RHBG (Rh family B glycoprotein) - Rat Genome Database

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Gene: RHBG (Rh family B glycoprotein) Pan paniscus
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Symbol: RHBG
Name: Rh family B glycoprotein
RGD ID: 12045680
Description: ENCODES a protein that exhibits ammonium channel activity (inferred); ankyrin binding (inferred); carbon dioxide transmembrane transporter activity (inferred); INVOLVED IN ammonium homeostasis (inferred); ammonium transmembrane transport (inferred); carbon dioxide transmembrane transport (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); gastrointestinal stromal tumor (ortholog); immunodeficiency 42 (ortholog); FOUND IN basolateral plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ammonium transporter Rh type B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2193,459,426 - 93,482,772 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1193,191,342 - 93,214,685 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01131,710,282 - 131,728,487 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11135,538,513 - 135,555,805 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1135,538,519 - 135,555,803 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RHBG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2193,459,426 - 93,482,772 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1193,191,342 - 93,214,685 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01131,710,282 - 131,728,487 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11135,538,513 - 135,555,805 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1135,538,519 - 135,555,803 (+)Ensemblpanpan1.1panPan2
RHBG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381156,369,211 - 156,385,219 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1156,369,211 - 156,385,219 (+)EnsemblGRCh38hg38GRCh38
GRCh371156,339,002 - 156,355,011 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361154,605,627 - 154,621,635 (+)NCBINCBI36Build 36hg18NCBI36
Build 341153,152,075 - 153,168,082NCBI
Celera1129,411,936 - 129,427,944 (+)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1127,699,264 - 127,715,166 (+)NCBIHuRef
CHM1_11157,735,330 - 157,751,369 (+)NCBICHM1_1
T2T-CHM13v2.01155,507,822 - 155,523,825 (+)NCBIT2T-CHM13v2.0
Rhbg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39388,150,181 - 88,162,046 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl388,150,181 - 88,162,016 (-)EnsemblGRCm39 Ensembl
GRCm38388,242,874 - 88,254,739 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl388,242,874 - 88,254,709 (-)EnsemblGRCm38mm10GRCm38
MGSCv37388,046,796 - 88,058,606 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36388,328,801 - 88,340,611 (-)NCBIMGSCv36mm8
Celera388,282,453 - 88,294,263 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.78NCBI
Rhbg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,002,886 - 176,015,201 (-)NCBIGRCr8
mRatBN7.22173,704,852 - 173,717,380 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2173,704,562 - 173,717,321 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2180,850,109 - 180,862,373 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02178,872,464 - 178,884,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02173,472,192 - 173,484,457 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02187,610,081 - 187,622,408 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2187,610,087 - 187,622,373 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,013,098 - 207,028,671 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,320,787 - 180,333,050 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12180,270,893 - 180,283,156 (-)NCBI
Celera2167,651,447 - 167,663,638 (-)NCBICelera
Cytogenetic Map2q34NCBI
Rhbg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555452,490,924 - 2,504,085 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555452,491,417 - 2,504,013 (+)NCBIChiLan1.0ChiLan1.0
TSACC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1741,557,977 - 41,566,581 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl741,538,214 - 41,566,057 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha741,046,147 - 41,054,729 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0741,422,692 - 41,431,296 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1741,204,114 - 41,212,703 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0741,257,320 - 41,265,905 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0741,541,399 - 41,549,956 (-)NCBIUU_Cfam_GSD_1.0
Rhbg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505826,545,465 - 26,559,681 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365805,575,866 - 5,590,062 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365805,575,867 - 5,590,061 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RHBG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl493,694,266 - 93,707,865 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1493,694,259 - 93,708,055 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24102,509,894 - 102,511,016 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RHBG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1207,475,404 - 7,493,109 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl207,475,438 - 7,492,629 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660386,775,594 - 6,793,408 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rhbg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248851,616,060 - 1,628,933 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248851,616,331 - 1,628,349 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000042203   ⟹   ENSPPAP00000019440
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1135,538,519 - 135,555,803 (+)Ensembl
RefSeq Acc Id: XM_003821060   ⟹   XP_003821108
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2193,459,913 - 93,478,839 (-)NCBI
NHGRI_mPanPan1193,191,829 - 93,210,752 (-)NCBI
Mhudiblu_PPA_v01131,710,282 - 131,728,323 (+)NCBI
PanPan1.11135,538,519 - 135,555,803 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055113115   ⟹   XP_054969090
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2193,459,426 - 93,482,772 (-)NCBI
NHGRI_mPanPan1193,191,342 - 93,214,685 (-)NCBI
RefSeq Acc Id: XM_055113116   ⟹   XP_054969091
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2193,459,913 - 93,478,835 (-)NCBI
NHGRI_mPanPan1193,191,829 - 93,210,748 (-)NCBI
RefSeq Acc Id: XM_055113117   ⟹   XP_054969092
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2193,459,913 - 93,477,373 (-)NCBI
NHGRI_mPanPan1193,191,829 - 93,209,137 (-)NCBI
RefSeq Acc Id: XM_057302432   ⟹   XP_057158415
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2193,460,552 - 93,472,669 (-)NCBI
NHGRI_mPanPan1193,192,468 - 93,202,478 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003821108 (Get FASTA)   NCBI Sequence Viewer  
  XP_054969090 (Get FASTA)   NCBI Sequence Viewer  
  XP_054969091 (Get FASTA)   NCBI Sequence Viewer  
  XP_054969092 (Get FASTA)   NCBI Sequence Viewer  
  XP_057158415 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000019440.1
RefSeq Acc Id: XP_003821108   ⟸   XM_003821060
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AUJ4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000019440   ⟸   ENSPPAT00000042203
RefSeq Acc Id: XP_054969090   ⟸   XM_055113115
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AUJ4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054969091   ⟸   XM_055113116
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AUJ4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054969092   ⟸   XM_055113117
- Peptide Label: isoform X5
RefSeq Acc Id: XP_057158415   ⟸   XM_057302432
- Peptide Label: isoform X4

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000032922 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000042203.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.3430.10 UniProtKB/TrEMBL
InterPro Ammonium/urea_transptr UniProtKB/TrEMBL
  NH4_transpt_AmtB-like_dom UniProtKB/TrEMBL
  RhesusRHD UniProtKB/TrEMBL
KEGG Report pps:100977141 UniProtKB/TrEMBL
NCBI Gene RHBG ENTREZGENE
PANTHER AMMONIUM TRANSPORTER UniProtKB/TrEMBL
  AMMONIUM TRANSPORTER RH TYPE B UniProtKB/TrEMBL
Pfam Ammonium_transp UniProtKB/TrEMBL
PRINTS RHESUSRHD UniProtKB/TrEMBL
Superfamily-SCOP Ammonium transporter UniProtKB/TrEMBL
UniProt A0A2R9AUJ4 ENTREZGENE, UniProtKB/TrEMBL