA,IEA)

intracellular manganese ion homeostasis (IBA)

iron ion transmembrane transport (IBA,IEA)

iron ion transport (IEA,ISS)

L-arginine transmembrane transport (IEA)

macrophage activation (IEA)

manganese ion transmembrane transport (IEA)

manganese ion transport (IBA,IEA,ISO,ISS,NAS)

MAPK cascade (ISO)

metal ion transport (IEA)

MHC class II biosynthetic process (IEA)

monoatomic ion transport (IEA)

mRNA stabilization (IEA)

multicellular organismal-level iron ion homeostasis (IEA)

negative regulation of cytokine production (IEA)

nitrite transport (IEA)

phagocytosis (IEA)

positive regulation of cytokine production (IEA)

positive regulation of dendritic cell antigen processing and presentation (IEA)

positive regulation of gene expression (IEA)

positive regulation of phagocytosis (IEA)

positive regulation of T-helper 1 type immune response (IEA)

positive regulation of transcription by RNA polymerase II (IEA)

positive regulation of type II interferon production (IEA)

proton transmembrane transport (IEA)

respiratory burst (IEA)

response to bacterium (IEA)

response to lipopolysaccharide (IEA)

response to type II interferon (IEA)

T cell proliferation involved in immune response (IEA)

vacuolar acidification (IEA)

wound healing (IEA)

Cellular Component

endosome (IEA)

endosome membrane (IBA,IEA)

late endosome (IEA)

late endosome membrane (IEA)

lysosomal membrane (IBA,IEA)

lysosome (IEA)

membrane (IEA,NAS)

phagocytic vesicle membrane (IBA,IEA)

plasma membrane (IBA,IEA)

tertiary granule membrane (IEA)

Molecular Function

iron ion transmembrane transporter activity (IBA,IEA,ISS)

manganese ion transmembrane transporter activity (IBA,IEA,ISS,NAS)

metal cation:proton antiporter activity (IBA,IEA,ISS)

metal ion transmembrane transporter activity (IEA)

protein homodimerization activity (IEA)

transition metal ion transmembrane transporter activity (IEA)

References

Additional References at PubMed

PMID:12010961	PMID:16251521	PMID:18307968	PMID:19084282	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLC11A1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	25,039,203 - 25,047,461 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	25,038,360 - 25,047,282 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	25,859,294 - 25,867,379 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	25,054,994 - 25,063,083 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	25,053,097 - 25,063,084 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	24,960,561 - 24,968,638 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	24,894,238 - 24,902,300 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	24,914,545 - 24,922,623 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

SLC11A1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	218,382,273 - 218,396,894 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	218,382,029 - 218,396,894 (+)	Ensembl			hg38	GRCh38
GRCh37	2	219,246,996 - 219,261,617 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	218,954,996 - 218,969,861 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	2	219,072,421 - 219,086,002	NCBI
Celera	2	213,013,369 - 213,028,238 (+)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	211,100,043 - 211,114,917 (+)	NCBI		HuRef
CHM1_1	2	219,253,406 - 219,268,272 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	218,868,403 - 218,883,023 (+)	NCBI		T2T-CHM13v2.0

Slc11a1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	74,414,318 - 74,429,974 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	74,414,354 - 74,425,221 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	74,375,014 - 74,386,057 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	74,375,195 - 74,386,062 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	74,421,777 - 74,432,625 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	74,308,436 - 74,319,269 (+)	NCBI		MGSCv36	mm8
Celera	1	74,932,506 - 74,943,551 (+)	NCBI		Celera
Cytogenetic Map	1	C3	NCBI
cM Map	1	38.54	NCBI

Slc11a1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	83,406,327 - 83,417,252 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	83,406,427 - 83,417,238 (+)	Ensembl				GRCr8
mRatBN7.2	9	75,957,193 - 75,968,115 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	75,957,316 - 75,968,101 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	84,402,352 - 84,413,166 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	89,531,293 - 89,542,107 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	87,917,487 - 87,928,297 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	81,655,590 - 81,666,697 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	81,655,629 - 81,666,706 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	81,420,556 - 81,431,345 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	73,714,692 - 73,725,523 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	73,531,012 - 73,541,597 (+)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

Slc11a1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	14,980,562 - 14,995,608 (-)	Ensembl
ChiLan1.0	NW_004955453	14,980,562 - 14,995,118 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC11A1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	121,013,434 - 121,028,331 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	121,028,394 - 121,041,725 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	105,640,613 - 105,655,524 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	224,238,284 - 224,252,941 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	224,238,284 - 224,252,941 (+)	Ensembl			panPan2	panpan1.1

Slc11a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	174,544,696 - 174,553,261 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	887,742 - 895,977 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936569	888,309 - 895,991 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC11A1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	120,433,952 - 120,446,396 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	120,434,100 - 120,446,396 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	133,452,820 - 133,454,896 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC11A1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	104,276,553 - 104,288,466 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666040	95,112,392 - 95,128,910 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc11a1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	6,612,452 - 6,625,300 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624823	6,612,452 - 6,625,047 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC11A1
146 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001013851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF091049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ784645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000023259 ⟹ ENSCAFP00000021599

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	25,038,360 - 25,047,282 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845047751 ⟹ ENSCAFP00845037468

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	25,053,097 - 25,063,084 (+)	Ensembl

RefSeq Acc Id:

NM_001013851 ⟹ NP_001013873

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	25,039,203 - 25,047,461 (+)	NCBI
Dog10K_Boxer_Tasha	37	25,859,294 - 25,867,379 (+)	NCBI
ROS_Cfam_1.0	37	25,054,994 - 25,063,083 (+)	NCBI
UMICH_Zoey_3.1	37	24,960,561 - 24,968,638 (+)	NCBI
UNSW_CanFamBas_1.0	37	24,894,238 - 24,902,300 (+)	NCBI
UU_Cfam_GSD_1.0	37	24,914,545 - 24,922,623 (+)	NCBI

Sequence:

show sequence

ATGACAGGTGACAAGGACCCCCAAAGTGTAAGCAGGCCCAACTATGGCTCCATCTCCCACCCAC
CCAGCTCAGAGCCACAGCAAGAACCTCTCAGAACAACCTACCTGAGTGAGAAGATCCCCATCCC
GGACACAGAACCGGGCACATTCAGCCTGAGGAAGCTGTGGGCCTTCACCGGGCCTGGCTTCCTC
ATGAGCATCGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCTG
GATTCAAACTGCTCTGGGTGCTGCTATGGGCCACGGTGCTGGGCTTGCTCTGCCAGCGCCTGGC
TGCCCGGCTGGGTGTGGTGACAGGCAAGGACTTGGGCGAGATCTGTCATCTCTACTACCCTAAG
GTGCCCCGCACCCTCCTCTGGCTGACCATCGAGCTAGCCATCGTGGGCTCGGACATGCAGGAGG
TCATCGGCACGGCCATCGCGTTCAGCCTGCTGTCAGCCGGCCGAATCCCACTCTGGGGTGGCGT
CCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTTGACAACTACGGGTTGCGGAAGCTG
GAAGCCTTTTTCGGAATCCTTATTACAATTATGGCCTTGACCTTCGGCTACGAGTACGTGGTGG
CACGTCCCGCCCAGGTAGCGCTTCTCCAGGGCCTGCTCCTGCCCTCGTGCCCCGGCTGCGGCCG
GCCGGAGCTGCTGCAGGCCGTGGGCATCGTCGGCGCCATCATCATGCCCCACAACATCTACCTG
CACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGGTCCCGCCGGCCGGACATCCGAGAAGCCA
ACATGTACTTCCTGATTGAGGCCAGCATCGCCCTGTCTGTCTCCTTCTTCATCAATCTCTTTGT
TGTAGCGGTGTTCGGGCAGGCCTTCTACCAGCAAACCAACGAGGCTGCGTTCAACGTCTGCGCC
AACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCAGGAACAACCTTACGGTGGAGGTGGACA
TCTACCAGGGAGGCGTGATGCTGGGCTGCGTCTTCGGGCCCGCGGCGCTCTACATCTGGGCCGT
GGGCCTCCTGGCGGCGGGACAGAGCTCCACCATGACCGGCACCTACGCGGGACAGTTTGTGATG
GAGGGCTTCCTGCGGCTGCGGTGGTCACGCTTCGCGCGGGTGCTCCTCACTCGCTCCTGCGCCA
TCCTGCCCACCGTGCTCGTGGTAGTCTTCAGGGACCTGAAAGACCTGTCAGGTCTCAACGACCT
GCTCAACGTGCTGCAGAGCCTGCTGCTTCCCTTTGCGGTGCTGCCTATCCTTACGTTCACCAGC
ATGCCAGCCCTCATGCAGGAGTTTGCCAATGGCCGGCTGAGCAAGGCCATCACATCCTTCATCA
TGGCCCTGGTCTGTGCCATCAACCTCTACTTCGTGGTCATCTACCTGCCCAGCCTCCCACACCC
TGCCTACTTCATCCTCGTAGCCCTTCTGGCTATAGTCTACCTGGGCCTCACCACCTATCTGGTC
TGGACCTGTTTCATTGCCCATGGAGTCACCCTTCTGGCCCACAGCTCCCATCAACACTTCCTGT
ATGGGCTCCCTGATGTGGAGGAGAAAGGGAAGATCTCTGGGTGAACTCCCATGCAGTGCCCCGC
TAGGGGGTGGAATGAGTGGGGCAGACTGGCCTGCTGGGGTGAGTGTGAAGACAGCAAGACCGAG
TGGGAGTTTTGAAGGCAGGCCAAGCTGGGTACCATCAGGACCTGCAGCTTCCGAGCTCCAGTGA
GTGATTAATCTCCAGTCTCGGTGTCCTCACCTGTAGAATGGGGACAACACCAACTGTGCAATGG
ACATAAAGCATTTTAACACAGTGCCTGACATTTTGGGACTTAAAAATAATAGTAATTCCAAAAA
TATTTATTGGACCCCTATGGGAGCGACCTGACCCATGGACCCAGTTGGGGGCGAATGAATGCTG
TTGAGTGCTCAATAAATGCTAGTTCACTTCTCTTGTCT

hide sequence

Protein Sequences


Protein RefSeqs	NP_001013873	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD37483	(Get FASTA)	NCBI Sequence Viewer
	ABG78262	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00845037468
GenBank Protein	Q9XT74	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001013873 ⟸ NM_001013851

- UniProtKB:

Q0PPT4 (UniProtKB/Swiss-Prot), Q9XT74 (UniProtKB/Swiss-Prot), A0A8C0TM07 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTGDKDPQSVSRPNYGSISHPPSSEPQQEPLRTTYLSEKIPIPDTEPGTFSLRKLWAFTGPGFL
MSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEICHLYYPK
VPRTLLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITIVDTFFFLFLDNYGLRKL
EAFFGILITIMALTFGYEYVVARPAQVALLQGLLLPSCPGCGRPELLQAVGIVGAIIMPHNIYL
HSALVKSREIDRSRRPDIREANMYFLIEASIALSVSFFINLFVVAVFGQAFYQQTNEAAFNVCA
NSSLHDYAKIFPRNNLTVEVDIYQGGVMLGCVFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVM
EGFLRLRWSRFARVLLTRSCAILPTVLVVVFRDLKDLSGLNDLLNVLQSLLLPFAVLPILTFTS
MPALMQEFANGRLSKAITSFIMALVCAINLYFVVIYLPSLPHPAYFILVALLAIVYLGLTTYLV
WTCFIAHGVTLLAHSSHQHFLYGLPDVEEKGKISG

hide sequence

Ensembl Acc Id:

ENSCAFP00000021599 ⟸ ENSCAFT00000023259

Ensembl Acc Id:

ENSCAFP00845037468 ⟸ ENSCAFT00845047751

Promoters

RGD ID:

13689150

Promoter ID:

EPDNEW_C7217

Type:

initiation region

Name:

SLC11A1_1

Description:

solute carrier family 11 member 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	25,038,380 - 25,038,440	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000014645	Ensembl
	ENSCAFG00845027087	Ensembl, ENTREZGENE
Ensembl Transcript	ENSCAFT00845047751	ENTREZGENE
InterPro	NRAMP_fam	UniProtKB/Swiss-Prot
KEGG Report	cfa:478909	UniProtKB/Swiss-Prot
NCBI Gene	SLC11A1	ENTREZGENE
PANTHER	NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR11706	UniProtKB/Swiss-Prot
Pfam	Nramp	UniProtKB/Swiss-Prot
PRINTS	NATRESASSCMP	UniProtKB/Swiss-Prot
UniProt	A0A8C0RRH3_CANLF	UniProtKB/TrEMBL
	A0A8C0TM07	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3QCU8_CANLF	UniProtKB/TrEMBL
	A0A8P0PK60_CANLF	UniProtKB/TrEMBL
	NRAM1_CANLF	UniProtKB/Swiss-Prot
	Q0PPT4	ENTREZGENE
	Q9XT74	ENTREZGENE
UniProt Secondary	Q0PPT4	UniProtKB/Swiss-Prot
VGNC ID	VGNC:46216	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM