PRTN3 (proteinase 3) - Rat Genome Database

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Gene: PRTN3 (proteinase 3) Pan paniscus
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Symbol: PRTN3
Name: proteinase 3
RGD ID: 12013992
Description: ENCODES a protein that exhibits enzyme binding (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell-cell junction maintenance (ortholog); mature conventional dendritic cell differentiation (ortholog); membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH chronic myeloid leukemia (ortholog); granulomatosis with polyangiitis (ortholog); FOUND IN azurophil granule lumen (ortholog); cytosol (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100990852; myeloblastin; myeloblastin-like
RGD Orthologs
Human
Mouse
Rat
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2205,171,167 - 5,180,414 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,409,659 - 4,418,867 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v019283,314 - 291,504 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.119810,237 - 817,588 (+)NCBIPanPan1.1PanPan1.1panPan2
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PRTN3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2205,171,167 - 5,180,414 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1194,409,659 - 4,418,867 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v019283,314 - 291,504 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.119810,237 - 817,588 (+)NCBIPanPan1.1PanPan1.1panPan2
PRTN3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3819840,999 - 848,175 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl19840,999 - 848,175 (+)Ensemblhg38GRCh38
GRCh3719840,999 - 848,175 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3619791,985 - 799,175 (+)NCBIBuild 36Build 36hg18NCBI36
Build 3419791,964 - 799,051NCBI
Celera19766,135 - 773,326 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef19610,181 - 617,038 (+)NCBIHuRef
CHM1_119840,583 - 847,665 (+)NCBICHM1_1
T2T-CHM13v2.019796,963 - 804,283 (+)NCBIT2T-CHM13v2.0
Prtn3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391079,715,499 - 79,719,008 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1079,710,310 - 79,719,008 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381079,879,667 - 79,883,174 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1079,874,476 - 79,883,174 (+)Ensemblmm10GRCm38
MGSCv371079,342,412 - 79,345,919 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361079,282,796 - 79,286,303 (+)NCBIMGSCv36mm8
Celera1080,894,480 - 80,897,987 (+)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Prtn3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8710,472,750 - 10,482,037 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl710,472,755 - 10,482,474 (-)EnsemblGRCr8
mRatBN7.279,822,123 - 9,831,300 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl79,822,122 - 9,831,944 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx712,702,828 - 12,706,274 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0714,580,909 - 14,584,355 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0712,440,584 - 12,444,030 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0712,643,712 - 12,646,951 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,643,516 - 12,646,960 (-)Ensemblrn6Rnor6.0
Rnor_5.0712,813,238 - 12,822,399 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4711,334,722 - 11,338,559 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera77,997,078 - 8,000,317 (-)NCBICelera
RGSC_v3.1711,334,722 - 11,338,559 (-)NCBI
Cytogenetic Map7q11NCBI
PRTN3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl277,520,314 - 77,523,563 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1277,520,314 - 77,526,303 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2277,472,358 - 77,477,327 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRTN3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.16590,193 - 598,829 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660818,318,743 - 8,324,146 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034945505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_034945505   ⟹   XP_034801396
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2205,171,167 - 5,180,414 (+)NCBI
NHGRI_mPanPan1194,409,659 - 4,418,867 (+)NCBI
Mhudiblu_PPA_v019283,314 - 291,504 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034801396 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00050015149
RefSeq Acc Id: XP_034801396   ⟸   XM_034945505


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00050011622 ENTREZGENE
Ensembl Transcript ENSPPAT00050024361 ENTREZGENE
NCBI Gene PRTN3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 PRTN3  proteinase 3  LOC100990852  myeloblastin-like  Data merged from RGD:11953415 737654 PROVISIONAL