ADAM29 (ADAM metallopeptidase domain 29) - Rat Genome Database

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Gene: ADAM29 (ADAM metallopeptidase domain 29) Pan paniscus
Analyze
Symbol: ADAM29
Name: ADAM metallopeptidase domain 29
RGD ID: 11976992
Description: ENCODES a protein that exhibits metal ion binding (inferred); metalloendopeptidase activity (inferred); INVOLVED IN male gonad development (inferred); proteolysis (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN external side of plasma membrane (inferred); membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: disintegrin and metalloproteinase domain-containing protein 29
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23172,666,680 - 172,727,706 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14173,046,705 - 173,107,718 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04167,133,174 - 167,194,160 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14179,368,671 - 179,428,753 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4179,426,082 - 179,428,753 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ADAM29
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23172,666,680 - 172,727,706 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14173,046,705 - 173,107,718 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04167,133,174 - 167,194,160 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14179,368,671 - 179,428,753 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4179,426,082 - 179,428,753 (+)Ensemblpanpan1.1panPan2
ADAM29
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384174,918,358 - 174,978,180 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4174,829,668 - 174,978,180 (+)EnsemblGRCh38hg38GRCh38
GRCh374175,839,509 - 175,899,331 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364176,076,134 - 176,135,906 (+)NCBINCBI36Build 36hg18NCBI36
Build 344176,271,406 - 176,273,692NCBI
Celera4173,168,616 - 173,228,548 (+)NCBICelera
Cytogenetic Map4q34.1NCBI
HuRef4171,588,769 - 171,648,620 (+)NCBIHuRef
CHM1_14175,815,949 - 175,875,773 (+)NCBICHM1_1
T2T-CHM13v2.04178,256,372 - 178,316,203 (+)NCBIT2T-CHM13v2.0
Adam29
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39856,323,947 - 56,359,999 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl856,323,947 - 56,359,983 (-)EnsemblGRCm39 Ensembl
GRCm38855,870,912 - 55,906,964 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl855,870,912 - 55,906,948 (-)EnsemblGRCm38mm10GRCm38
MGSCv37858,349,709 - 58,385,761 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36858,763,054 - 58,799,090 (-)NCBIMGSCv36mm8
Celera858,527,430 - 58,566,352 (-)NCBICelera
Cytogenetic Map8B2NCBI
cM Map829.68NCBI
Adam24
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81658,281,748 - 58,287,735 (-)NCBIGRCr8
mRatBN7.21651,578,278 - 51,584,265 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,578,277 - 51,584,312 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01654,625,789 - 54,631,824 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,625,847 - 54,628,458 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01654,333,065 - 54,339,049 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41654,916,429 - 54,918,651 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11654,916,503 - 54,918,726 (-)NCBI
Celera1649,470,643 - 49,476,678 (-)NCBICelera
Cytogenetic Map16q12.1NCBI
Adam29
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540332,233,949 - 32,236,375 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540332,233,940 - 32,257,782 (-)NCBIChiLan1.0ChiLan1.0
ADAM29
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12525,372,342 - 25,442,760 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2526,024,913 - 26,095,792 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02525,536,308 - 25,607,243 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2525,604,567 - 25,607,212 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12525,470,229 - 25,540,838 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02525,373,125 - 25,443,529 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02525,524,740 - 25,595,635 (+)NCBIUU_Cfam_GSD_1.0
ADAM29
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11415,302,879 - 15,307,649 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21416,491,921 - 16,530,014 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADAM29
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17121,006,675 - 121,053,292 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037101,073,375 - 101,127,006 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adam29
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247696,491,682 - 6,509,400 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000015921   ⟹   ENSPPAP00000003454
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4179,426,082 - 179,428,753 (+)Ensembl
RefSeq Acc Id: XM_008977077   ⟹   XP_008975325
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23172,666,680 - 172,727,702 (+)NCBI
NHGRI_mPanPan14173,046,705 - 173,107,714 (+)NCBI
Mhudiblu_PPA_v04167,133,174 - 167,194,160 (+)NCBI
PanPan1.14179,368,671 - 179,428,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034959438   ⟹   XP_034815329
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23172,666,680 - 172,727,706 (+)NCBI
NHGRI_mPanPan14173,046,705 - 173,107,718 (+)NCBI
Mhudiblu_PPA_v04167,133,174 - 167,194,160 (+)NCBI
RefSeq Acc Id: XM_055112017   ⟹   XP_054967992
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23172,666,680 - 172,727,701 (+)NCBI
NHGRI_mPanPan14173,046,705 - 173,107,713 (+)NCBI
RefSeq Acc Id: XM_055112018   ⟹   XP_054967993
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23172,666,680 - 172,727,695 (+)NCBI
NHGRI_mPanPan14173,046,705 - 173,107,707 (+)NCBI
RefSeq Acc Id: XM_055112019   ⟹   XP_054967994
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v23172,715,265 - 172,727,695 (+)NCBI
NHGRI_mPanPan14173,095,270 - 173,107,707 (+)NCBI
Protein Sequences
Protein RefSeqs XP_008975325 (Get FASTA)   NCBI Sequence Viewer  
  XP_034815329 (Get FASTA)   NCBI Sequence Viewer  
  XP_054967992 (Get FASTA)   NCBI Sequence Viewer  
  XP_054967993 (Get FASTA)   NCBI Sequence Viewer  
  XP_054967994 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000003454.1
RefSeq Acc Id: XP_008975325   ⟸   XM_008977077
- UniProtKB: A0A2R8ZF26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034815329   ⟸   XM_034959438
- UniProtKB: A0A2R8ZF26 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000003454   ⟸   ENSPPAT00000015921
RefSeq Acc Id: XP_054967992   ⟸   XM_055112017
- UniProtKB: A0A2R8ZF26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054967993   ⟸   XM_055112018
- UniProtKB: A0A2R8ZF26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054967994   ⟸   XM_055112019
- UniProtKB: A0A2R8ZF26 (UniProtKB/TrEMBL)
Protein Domains
Disintegrin   Peptidase M12B


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000014578 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000015921.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.390.10 UniProtKB/TrEMBL
  4.10.70.10 UniProtKB/TrEMBL
InterPro ADAM_Cys-rich UniProtKB/TrEMBL
  Disintegrin_CS UniProtKB/TrEMBL
  Disintegrin_dom UniProtKB/TrEMBL
  Disintegrin_dom_sf UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Peptidase_M12B UniProtKB/TrEMBL
  Peptidase_M12B_N UniProtKB/TrEMBL
  Reprolysin_adamalysin UniProtKB/TrEMBL
NCBI Gene ADAM29 ENTREZGENE
PANTHER ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN UniProtKB/TrEMBL
  DISINTEGRIN AND METALLOPROTEINASE DOMAIN-CONTAINING PROTEIN 29 UniProtKB/TrEMBL
Pfam ADAM_CR UniProtKB/TrEMBL
  Disintegrin UniProtKB/TrEMBL
  Pep_M12B_propep UniProtKB/TrEMBL
  Reprolysin UniProtKB/TrEMBL
PRINTS DISINTEGRIN UniProtKB/TrEMBL
PROSITE ADAM_MEPRO UniProtKB/TrEMBL
  DISINTEGRIN_1 UniProtKB/TrEMBL
  DISINTEGRIN_2 UniProtKB/TrEMBL
  PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
SMART ACR UniProtKB/TrEMBL
  DISIN UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF57552 UniProtKB/TrEMBL
UniProt A0A2R8ZF26 ENTREZGENE, UniProtKB/TrEMBL