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Gene: GRIPAP1 (GRIP1 associated protein 1) Canis lupus familiaris

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Symbol:

GRIPAP1

Name:

GRIP1 associated protein 1

RGD ID:

12058882

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of protein localization (ortholog); negative regulation of receptor clustering (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation type IIm (ortholog); epilepsy (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); presynaptic membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

GRIP1-associated protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	42,121,646 - 42,145,330 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	42,121,301 - 42,145,218 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,497,529 - 16,520,822 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	42,258,246 - 42,281,569 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	42,257,921 - 42,281,517 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	42,244,505 - 42,267,815 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	42,232,713 - 42,255,999 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	42,326,953 - 42,350,247 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

congenital disorder of glycosylation type IIm (ISO)

epilepsy (ISO)

immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ISO)

neurodegeneration with brain iron accumulation 5 (ISO)

Neurodevelopmental Disorders (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Thrombocytopenia 1 (ISO)

Wiskott-Aldrich syndrome (ISO)

X-linked epilepsy with variable learning disabilities and behavior disorders (ISO)

X-linked severe congenital neutropenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of protein localization (ISO)

negative regulation of receptor clustering (ISO)

regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane (IBA)

regulation of recycling endosome localization within postsynapse (IBA)

Cellular Component

cytosol (IEA)

dendrite (ISO)

extrinsic component of postsynaptic early endosome membrane (IBA)

glutamatergic synapse (IBA)

intracellular membrane-bounded organelle (IEA)

neuronal cell body (ISO)

nucleoplasm (IEA)

presynaptic membrane (ISO)

Schaffer collateral - CA1 synapse (ISO)

Molecular Function

guanyl-nucleotide exchange factor activity (ISO)

identical protein binding (IEA)

ionotropic glutamate receptor binding (ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

GRIPAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	42,121,646 - 42,145,330 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	42,121,301 - 42,145,218 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,497,529 - 16,520,822 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	42,258,246 - 42,281,569 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	42,257,921 - 42,281,517 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	42,244,505 - 42,267,815 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	42,232,713 - 42,255,999 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	42,326,953 - 42,350,247 (-)	NCBI		UU_Cfam_GSD_1.0

GRIPAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	48,973,723 - 49,002,264 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	48,973,720 - 49,002,265 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	48,830,134 - 48,858,675 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	48,715,078 - 48,743,619 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	48,589,582 - 48,614,923	NCBI
Celera	X	52,807,255 - 52,833,383 (+)	NCBI		Celera
Cytogenetic Map	X	p11.23	NCBI
HuRef	X	46,487,542 - 46,516,750 (-)	NCBI		HuRef
CHM1_1	X	48,861,436 - 48,889,990 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	48,384,190 - 48,412,744 (-)	NCBI		T2T-CHM13v2.0

Gripap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	7,656,009 - 7,686,805 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	7,656,004 - 7,686,806 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	7,789,961 - 7,820,567 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	7,789,765 - 7,820,567 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	7,367,121 - 7,397,689 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	6,946,954 - 6,977,522 (+)	NCBI		MGSCv36	mm8
Celera	X	3,649,702 - 3,680,935 (-)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	3.51	NCBI

Gripap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	17,350,817 - 17,380,626 (-)	NCBI		GRCr8
mRatBN7.2	X	14,678,896 - 14,708,747 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,678,898 - 14,708,679 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,492,440 - 19,522,378 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,560,734 - 20,590,671 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	16,825,905 - 16,855,840 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,523,929 - 15,553,702 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,523,929 - 15,553,720 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	16,305,164 - 16,334,935 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,713,439 - 26,743,461 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	26,766,907 - 26,796,928 (-)	NCBI
Celera	X	14,763,609 - 14,793,412 (-)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

Gripap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955543	500,340 - 527,267 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955543	500,340 - 527,243 (-)	NCBI	ChiLan1.0	ChiLan1.0

GRIPAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	50,463,524 - 50,492,167 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	50,466,901 - 50,495,545 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	41,271,762 - 41,300,327 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	49,128,760 - 49,157,059 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	49,128,760 - 49,157,059 (-)	Ensembl	panpan1.1		panPan2

Gripap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	34,652,314 - 34,676,582 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936721	891,824 - 916,984 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936721	892,704 - 916,965 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GRIPAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	43,043,029 - 43,070,364 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	43,043,613 - 43,070,363 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	47,897,905 - 47,917,864 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GRIPAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	46,093,225 - 46,120,097 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	46,091,584 - 46,120,097 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	11,578,935 - 11,606,742 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gripap1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624893	753,111 - 778,539 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624893	753,111 - 778,563 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GRIPAP1
98 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005641338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014111784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022415550	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038449960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038449961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038523421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038523422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038587378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038587379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038651891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038651892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_548991	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000024947 ⟹ ENSCAFP00000023148

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,830 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000024952 ⟹ ENSCAFP00000023153

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,830 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000073586 ⟹ ENSCAFP00000053793

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,301 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075664 ⟹ ENSCAFP00000050769

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,301 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000084649 ⟹ ENSCAFP00000048727

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,830 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000088480 ⟹ ENSCAFP00000043995

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,830 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000091238 ⟹ ENSCAFP00000057115

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	42,121,830 - 42,145,218 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845055134 ⟹ ENSCAFP00845043357

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	X	42,257,921 - 42,281,517 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845055139 ⟹ ENSCAFP00845043362

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	X	42,257,934 - 42,274,060 (-)	Ensembl

RefSeq Acc Id:

XM_005641338 ⟹ XP_005641395

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	X	42,121,646 - 42,138,205 (-)	NCBI
Dog10K_Boxer_Tasha	X	16,497,529 - 16,513,765 (-)	NCBI

Sequence:

show sequence

GACATCCTGGACTAGCAGCTTCTGGTAGGAGCCTGCCTGGGGTCTTGGATTACGACTATGAGGT
TGGCATCGGGCAAGCAGAAAATTCTCAATGTCCTCAATCCTCTGACTCTGCCACTTAACAGATA
GCTCTGCAGCCAGATGGAGCAGCTGGAGCGGGAGAACCAGCAACTGAAGGATGGAGCTGCCAGG
GCAGGCGCTGCCCCAGCCGGGAGTCTTGTGGATGGTGAGCTGCTGAGGCTGCAGGCAGAGAACA
CAGCCTTGCAGAAGAATGTGGCAGCCCTGCAAGAGCGCTATGGGAAAGAGGCTAGGAGATCCCA
ACCTGCCAGTGAGGGCCAAGGAGACCCCCCGGGGGGCCAAGCCTCCACCGTCCCAGCCCCCATG
CCATTGGCGGAAGTGGAGTTGAAGTGGGAAATGGAGAAGGAAGAAAAGAGATTGCTCTGGGAGC
AATTGCAAGGCTTGGAGAGCTCAAAGCAGGCTGAAACATCCAGACTACAGGAGGAGCTTGCTAA
GCTCTCTGAGAAACTGAAAAAGAAACAAGAAAGTTTCTGCCGTCTGCAGACAGAAAAGGAGACA
CTATTCAACGACAGCCGGAATAAGATTGAGGAGTTGCAGCAGAAGAAGGAAGCTGATCTCAAAG
CCCAGTTGGCTCGCACTCAGAAGCTGCAGCAAGAACTCGAAGCTGCCAATCAGAGCTTGGCGGA
ATTAAGAGATCAGTGGCAGGGGGAGCGCCTGGAGCATGCAGCAGCTCTGCGAGCCCTCCAAGAT
CAGGTATCCATCCAGAGTGCAGATGCACAAGAACAAGTGGAAGGACTTCTGGCTGAGAATAATG
CCTTGAGGACTAGCCTGGCTGCCCTGGAGCAGATCCAAACAGCAAAGACCCAAGAACTCAATAC
ACTCCGAGATGAGAATGCTGGGCTGGCAGCTGATTTGCAGCAGCGGCAGACTGAGTATGAGGAG
CTCATGGGACAGAAAGATGACCTCAACTCCCAATTGCAGGAGTCATTACGTGCCAATAGTCGGC
TCTTAGAACAGCTTCAAGAAATCGGGCAGGAGAAGGAGCAACTGACCCAGGAACTACAGGAGGC
TCGGAAGAGTGCCGAAAAGCGGAAGGCCATGCTGGATGAGCTGGCAATGGAGACACTGCAGGAG
AAGTCCCAGCACAAGGAAGAGCTGGGAGCCGTCCGACTGAGGCATGAGAAGGAGGTGCTGGGGG
TGCGTGCCCGCTATGAGCGCGAGCTCCGAGAGCTTCATGAAGACAAGAAGAGGCAGGAGGAGGA
ACTCCGTGGGCAGATTCGTGAGGAGAAGGCTCGAACACGAGAGTTGGAGAATCTCCAGCAAACG
GTGGAGGAACTTCAAGCTCAGGTACATTCTATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCC
TGAAGGAGGCCGAGGAATCTCTGCAGCAGCAGCAGCAGGATCAAGAGGAAGCCCTCAAGCAGTG
CCAGGAGCAGCACTCTGGCGAGCTGAAGAGCAAGGAAGAGGAGCTACAGGGCCTGCGGGATCAG
CTCCAGCAAGCCCAGGAGGAGCGGGACTGCCATCTGAAGACCATCAGCAACCTGAAACAGGAGG
TGAAGGACACAGTGGACGGGCAGCGGATCCTGGAAAAGAAGGGCAGTGCTGCGCTCAAGGACCT
CAAGCGGCAGCTACATCTGGAGCGGAAAAGGGCCGATAAGCTGCAGGAGCGGCTACAGGACATC
CTTACCAACAGCAAGAGCCGCTCTGGCCTTGAGGAGCTAGTTCTCTCAGAGATGAACTCACCCA
GCCGGACCCAGACTGGGGACAGCAGTAGCGTCTCGTCCTTCAGCTACCGGGAGATTTTGCGGGA
GAAGGAAAGCTCCACTGTTCCAGCCAGGTCCTTATCCAGCAGCCCTCAGGCCCAGCCTCCACGG
CCAGCAGAGCTGTCAGATGAGGAAGTGGCTGAGCTCTTTCAGCGCCTGGCAGAGACACAGCAAG
AGAAATGGATGCTGGAGGAGAAGGTGAAGCACCTGGAAGTGAGCAGTGCCTCCATGGCGGAGGA
CCTTTGCCGGAAGAGCGCCATCATTGAGACCTATGTCATGGACAGCCGGATTGATGTGTCCGTG
GCAGCAGGCCACACAGACCGCAGTGGGCTGGGCAGCGTTCTGAGAGACCTAGTGAAGCCAGGCG
ATGAGAACCTTCGGGAGATGAACAAGAAGCTACAGAACATGCTGGAGGAGCAACTCACCAAGAA
TATGCACTTGCACAAGGACATCGAAGTTCTCTCCCAGGAAATTGTGCGGCTCAGCAAGGAGTGC
GTGGGGTCCCCTGACCCAGACCTAGAACCGGGAGAAGCCAGCTAAAGACCTGCGGGCTGTACCT
GCTCCCTCCCCTCCCCACCCCCCAGGACACCATCCCCTTGGGCTGTGGTGGGAAAATGGGGCTG
CCACCAAAATCAAATAGGTTGGGAGACTGGACATTAAAGGGGTTGAAGGCCTGATGGCTGGTGT
TAGTGACCCTGTTTTAGGGCAGAAGCCCCTGGGGAGTGGGGATCCTGAGGGGAGGGGCAGGGAT
TTCTCGTCTTTCTTGGCCCTGGCTCCCAGAGGCTTTTGCCTTCATCTCTGCATGAACTCTCCCT
CCCCAGAGACCAACTGTTTTTTTTATTTTATTTTATTTTTTAATTTATGTCTGGAAGCCTGGCT
ACCCTGCATTTGGGATTGGGGATGTTGGGTGGGGCGCAGTCCGTGTTCAGCATTCTAACAACAT
GTGTGTGTATGTGTAAAGGCTGCAGCCAAAATACCATCTGGCCAGATGGGCCCACCCAC

hide sequence

RefSeq Acc Id:

XM_038449960 ⟹ XP_038305888

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	X	42,258,246 - 42,281,569 (-)	NCBI

RefSeq Acc Id:

XM_038449961 ⟹ XP_038305889

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	X	42,258,246 - 42,274,492 (-)	NCBI

RefSeq Acc Id:

XM_038523421 ⟹ XP_038379349

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	X	42,244,505 - 42,267,815 (-)	NCBI

RefSeq Acc Id:

XM_038523422 ⟹ XP_038379350

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	X	42,244,505 - 42,260,739 (-)	NCBI

RefSeq Acc Id:

XM_038587378 ⟹ XP_038443306

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	X	42,326,953 - 42,350,247 (-)	NCBI

RefSeq Acc Id:

XM_038587379 ⟹ XP_038443307

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	X	42,326,953 - 42,343,190 (-)	NCBI

RefSeq Acc Id:

XM_038651891 ⟹ XP_038507819

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	X	42,232,713 - 42,255,999 (-)	NCBI

RefSeq Acc Id:

XM_038651892 ⟹ XP_038507820

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	X	42,232,713 - 42,248,947 (-)	NCBI

RefSeq Acc Id:

XM_548991 ⟹ XP_548991

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	X	42,121,646 - 42,145,327 (-)	NCBI
Dog10K_Boxer_Tasha	X	16,497,529 - 16,520,822 (-)	NCBI

Sequence:

show sequence

TCTGGAGTAGACTCCTTCCCCTCCATTCCTGGCCAGTGGTTTGATCCGCCCCGAATCCTGACAG
GAGGGACGAACTGCGTCTGCGCAGAAGGCTGTCGGGGGGGGGGGTGGGGGAGGAACATGGCGCA
AGCTCTGTCTGAGGAGGAGTTTCAGCGGATGCAGGCTCAGCTCCTGGAGCTCCGAACAAATAAC
TATCAGCTTTCAGATGAACTACGCAAGAATGGCGTTGAGCTTACCAGTCTTCGACAGAAGGTCG
CCTACCTGGATAAGGAGTTCAGCAAAGCTCAGAAGGCACTGAGCAAGAGCAAGAAAGCTCAGGA
AGTCGAGGGGCTGCTGAGTGAAAATGAGATGCTGCAGGCAAAGCTTCACAGCCAAGAGGAGGAC
TTTCGTTTGCAGAACAGCACGCTTATGGCAGAGTTCAGCAAGCTCTGCAGCCAGATGGAGCAGC
TGGAGCGGGAGAACCAGCAACTGAAGGATGGAGCTGCCAGGGCAGGCGCTGCCCCAGCCGGGAG
TCTTGTGGATGGTGAGCTGCTGAGGCTGCAGGCAGAGAACACAGCCTTGCAGAAGAATGTGGCA
GCCCTGCAAGAGCGCTATGGGAAAGAGGCTAGGAGATCCCAACCTGCCAGTGAGGGCCAAGGAG
ACCCCCCGGGGGGCCAAGCCTCCACCGTCCCAGCCCCCATGCCATTGGCGGAAGTGGAGTTGAA
GTGGGAAATGGAGAAGGAAGAAAAGAGATTGCTCTGGGAGCAATTGCAAGGCTTGGAGAGCTCA
AAGCAGGCTGAAACATCCAGACTACAGGAGGAGCTTGCTAAGCTCTCTGAGAAACTGAAAAAGA
AACAAGAAAGTTTCTGCCGTCTGCAGACAGAAAAGGAGACACTATTCAACGACAGCCGGAATAA
GATTGAGGAGTTGCAGCAGAAGAAGGAAGCTGATCTCAAAGCCCAGTTGGCTCGCACTCAGAAG
CTGCAGCAAGAACTCGAAGCTGCCAATCAGAGCTTGGCGGAATTAAGAGATCAGTGGCAGGGGG
AGCGCCTGGAGCATGCAGCAGCTCTGCGAGCCCTCCAAGATCAGGTATCCATCCAGAGTGCAGA
TGCACAAGAACAAGTGGAAGGACTTCTGGCTGAGAATAATGCCTTGAGGACTAGCCTGGCTGCC
CTGGAGCAGATCCAAACAGCAAAGACCCAAGAACTCAATACACTCCGAGATGAGAATGCTGGGC
TGGCAGCTGATTTGCAGCAGCGGCAGACTGAGTATGAGGAGCTCATGGGACAGAAAGATGACCT
CAACTCCCAATTGCAGGAGTCATTACGTGCCAATAGTCGGCTCTTAGAACAGCTTCAAGAAATC
GGGCAGGAGAAGGAGCAACTGACCCAGGAACTACAGGAGGCTCGGAAGAGTGCCGAAAAGCGGA
AGGCCATGCTGGATGAGCTGGCAATGGAGACACTGCAGGAGAAGTCCCAGCACAAGGAAGAGCT
GGGAGCCGTCCGACTGAGGCATGAGAAGGAGGTGCTGGGGGTGCGTGCCCGCTATGAGCGCGAG
CTCCGAGAGCTTCATGAAGACAAGAAGAGGCAGGAGGAGGAACTCCGTGGGCAGATTCGTGAGG
AGAAGGCTCGAACACGAGAGTTGGAGAATCTCCAGCAAACGGTGGAGGAACTTCAAGCTCAGGT
ACATTCTATGGATGGAGCCAAGGGCTGGTTTGAACGGCGCCTGAAGGAGGCCGAGGAATCTCTG
CAGCAGCAGCAGCAGGATCAAGAGGAAGCCCTCAAGCAGTGCCAGGAGCAGCACTCTGGCGAGC
TGAAGAGCAAGGAAGAGGAGCTACAGGGCCTGCGGGATCAGCTCCAGCAAGCCCAGGAGGAGCG
GGACTGCCATCTGAAGACCATCAGCAACCTGAAACAGGAGGTGAAGGACACAGTGGACGGGCAG
CGGATCCTGGAAAAGAAGGGCAGTGCTGCGCTCAAGGACCTCAAGCGGCAGCTACATCTGGAGC
GGAAAAGGGCCGATAAGCTGCAGGAGCGGCTACAGGACATCCTTACCAACAGCAAGAGCCGCTC
TGGCCTTGAGGAGCTAGTTCTCTCAGAGATGAACTCACCCAGCCGGACCCAGACTGGGGACAGC
AGTAGCGTCTCGTCCTTCAGCTACCGGGAGATTTTGCGGGAGAAGGAAAGCTCCACTGTTCCAG
CCAGGTCCTTATCCAGCAGCCCTCAGGCCCAGCCTCCACGGCCAGCAGAGCTGTCAGATGAGGA
AGTGGCTGAGCTCTTTCAGCGCCTGGCAGAGACACAGCAAGAGAAATGGATGCTGGAGGAGAAG
GTGAAGCACCTGGAAGTGAGCAGTGCCTCCATGGCGGAGGACCTTTGCCGGAAGAGCGCCATCA
TTGAGACCTATGTCATGGACAGCCGGATTGATGTGTCCGTGGCAGCAGGCCACACAGACCGCAG
TGGGCTGGGCAGCGTTCTGAGAGACCTAGTGAAGCCAGGCGATGAGAACCTTCGGGAGATGAAC
AAGAAGCTACAGAACATGCTGGAGGAGCAACTCACCAAGAATATGCACTTGCACAAGGACATCG
AAGTTCTCTCCCAGGAAATTGTGCGGCTCAGCAAGGAGTGCGTGGGGTCCCCTGACCCAGACCT
AGAACCGGGAGAAGCCAGCTAAAGACCTGCGGGCTGTACCTGCTCCCTCCCCTCCCCACCCCCC
AGGACACCATCCCCTTGGGCTGTGGTGGGAAAATGGGGCTGCCACCAAAATCAAATAGGTTGGG
AGACTGGACATTAAAGGGGTTGAAGGCCTGATGGCTGGTGTTAGTGACCCTGTTTTAGGGCAGA
AGCCCCTGGGGAGTGGGGATCCTGAGGGGAGGGGCAGGGATTTCTCGTCTTTCTTGGCCCTGGC
TCCCAGAGGCTTTTGCCTTCATCTCTGCATGAACTCTCCCTCCCCAGAGACCAACTGTTTTTTT
TATTTTATTTTATTTTTTAATTTATGTCTGGAAGCCTGGCTACCCTGCATTTGGGATTGGGGAT
GTTGGGTGGGGCGCAGTCCGTGTTCAGCATTCTAACAACATGTGTGTGTATGTGTAAAGGCTGC
AGCCAAAATACCATCTGGCCAGATGGGCCCACCCAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005641395	(Get FASTA)	NCBI Sequence Viewer
	XP_038305888	(Get FASTA)	NCBI Sequence Viewer
	XP_038305889	(Get FASTA)	NCBI Sequence Viewer
	XP_038379349	(Get FASTA)	NCBI Sequence Viewer
	XP_038379350	(Get FASTA)	NCBI Sequence Viewer
	XP_038443306	(Get FASTA)	NCBI Sequence Viewer
	XP_038443307	(Get FASTA)	NCBI Sequence Viewer
	XP_038507819	(Get FASTA)	NCBI Sequence Viewer
	XP_038507820	(Get FASTA)	NCBI Sequence Viewer
	XP_548991	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000023148.5
	ENSCAFP00000023153.3
	ENSCAFP00000043995.1
	ENSCAFP00000048727.2
	ENSCAFP00040016866.1
	ENSCAFP00040017006.1
	ENSCAFP00040017065.1
	ENSCAFP00040017114.1
	ENSCAFP00845043357
	ENSCAFP00845043357.1
	ENSCAFP00845043362
	ENSCAFP00845043362.1

RefSeq Acc Id:	XP_548991 ⟸ XM_548991
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L7G7 (UniProtKB/TrEMBL), A0A8C0S6Z3 (UniProtKB/TrEMBL), A0A8P0SKA6 (UniProtKB/TrEMBL), A0A8C0S7C3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAQALSEEEFQRMQAQLLELRTNNYQLSDELRKNGVELTSLRQKVAYLDKEFSKAQKALSKSKK AQEVEGLLSENEMLQAKLHSQEEDFRLQNSTLMAEFSKLCSQMEQLERENQQLKDGAARAGAAP AGSLVDGELLRLQAENTALQKNVAALQERYGKEARRSQPASEGQGDPPGGQASTVPAPMPLAEV ELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAKLSEKLKKKQESFCRLQTEKETLFNDS RNKIEELQQKKEADLKAQLARTQKLQQELEAANQSLAELRDQWQGERLEHAAALRALQDQVSIQ SADAQEQVEGLLAENNALRTSLAALEQIQTAKTQELNTLRDENAGLAADLQQRQTEYEELMGQK DDLNSQLQESLRANSRLLEQLQEIGQEKEQLTQELQEARKSAEKRKAMLDELAMETLQEKSQHK EELGAVRLRHEKEVLGVRARYERELRELHEDKKRQEEELRGQIREEKARTRELENLQQTVEELQ AQVHSMDGAKGWFERRLKEAEESLQQQQQDQEEALKQCQEQHSGELKSKEEELQGLRDQLQQAQ EERDCHLKTISNLKQEVKDTVDGQRILEKKGSAALKDLKRQLHLERKRADKLQERLQDILTNSK SRSGLEELVLSEMNSPSRTQTGDSSSVSSFSYREILREKESSTVPARSLSSSPQAQPPRPAELS DEEVAELFQRLAETQQEKWMLEEKVKHLEVSSASMAEDLCRKSAIIETYVMDSRIDVSVAAGHT DRSGLGSVLRDLVKPGDENLREMNKKLQNMLEEQLTKNMHLHKDIEVLSQEIVRLSKECVGSPD PDLEPGEAS hide sequence

RefSeq Acc Id:	XP_005641395 ⟸ XM_005641338
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0S7J9 (UniProtKB/TrEMBL), A0A8P0NUE4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEQLERENQQLKDGAARAGAAPAGSLVDGELLRLQAENTALQKNVAALQERYGKEARRSQPASE GQGDPPGGQASTVPAPMPLAEVELKWEMEKEEKRLLWEQLQGLESSKQAETSRLQEELAKLSEK LKKKQESFCRLQTEKETLFNDSRNKIEELQQKKEADLKAQLARTQKLQQELEAANQSLAELRDQ WQGERLEHAAALRALQDQVSIQSADAQEQVEGLLAENNALRTSLAALEQIQTAKTQELNTLRDE NAGLAADLQQRQTEYEELMGQKDDLNSQLQESLRANSRLLEQLQEIGQEKEQLTQELQEARKSA EKRKAMLDELAMETLQEKSQHKEELGAVRLRHEKEVLGVRARYERELRELHEDKKRQEEELRGQ IREEKARTRELENLQQTVEELQAQVHSMDGAKGWFERRLKEAEESLQQQQQDQEEALKQCQEQH SGELKSKEEELQGLRDQLQQAQEERDCHLKTISNLKQEVKDTVDGQRILEKKGSAALKDLKRQL HLERKRADKLQERLQDILTNSKSRSGLEELVLSEMNSPSRTQTGDSSSVSSFSYREILREKESS TVPARSLSSSPQAQPPRPAELSDEEVAELFQRLAETQQEKWMLEEKVKHLEVSSASMAEDLCRK SAIIETYVMDSRIDVSVAAGHTDRSGLGSVLRDLVKPGDENLREMNKKLQNMLEEQLTKNMHLH KDIEVLSQEIVRLSKECVGSPDPDLEPGEAS hide sequence

Ensembl Acc Id:

ENSCAFP00000043995 ⟸ ENSCAFT00000088480

Ensembl Acc Id:

ENSCAFP00000048727 ⟸ ENSCAFT00000084649

Ensembl Acc Id:

ENSCAFP00000053793 ⟸ ENSCAFT00000073586

Ensembl Acc Id:

ENSCAFP00000023153 ⟸ ENSCAFT00000024952

Ensembl Acc Id:

ENSCAFP00000023148 ⟸ ENSCAFT00000024947

Ensembl Acc Id:

ENSCAFP00000057115 ⟸ ENSCAFT00000091238

Ensembl Acc Id:

ENSCAFP00000050769 ⟸ ENSCAFT00000075664

RefSeq Acc Id:	XP_038379349 ⟸ XM_038523421
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038379350 ⟸ XM_038523422
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038507819 ⟸ XM_038651891
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038507820 ⟸ XM_038651892
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038305888 ⟸ XM_038449960
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L7G7 (UniProtKB/TrEMBL), A0A8C0S6Z3 (UniProtKB/TrEMBL), A0A8P0SKA6 (UniProtKB/TrEMBL), A0A8C0S7C3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038305889 ⟸ XM_038449961
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0S7J9 (UniProtKB/TrEMBL), A0A8P0NUE4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038443306 ⟸ XM_038587378
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L7G7 (UniProtKB/TrEMBL), A0A8C0S6Z3 (UniProtKB/TrEMBL), A0A8C0S7C3 (UniProtKB/TrEMBL), A0A8P0SKA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038443307 ⟸ XM_038587379
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0S7J9 (UniProtKB/TrEMBL), A0A8P0NUE4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845043357 ⟸ ENSCAFT00845055134

Ensembl Acc Id:

ENSCAFP00845043362 ⟸ ENSCAFT00845055139

Promoters

RGD ID:

13689319

Promoter ID:

EPDNEW_C7387

Type:

single initiation site

Name:

GRIPAP1_1

Description:

GRIP1 associated protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	X	42,145,213 - 42,145,273	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000015744	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040010451	UniProtKB/TrEMBL
	ENSCAFG00845031014	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000024947.5	UniProtKB/TrEMBL
	ENSCAFT00000024952.6	UniProtKB/TrEMBL
	ENSCAFT00000084649.2	UniProtKB/TrEMBL
	ENSCAFT00000088480.2	UniProtKB/TrEMBL
	ENSCAFT00040019427.1	UniProtKB/TrEMBL
	ENSCAFT00040019587.1	UniProtKB/TrEMBL
	ENSCAFT00040019659.1	UniProtKB/TrEMBL
	ENSCAFT00040019720.1	UniProtKB/TrEMBL
	ENSCAFT00845055134	ENTREZGENE
	ENSCAFT00845055134.1	UniProtKB/TrEMBL
	ENSCAFT00845055139	ENTREZGENE
	ENSCAFT00845055139.1	UniProtKB/TrEMBL
InterPro	GRIPAP1	UniProtKB/TrEMBL
NCBI Gene	GRIPAP1	ENTREZGENE
PANTHER	GRIP1-ASSOCIATED PROTEIN 1	UniProtKB/TrEMBL
	PTHR18978	UniProtKB/TrEMBL
UniProt	A0A8C0L7G7	ENTREZGENE
	A0A8C0S6Z3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S7C3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S7J9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S7N9_CANLF	UniProtKB/TrEMBL
	A0A8I3Q8F1_CANLF	UniProtKB/TrEMBL
	A0A8I3SCW8_CANLF	UniProtKB/TrEMBL
	A0A8P0NUE4	ENTREZGENE
	A0A8P0NYR3_CANLF	UniProtKB/TrEMBL
	A0A8P0SK30_CANLF	UniProtKB/TrEMBL
	A0A8P0SKA6	ENTREZGENE
UniProt Secondary	A0A8P0NUE4	UniProtKB/TrEMBL
	A0A8P0SKA6	UniProtKB/TrEMBL
VGNC ID	VGNC:41500	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar