MIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 37,876,677 - 37,882,145 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 37,873,442 - 37,878,910 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 32,459,965 - 32,465,465 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 32,713,470 - 32,718,026 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 32,713,470 - 32,718,026 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 56,449,502 - 56,456,553 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 56,449,502 - 56,469,166 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 56,843,286 - 56,848,441 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 55,130,151 - 55,134,696 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 55,131,148 - 55,134,709 | NCBI | | | | | Celera | 12 | 56,496,656 - 56,501,806 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.3 | NCBI | | | | | HuRef | 12 | 53,882,327 - 53,887,476 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 56,810,895 - 56,816,045 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 56,417,213 - 56,424,265 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 128,061,679 - 128,067,681 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 128,061,707 - 128,067,681 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 128,225,810 - 128,231,812 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 128,225,838 - 128,231,812 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 127,662,894 - 127,668,867 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 127,628,787 - 127,634,760 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 133,261,918 - 133,267,869 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | D3 | NCBI | | | | | cM Map | 10 | 76.49 | NCBI | | | | |
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Mip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 1,228,089 - 1,237,707 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 643,502 - 653,121 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 647,315 - 654,400 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 3,405,806 - 3,411,610 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 5,281,813 - 5,287,615 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 5,583,723 - 5,589,495 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 2,635,743 - 2,642,995 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 2,635,743 - 2,642,848 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 2,614,619 - 2,621,871 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 1,509,023 - 1,516,275 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 1,509,073 - 1,514,815 (+) | NCBI | | | | | Celera | 7 | 525,859 - 533,134 (+) | NCBI | | Celera | | | RH 3.4 Map | 10 | 194.71 | RGD | | | | | Cytogenetic Map | 7 | q11 | NCBI | | | | |
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Mip (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955458 | 4,030,619 - 4,035,656 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955458 | 4,030,619 - 4,035,656 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 10 | 701,385 - 707,005 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 701,387 - 706,151 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 764,593 - 769,360 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 710,356 - 715,983 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 710,358 - 715,134 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 687,429 - 692,195 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 930,541 - 935,310 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 1,054,262 - 1,059,027 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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MIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 21,787,826 - 21,793,592 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 21,789,040 - 21,804,964 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 23,334,531 - 23,339,133 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MIP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 52,409,592 - 52,415,752 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 52,410,325 - 52,413,933 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 193,568,279 - 193,573,741 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mip (Heterocephalus glaber - naked mole-rat) |
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