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Gene: CTCF (CCCTC-binding factor) Canis lupus familiaris

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Symbol:

CTCF

Name:

CCCTC-binding factor

RGD ID:

12075858

Description:

ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin organization (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); autosomal dominant intellectual developmental disorder 21 (ortholog); basal cell carcinoma (ortholog); FOUND IN dense fibrillar component (ortholog); granular component (ortholog); INTERACTS WITH bisphenol A

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transcriptional repressor CTCF

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CTCF (CCCTC-binding factor)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Ctcf (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ctcf (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ctcf (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CTCF (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ctcf (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CTCF (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CTCF (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ctcf (CCCTC-binding factor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	81,808,512 - 81,863,811 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	81,809,393 - 81,858,655 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,471 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	82,243,654 - 82,298,999 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	82,243,653 - 82,298,955 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	82,069,946 - 82,125,241 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,353 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,348 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 6 (ISO)

autosomal dominant intellectual developmental disorder 21 (ISO)

basal cell carcinoma (ISO)

breast cancer (ISO)

breast carcinoma (ISO)

childhood acute lymphocytic leukemia (ISO)

Chromosome 16q12 Duplication Syndrome (ISO)

chromosome 16q22 deletion syndrome (ISO)

desmoplastic/nodular medulloblastoma (ISO)

Experimental Neoplasms (ISO)

female breast cancer (ISO)

genetic disease (ISO)

intellectual disability (ISO)

myeloid leukemia associated with Down Syndrome (ISO)

primary cutaneous T-cell non-Hodgkin lymphoma (ISO)

Retinal Neovascularization (ISO)

skin melanoma (ISO)

skin squamous cell carcinoma (ISO)

T-cell acute lymphoblastic leukemia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

bisphenol A (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cardiac muscle cell development (IEA,ISO)

cardiac muscle cell differentiation (IEA,ISO)

chromatin looping (IEA)

chromatin organization (IEA,ISO)

DNA methylation-dependent constitutive heterochromatin formation (IEA,ISO)

epigenetic regulation of gene expression (IEA,ISO)

gene expression (IEA,ISO)

genomic imprinting (IEA,ISO)

heart development (IEA,ISO)

in utero embryonic development (IEA,ISO)

mitochondrion organization (IEA,ISO)

negative regulation of cell population proliferation (IEA)

negative regulation of DNA-templated transcription (IEA)

negative regulation of gene expression (IEA)

negative regulation of gene expression via chromosomal CpG island methylation (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

positive regulation of DNA-templated transcription (IEA)

positive regulation of gene expression (IEA)

positive regulation of miRNA transcription (ISO)

positive regulation of transcription by RNA polymerase II (IEA)

protein localization to chromosome, centromeric region (IEA)

regulation of DNA-templated transcription (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

chromosome, centromeric region (IEA)

condensed chromosome (IEA)

dense fibrillar component (ISO)

granular component (ISO)

male germ cell nucleus (IEA)

nucleolus (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

chromatin binding (IEA)

chromatin insulator sequence binding (IEA)

chromatin loop anchoring activity (IEA)

cis-regulatory region sequence-specific DNA binding (IEA)

DNA binding (IEA)

DNA-binding transcription factor activity (IBA,IEA)

DNA-binding transcription factor binding (ISO)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IEA)

sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

transcription cis-regulatory region binding (IEA)

transcription coregulator binding (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

CTCF
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	81,808,512 - 81,863,811 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	81,809,393 - 81,858,655 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,471 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	82,243,654 - 82,298,999 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	82,243,653 - 82,298,955 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	82,069,946 - 82,125,241 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,353 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,348 (-)	NCBI		UU_Cfam_GSD_1.0

CTCF
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	67,562,526 - 67,639,185 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	67,562,467 - 67,639,177 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	67,596,429 - 67,673,088 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	66,153,965 - 66,230,589 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	66,153,963 - 66,230,580	NCBI
Celera	16	52,104,229 - 52,181,578 (+)	NCBI		Celera
Cytogenetic Map	16	q22.1	NCBI
HuRef	16	53,469,579 - 53,546,004 (+)	NCBI		HuRef
CHM1_1	16	69,003,654 - 69,080,781 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	73,357,293 - 73,433,954 (+)	NCBI		T2T-CHM13v2.0

Ctcf
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	106,351,135 - 106,409,554 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	106,363,200 - 106,409,554 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	105,636,474 - 105,682,922 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	105,636,568 - 105,682,922 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	108,160,438 - 108,206,822 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	108,525,670 - 108,572,051 (+)	NCBI		MGSCv36	mm8
Celera	8	109,860,822 - 109,907,765 (+)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	53.04	NCBI

Ctcf
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	50,431,478 - 50,481,013 (+)	NCBI		GRCr8
mRatBN7.2	19	33,521,726 - 33,571,124 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	33,529,319 - 33,571,123 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	40,337,528 - 40,386,695 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	40,990,859 - 41,040,027 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	43,288,547 - 43,337,784 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	37,600,151 - 37,649,674 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	37,600,148 - 37,649,673 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	48,467,547 - 48,516,378 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,461,942 - 35,514,934 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	35,466,822 - 35,519,814 (+)	NCBI
Celera	19	32,950,156 - 32,999,072 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Ctcf
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	9,042,524 - 9,064,927 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	9,041,226 - 9,092,924 (-)	NCBI	ChiLan1.0	ChiLan1.0

CTCF
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	77,090,712 - 77,167,572 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	83,003,393 - 83,080,048 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	47,906,503 - 47,983,271 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	67,302,952 - 67,372,041 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	67,302,952 - 67,372,041 (+)	Ensembl	panpan1.1		panPan2

Ctcf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	41,557,377 - 41,601,957 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	17,987,156 - 18,031,760 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	17,987,137 - 18,031,733 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTCF
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	28,195,647 - 28,261,009 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	28,188,002 - 28,261,009 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	25,467,984 - 25,508,432 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTCF
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	59,806,753 - 59,889,534 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	59,806,551 - 59,880,049 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	22,559,050 - 22,640,771 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ctcf
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	18,706,663 - 18,760,203 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	18,705,017 - 18,760,345 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CTCF
425 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005620819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014114086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014114087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038477385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038477386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038477387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038477388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038477389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038477390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602707	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602711	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602712	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_859339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000032418 ⟹ ENSCAFP00000030188

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	81,809,393 - 81,858,655 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013129 ⟹ ENSCAFP00845010214

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	82,243,653 - 82,298,955 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845013208 ⟹ ENSCAFP00845010264

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	82,243,663 - 82,294,666 (-)	Ensembl

RefSeq Acc Id:

XM_014114086 ⟹ XP_013969561

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	81,808,512 - 81,863,791 (-)	NCBI
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,453 (-)	NCBI

Sequence:

show sequence

CCGCGCCGCCGCCATTTTGTGTCCGAGCCTGTGGAGCGATTAAACCGTGCGCGGAGCTGCTTCT
TTGGCGGCAGCGGCGGTGGCGGTAGCCGGTGCGGGTGCGCGGAGCTGGCCGGGGACGCCGGGTG
GCCGGAGCGGTGGAGCGGCGGCGGAGCGGGCGCTGCAGGGGGTGTGGCGCGGAGAATGATTGCA
GATCTGGAGCCAAAGAACAAGATGCACTAGTGGACAGATTGCTAACCAGGGGCTTGAGAGTTCT
GTTTTCCCTCCTCAAACTGACTTTGCAGTCACGGAGAGGGTACAAAGTGGTATGATTCCGGGGT
ACTTGAAGCCACAAGATAAACATGATCCATCTTCTTGGAGCTTCAATTGTGCTCATTGAGGGGG
CGGTGAGTTAAGTAATTTGACTGCTAACTTGCTGATTTCATGGCATCATGACCAATATGACGGA
TTATCCTTTAAAACAGCCATGGCAGGCATAGAGGAAGGGGAAATGGAAGGTGAGGCGGTTGAAG
CCATTGTGGAAGAGTCTGAAACTTTCATTAAAGGAAAGGAAAGAAAGACTTATCAGAGACGCCG
GGAAGGGGGCCAGGAAGAGGATACTTGCCACCTACCCCAGAACCAGACTGATGGGGGTGAGGTG
GTCCAGGATGTCAATAGCAGTGTACAGATGGTAATGATGGAACAACTGGATCCTACCCTTCTTC
AGATGAAGACTGAAGTAATGGAGGGTACAGTCGCTCCAGAAGCAGAGGCTGCTGTGGACGATAC
CCAGATCATAACTTTGCAGGTTGTAAATATGGAAGAACAGCCTATAAACATAGGAGAGCTTCAG
CTTGTCCAAGTACCTGTTCCTGTGACTGTACCTGTTGCTACCACTTCAGTTGAGGAACTTCAGG
GGGCTTATGAGAATGAAGTATCTAAAGAGGGCCTTGCAGAAAGCGAACCCATGATATGTCACAC
CTTACCTTTGCCTGAAGGGTTTCAAGTGGTGAAAGTAGGTGCCAATGGAGAGGTGGAGACGCTA
GAGCAAGGGGAACTTCCACCTCAAGAAGATCCTAGTTGGCAAAAAGACCCAGATTATCAGCCAC
CAGCCAAAAAAACAAAGAAAACCAAAAAGAGCAAACTGCGTTACACAGAGGAAGGCAAAGATGT
GGATGTGTCTGTCTATGATTTTGAGGAAGAACAGCAGGAGGGCCTGCTGTCAGAGGTTAATGCA
GAGAAAGTAGTTGGTAACATGAAGCCTCCAAAACCAACAAAAATTAAAAAGAAAGGTGTAAAGA
AGACATTCCAGTGTGAGCTTTGCAGTTATACATGTCCACGGCGTTCAAATTTGGATCGTCACAT
GAAAAGTCACACTGATGAGAGACCACACAAGTGCCATCTCTGTGGCAGGGCATTCAGAACAGTC
ACCCTCCTGAGGAATCACCTTAACACACACACAGGTACTCGTCCTCACAAGTGCCCAGATTGTG
ACATGGCCTTTGTGACTAGTGGAGAATTGGTGCGGCATCGTCGTTATAAACACACCCATGAGAA
GCCATTTAAGTGTTCCATGTGCGATTACGCCAGCGTAGAAGTCAGCAAATTAAAACGTCATATC
CGTTCTCATACTGGAGAGCGTCCGTTCCAGTGCAGCTTGTGCAGTTACGCCAGCAGGGACACAT
ACAAGCTGAAAAGGCACATGAGAACCCATTCAGGGGAAAAACCTTATGAATGTTATATTTGTCA
TGCTCGGTTTACCCAAAGTGGTACCATGAAGATGCACATTTTACAGAAGCACACAGAAAATGTG
GCCAAATTTCACTGTCCCCACTGTGACACTGTCATAGCCCGAAAAAGTGATTTGGGTGTCCACT
TGAGAAAGCAGCATTCCTATATTGAGCAAGGCAAGAAATGTCGATACTGCGATGCTGTGTTTCA
TGAGCGCTATGCCCTCATCCAGCATCAGAAGTCACACAAGAATGAGAAGCGCTTTAAGTGTGAC
CAGTGTGATTATGCTTGCAGACAGGAGAGGCACATGATCATGCATAAACGTACACACACCGGGG
AGAAGCCTTATGCCTGCAGCCACTGCGACAAGACCTTCCGCCAGAAACAGCTCCTCGACATGCA
CTTCAAACGCTATCATGACCCCAACTTTGTCCCTGCGGCCTTTGTCTGTTCTAAGTGTGGAAAA
ACATTTACACGCCGGAATACCATGGCAAGACATGCTGACAATTGCGCTGGTCCAGATGGCGTAG
AAGGGGAAAATGGTGGGGAGACAAAGAAGAGTAAACGTGGCAGAAAAAGAAAGATGCGTTCCAA
AAAAGAAGACTCCTCTGACAGTGAAAATGCTGAGCCAGACCTGGATGACAATGAGGATGAGGAA
GAACCTGCTGTGGAAATTGAACCCGAGCCAGAGCCTCAGCCTGTGACCCCAGCCCCACCACCTG
CCAAGAAGCGGAGAGGACGCCCTCCTGGCAGAACCAACCAGCCCAAACAGAACCAGCCAACAGC
CATCATCCAAGTGGAAGATCAGAATACAGGTGCAATTGAGAACATTATAGTTGAAGTCAAAAAA
GAGCCAGATGCAGAGCCCGTAGAGGGGGAGGAAGAGGAGGCTCAACCAGCTGCCACAGACGCCC
CCAACGGAGACCTCACGCCCGAGATGATCCTCAGCATGATGGACCGGTGATGGCGGGGCCTTGC
TCATCGCCAAGACTGCTCTGGGCTGTGTTTAAACGGCCCGCATCTTAATTTTTCTCCCTTCTTT
CTTCTTTTGGCTTTGGGAAAAGCATCATTTTACACCATTTTACCAAACATACTGCGAACTAAAA
CTTCAAGGATGATGTTAGAAAAATGTGATTTTACTAGAACTTGCTGTTTGATGTTAGCAAATCA
TGGAATGTTCTGAGTCCCCAAGGGTTTACTATGAAGTGCTGAGGACAGTCTTGATGCCTAACTG
GTTTTCTTAGATGGAAACAGAGACATTGAACCCTCTCTCTTGCTATGGTAAACCACTCCAGAAT
GGCCACCGGGTTTCCCAGAGTTCTAGGTCTTCTTCCCAGGAGAGTTTTTAATTGTAAATGCAGA
CTGGGAAGGACTTACACTTTTAAACTGATTTTTGCTTCTGCTTCTCCCTGACTCCCTTTGCTCG
GAGCCAGCTGCACACCAGTAGTACGGCATGCTGCAGTCGGTGTCTGTCCTGAAGGCTTTGCCTC
TTTCTTGGCAAAGTTTCTGGTATGGTCAAGCTTGTAAATAACTTTTTTTACATTTTAATCTTTT
CCATTAATTAAGAGGTTGAAAAGAAGTGCAGTGTAAGAAAACCCAGCATTTTAATTACTTGCAA
ATTAAGTTACCACAGACTCTGTAGTGTGTAAATGTTGACAAGGAATTGGATCACAATCATGTAG
CAGAATGGCACCCAGACTGCTGCCCGCTAGTGATGGACACCCACGTGGAAGATCGTGATTTCCA
GCCCATGGAGCCAGCATTTGAACCTTGTACAATTAACTTTCAGTTATGATTTCCCATCTACATT
TTCTTTGCTCTGTTTGTAGCTGAATTTTGTGTTTTATGACTCCTCTGTTCAAGCAGAAGGGTGA
TTATGAGTGGGTCACAGCAGCCCTTAAAAGCTGGGCCAGAAAATTTCACTAGGTCAGTAATTTA
AACTTTGGATCTGCAAAAAAAATAAAAATAATAAACAATAATAATGTGAAACAAAACCAACTAA
AAAATGATTCTTGCACATGAACTGTCACATGTTTGAAATGTGTTTTTTAGAGAGCCTCAGTCTT
GCTGATTTCAAACACTTTTTTCTTCTGTGTATTGCTTTTAAAAGAGCCATCAGTTAGCTATCAG
ACTCTAGGTTGATGCATTTTGTACTTAGCTGTACTGTGTGATATTTTTCATTATTTTAGGACGC
CAACATGAGACCTGTAATAAAATATGTAATGGGGTTGAAAGCTGGGGAGGAGGATCTACTGCTG
TACAGCTAATAAATCATAACGGATTAACAAGTGCTCCAGACA

hide sequence

RefSeq Acc Id:

XM_014114087 ⟹ XP_013969562

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	81,808,512 - 81,863,790 (-)	NCBI
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,452 (-)	NCBI

Sequence:

show sequence

CGCGCCGCCGCCATTTTGTGTCCGAGCCTGTGGAGCGATTAAACCGTGCGCGGAGCTGCTTCTT
TGGCGGCAGCGGCGGTGGCGGTAGCCGGTGCGGGTGCGCGGAGCTGGCCGGGGACGCCGGGTGG
CCGGAGCGGTGGAGCGGCGGCGGAGCGGGCGCTGCAGGGGGTGTGGCGCGGAGAATGATTGCAG
ATCTGGAGCCAAAGAACAAGATGCACTAGTGGACAGATTGCTAACCAGGGGCTTGAGAGTTCTG
TTTTCCCTCCTCAAACTGACTTTGCAGTCACGGAGAGGGTACAAAGTGGTATGATTCCGGGGTA
CTTGAAGCCACAAGATAAACATGATCCATCTTCTTGGAGCTTCAATTGTGCTCATTGAGGGGGC
GGTGAGTTAAGTAATTTGACTGCTAACTTGCTGATTTCATGGCATCATGACCAATATGACGGAT
TATCCTTTAAAACAGCCATGGCAGGCATAGAGGAAGGGGAAATGGAAGGTGAGGCGGTTGAAGC
CATTGTGGAAGAGTCTGAAACTTTCATTAAAGGAAAGGAAAGAAAGACTTATCAGAGACGCCGG
GAAGGGGGCCAGGAAGAGGATACTTGCCACCTACCCCAGAACCAGACTGATGGGGGTGAGGTGG
TCCAGGATGTCAATAGCAGTGTACAGATGGTAATGATGGAACAACTGGATCCTACCCTTCTTCA
GATGAAGACTGAAGTAATGGAGGGTACAGTCGCTCCAGAAGCAGAGGCTGCTGTGGACGATACC
CAGATCATAACTTTGCAGGTTGTAAATATGGAAGAACAGCCTATAAACATAGGAGAGCTTCAGC
TTGTCCAAGTACCTGTTCCTGTGACTGTACCTGTTGCTACCACTTCAGTTGAGGAACTTCAGGG
GGCTTATGAGAATGAAGTATCTAAAGAGGGCCTTGCAGAAAGCGAACCCATGATATGTCACACC
TTACCTTTGCCTGAAGGGTTTCAAGTGGTGAAAGTAGGTGCCAATGGAGAGGTGGAGACGCTAG
AGCAAGGGGAACTTCCACCTCAAGAAGATCCTAGTTGGCAAAAAGACCCAGATTATCAGCCACC
AGCCAAAAAAACAAAGAAAACCAAAAAGAGCAAACTGCGTTACACAGAGGAAGGCAAAGATGTG
GATGTGTCTGTCTATGATTTTGAGGAAGAACAGCAGGAGGGCCTGCTGTCAGAGGTTAATGCAG
AGAAAGTAGTTGGTAACATGAAGCCTCCAAAACCAACAAAAATTAAAAAGAAAGGTGTAAAGAA
GACATTCCAGTGTGAGCTTTGCAGTTATACATGTCCACGGCGTTCAAATTTGGATCGTCACATG
AAAAGTCACACTGATGAGAGACCACACAAGTGCCATCTCTGTGGCAGGGCATTCAGAACAGTCA
CCCTCCTGAGGAATCACCTTAACACACACACAGGTACTCGTCCTCACAAGTGCCCAGATTGTGA
CATGGCCTTTGTGACTAGTGGAGAATTGGTGCGGCATCGTCGTTATAAACACACCCATGAGAAG
CCATTTAAGTGTTCCATGTGCGATTACGCCAGCGTAGAAGTCAGCAAATTAAAACGTCATATCC
GTTCTCATACTGGAGAGCGTCCGTTCCAGTGCAGCTTGTGCAGTTACGCCAGCAGGGACACATA
CAAGCTGAAAAGGCACATGAGAACCCATTCAGGGGAAAAACCTTATGAATGTTATATTTGTCAT
GCTCGGTTTACCCAAAGTGGTACCATGAAGATGCACATTTTACAGAAGCACACAGAAAATGTGG
CCAAATTTCACTGTCCCCACTGTGACACTGTCATAGCCCGAAAAAGTGATTTGGGTGTCCACTT
GAGAAAGCAGCATTCCTATATTGAGCAAGGCAAGAAATGTCGATACTGCGATGCTGTGTTTCAT
GAGCGCTATGCCCTCATCCAGCATCAGAAGTCACACAAGAATGAGAAGCGCTTTAAGTGTGACC
AGTGTGATTATGCTTGCAGACAGGAGAGGCACATGATCATGCATAAACGTACACACACCGGGGA
GAAGCCTTATGCCTGCAGCCACTGCGACAAGACCTTCCGCCAGAAACAGCTCCTCGACATGCAC
TTCAAACGCTATCATGACCCCAACTTTGTCCCTGCGGCCTTTGTCTGTTCTAAGTGTGGAAAAA
CATTTACACGCCGGAATACCATGGCAAGACATGCTGACAATTGCGCTGGTCCAGATGGCGTAGA
AGGGGAAAATGGTGGGGAGACAAAGAAGAGTAAACGTGGCAGAAAAAGAAAGATGCGTTCCAAA
AAAGAAGACTCCTCTGACAGTGAAAATGCTGAGCCAGACCTGGATGACAATGAGGATGAGGAAG
AACCTGCTGTGGAAATTGAACCCGAGCCAGAGCCTCAGCCTGTGACCCCAGCCCCACCACCTGC
CAAGAAGCGGAGAGGACGCCCTCCTGGCAGAACCAACCAGCCCAAACAGAACCAGCCCATCATC
CAAGTGGAAGATCAGAATACAGGTGCAATTGAGAACATTATAGTTGAAGTCAAAAAAGAGCCAG
ATGCAGAGCCCGTAGAGGGGGAGGAAGAGGAGGCTCAACCAGCTGCCACAGACGCCCCCAACGG
AGACCTCACGCCCGAGATGATCCTCAGCATGATGGACCGGTGATGGCGGGGCCTTGCTCATCGC
CAAGACTGCTCTGGGCTGTGTTTAAACGGCCCGCATCTTAATTTTTCTCCCTTCTTTCTTCTTT
TGGCTTTGGGAAAAGCATCATTTTACACCATTTTACCAAACATACTGCGAACTAAAACTTCAAG
GATGATGTTAGAAAAATGTGATTTTACTAGAACTTGCTGTTTGATGTTAGCAAATCATGGAATG
TTCTGAGTCCCCAAGGGTTTACTATGAAGTGCTGAGGACAGTCTTGATGCCTAACTGGTTTTCT
TAGATGGAAACAGAGACATTGAACCCTCTCTCTTGCTATGGTAAACCACTCCAGAATGGCCACC
GGGTTTCCCAGAGTTCTAGGTCTTCTTCCCAGGAGAGTTTTTAATTGTAAATGCAGACTGGGAA
GGACTTACACTTTTAAACTGATTTTTGCTTCTGCTTCTCCCTGACTCCCTTTGCTCGGAGCCAG
CTGCACACCAGTAGTACGGCATGCTGCAGTCGGTGTCTGTCCTGAAGGCTTTGCCTCTTTCTTG
GCAAAGTTTCTGGTATGGTCAAGCTTGTAAATAACTTTTTTTACATTTTAATCTTTTCCATTAA
TTAAGAGGTTGAAAAGAAGTGCAGTGTAAGAAAACCCAGCATTTTAATTACTTGCAAATTAAGT
TACCACAGACTCTGTAGTGTGTAAATGTTGACAAGGAATTGGATCACAATCATGTAGCAGAATG
GCACCCAGACTGCTGCCCGCTAGTGATGGACACCCACGTGGAAGATCGTGATTTCCAGCCCATG
GAGCCAGCATTTGAACCTTGTACAATTAACTTTCAGTTATGATTTCCCATCTACATTTTCTTTG
CTCTGTTTGTAGCTGAATTTTGTGTTTTATGACTCCTCTGTTCAAGCAGAAGGGTGATTATGAG
TGGGTCACAGCAGCCCTTAAAAGCTGGGCCAGAAAATTTCACTAGGTCAGTAATTTAAACTTTG
GATCTGCAAAAAAAATAAAAATAATAAACAATAATAATGTGAAACAAAACCAACTAAAAAATGA
TTCTTGCACATGAACTGTCACATGTTTGAAATGTGTTTTTTAGAGAGCCTCAGTCTTGCTGATT
TCAAACACTTTTTTCTTCTGTGTATTGCTTTTAAAAGAGCCATCAGTTAGCTATCAGACTCTAG
GTTGATGCATTTTGTACTTAGCTGTACTGTGTGATATTTTTCATTATTTTAGGACGCCAACATG
AGACCTGTAATAAAATATGTAATGGGGTTGAAAGCTGGGGAGGAGGATCTACTGCTGTACAGCT
AATAAATCATAACGGATTAACAAGTGCTCCAGACA

hide sequence

RefSeq Acc Id:

XM_038477385 ⟹ XP_038333313

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	82,069,946 - 82,125,226 (-)	NCBI

RefSeq Acc Id:

XM_038477386 ⟹ XP_038333314

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	82,069,946 - 82,125,223 (-)	NCBI

RefSeq Acc Id:

XM_038477387 ⟹ XP_038333315

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	82,069,946 - 82,125,225 (-)	NCBI

RefSeq Acc Id:

XM_038477388 ⟹ XP_038333316

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	82,069,946 - 82,125,222 (-)	NCBI

RefSeq Acc Id:

XM_038477389 ⟹ XP_038333317

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	82,069,946 - 82,125,241 (-)	NCBI

RefSeq Acc Id:

XM_038477390 ⟹ XP_038333318

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	82,069,946 - 82,125,226 (-)	NCBI

RefSeq Acc Id:

XM_038530173 ⟹ XP_038386101

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,456 (-)	NCBI

RefSeq Acc Id:

XM_038530186 ⟹ XP_038386114

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,455 (-)	NCBI

RefSeq Acc Id:

XM_038530200 ⟹ XP_038386128

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,471 (-)	NCBI

RefSeq Acc Id:

XM_038530206 ⟹ XP_038386134

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	81,798,220 - 81,853,456 (-)	NCBI

RefSeq Acc Id:

XM_038538591 ⟹ XP_038394519

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,333 (-)	NCBI

RefSeq Acc Id:

XM_038538592 ⟹ XP_038394520

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,330 (-)	NCBI

RefSeq Acc Id:

XM_038538593 ⟹ XP_038394521

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,332 (-)	NCBI

RefSeq Acc Id:

XM_038538595 ⟹ XP_038394523

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,329 (-)	NCBI

RefSeq Acc Id:

XM_038538596 ⟹ XP_038394524

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,348 (-)	NCBI

RefSeq Acc Id:

XM_038538597 ⟹ XP_038394525

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	82,394,029 - 82,449,333 (-)	NCBI

RefSeq Acc Id:

XM_038602707 ⟹ XP_038458635

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,338 (-)	NCBI

RefSeq Acc Id:

XM_038602708 ⟹ XP_038458636

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,335 (-)	NCBI

RefSeq Acc Id:

XM_038602709 ⟹ XP_038458637

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,337 (-)	NCBI

RefSeq Acc Id:

XM_038602710 ⟹ XP_038458638

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,334 (-)	NCBI

RefSeq Acc Id:

XM_038602711 ⟹ XP_038458639

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,353 (-)	NCBI

RefSeq Acc Id:

XM_038602712 ⟹ XP_038458640

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	81,751,450 - 81,806,338 (-)	NCBI

RefSeq Acc Id:

XM_038667316 ⟹ XP_038523244

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	82,243,654 - 82,298,984 (-)	NCBI

RefSeq Acc Id:

XM_038667317 ⟹ XP_038523245

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	82,243,654 - 82,298,981 (-)	NCBI

RefSeq Acc Id:

XM_038667318 ⟹ XP_038523246

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	82,243,654 - 82,298,983 (-)	NCBI

RefSeq Acc Id:

XM_038667319 ⟹ XP_038523247

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	82,243,654 - 82,298,980 (-)	NCBI

RefSeq Acc Id:

XM_038667320 ⟹ XP_038523248

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	82,243,654 - 82,298,999 (-)	NCBI

RefSeq Acc Id:

XM_038667321 ⟹ XP_038523249

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	82,243,654 - 82,298,984 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013969561	(Get FASTA)	NCBI Sequence Viewer
	XP_013969562	(Get FASTA)	NCBI Sequence Viewer
	XP_038333313	(Get FASTA)	NCBI Sequence Viewer
	XP_038333314	(Get FASTA)	NCBI Sequence Viewer
	XP_038333315	(Get FASTA)	NCBI Sequence Viewer
	XP_038333316	(Get FASTA)	NCBI Sequence Viewer
	XP_038333317	(Get FASTA)	NCBI Sequence Viewer
	XP_038333318	(Get FASTA)	NCBI Sequence Viewer
	XP_038386101	(Get FASTA)	NCBI Sequence Viewer
	XP_038386114	(Get FASTA)	NCBI Sequence Viewer
	XP_038386128	(Get FASTA)	NCBI Sequence Viewer
	XP_038386134	(Get FASTA)	NCBI Sequence Viewer
	XP_038394519	(Get FASTA)	NCBI Sequence Viewer
	XP_038394520	(Get FASTA)	NCBI Sequence Viewer
	XP_038394521	(Get FASTA)	NCBI Sequence Viewer
	XP_038394523	(Get FASTA)	NCBI Sequence Viewer
	XP_038394524	(Get FASTA)	NCBI Sequence Viewer
	XP_038394525	(Get FASTA)	NCBI Sequence Viewer
	XP_038458635	(Get FASTA)	NCBI Sequence Viewer
	XP_038458636	(Get FASTA)	NCBI Sequence Viewer
	XP_038458637	(Get FASTA)	NCBI Sequence Viewer
	XP_038458638	(Get FASTA)	NCBI Sequence Viewer
	XP_038458639	(Get FASTA)	NCBI Sequence Viewer
	XP_038458640	(Get FASTA)	NCBI Sequence Viewer
	XP_038523244	(Get FASTA)	NCBI Sequence Viewer
	XP_038523245	(Get FASTA)	NCBI Sequence Viewer
	XP_038523246	(Get FASTA)	NCBI Sequence Viewer
	XP_038523247	(Get FASTA)	NCBI Sequence Viewer
	XP_038523248	(Get FASTA)	NCBI Sequence Viewer
	XP_038523249	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000030188.4
	ENSCAFP00000071888.1
	ENSCAFP00030011660.1
	ENSCAFP00040025705.1
	ENSCAFP00845010214
	ENSCAFP00845010214.1
	ENSCAFP00845010264
	ENSCAFP00845010264.1

RefSeq Acc Id:

XP_013969562 ⟸ XM_014114087

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAGIEEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNS
SVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELP
PQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGN
MKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNH
LNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGE
RPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP
HCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYAC
RQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN
TMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEI
EPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQNQPIIQVEDQNTGAIENIIVEVKKEPDAEPVE
GEEEEAQPAATDAPNGDLTPEMILSMMDR

hide sequence

RefSeq Acc Id:

XP_013969561 ⟸ XM_014114086

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAGIEEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNS
SVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELP
PQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGN
MKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNH
LNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGE
RPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP
HCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYAC
RQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN
TMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEI
EPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEP
VEGEEEEAQPAATDAPNGDLTPEMILSMMDR

hide sequence

Ensembl Acc Id:

ENSCAFP00000030188 ⟸ ENSCAFT00000032418

RefSeq Acc Id:	XP_038333317 ⟸ XM_038477389
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038333318 ⟸ XM_038477390
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038333313 ⟸ XM_038477385
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038333315 ⟸ XM_038477387
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038333314 ⟸ XM_038477386
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038333316 ⟸ XM_038477388
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038458639 ⟸ XM_038602711
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038458640 ⟸ XM_038602712
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038458635 ⟸ XM_038602707
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038458637 ⟸ XM_038602709
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038458636 ⟸ XM_038602708
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038458638 ⟸ XM_038602710
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038523248 ⟸ XM_038667320
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038523249 ⟸ XM_038667321
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038523244 ⟸ XM_038667316
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038523246 ⟸ XM_038667318
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038523245 ⟸ XM_038667317
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038523247 ⟸ XM_038667319
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038386128 ⟸ XM_038530200
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038386134 ⟸ XM_038530206
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038386101 ⟸ XM_038530173
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038386114 ⟸ XM_038530186
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038394524 ⟸ XM_038538596
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038394525 ⟸ XM_038538597
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038394519 ⟸ XM_038538591
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038394521 ⟸ XM_038538593
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038394520 ⟸ XM_038538592
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038394523 ⟸ XM_038538595
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSCAFP00845010214 ⟸ ENSCAFT00845013129

Ensembl Acc Id:

ENSCAFP00845010264 ⟸ ENSCAFT00845013208

Protein Domains

C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000020355	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007159	UniProtKB/TrEMBL
	ENSCAFG00040015979	UniProtKB/TrEMBL
	ENSCAFG00845007437	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000032418.5	UniProtKB/TrEMBL
	ENSCAFT00000104910.1	UniProtKB/TrEMBL
	ENSCAFT00030013352.1	UniProtKB/TrEMBL
	ENSCAFT00040029590.1	UniProtKB/TrEMBL
	ENSCAFT00845013129	ENTREZGENE
	ENSCAFT00845013129.1	UniProtKB/TrEMBL
	ENSCAFT00845013208	ENTREZGENE
	ENSCAFT00845013208.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	C2H2-ZF_domain-containing	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	CTCF	ENTREZGENE
PANTHER	GASTRULA ZINC FINGER PROTEIN XLCGF49.1-LIKE-RELATED	UniProtKB/TrEMBL
	TRANSCRIPTIONAL REPRESSOR CTCF	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 200	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A8C0MLG0_CANLF	UniProtKB/TrEMBL
	A0A8I3MWV8_CANLF	UniProtKB/TrEMBL
	A0A8I3N1R8_CANLF	UniProtKB/TrEMBL
	A0A8P0PMF4_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:39690	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM