Advanced Search (OLGA)

Gene: CPEB1 (cytoplasmic polyadenylation element binding protein 1) Pan paniscus

Analyze

Symbol:

CPEB1

Name:

cytoplasmic polyadenylation element binding protein 1

RGD ID:

11896528

Description:

ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amenorrhea (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Bloom syndrome (ortholog); FOUND IN centrosome (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cytoplasmic polyadenylation element-binding protein 1; cytoplasmic polyadenylation element-binding protein 1-like; LOC117974320

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	73,237,912 - 73,342,404 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	77,398,584 - 77,503,074 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	62,949,264 - 63,053,994 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	80,443,096 - 80,546,163 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	80,443,096 - 80,526,948 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amenorrhea (ISO)

B-Cell Chronic Lymphocytic Leukemia (ISO)

Bloom syndrome (ISO)

colorectal cancer (ISO)

glioblastoma (ISO)

liver cirrhosis (ISO)

portal hypertension (ISO)

primary biliary cholangitis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to amino acid stimulus (ISO)

cellular response to hypoxia (ISO)

cellular response to insulin stimulus (ISO)

cellular response to lipopolysaccharide (ISO)

mRNA transport (ISO)

negative regulation of cell population proliferation (ISO)

negative regulation of cytoplasmic translation (IEA)

negative regulation of translation (ISO)

positive regulation of cell migration (ISO)

positive regulation of meiotic cell cycle process involved in oocyte maturation (ISO)

positive regulation of neuron projection development (ISO)

positive regulation of nitric oxide biosynthetic process (ISO)

positive regulation of translation (ISO)

regulation of mRNA 3'-end processing (ISO)

regulation of neuronal synaptic plasticity (ISO)

regulation of translation (IEA,ISO)

regulation of translation at synapse, modulating synaptic transmission (ISO)

synaptonemal complex assembly (ISO)

translation (IEA)

Cellular Component

centrosome (ISO)

cytoplasm (IEA)

cytosol (IEA)

glutamatergic synapse (ISO)

growth cone (ISO)

meiotic spindle (ISO)

membrane (ISO)

neuron projection (IEA)

neuronal cell body (ISO)

nucleoplasm (IEA)

nucleus (IEA)

perinuclear region of cytoplasm (ISO)

postsynapse (ISO)

postsynaptic density (ISO)

synapse (IEA)

Molecular Function

mRNA 3'-UTR AU-rich region binding (ISO)

mRNA 3'-UTR binding (IEA,ISO)

mRNA binding (ISO)

mRNA regulatory element binding translation repressor activity (IEA)

protein binding (ISO)

ribosome binding (IEA)

RNA binding (IEA)

translation factor activity, RNA binding (IEA)

translation regulator activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

CPEB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	73,237,912 - 73,342,404 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	77,398,584 - 77,503,074 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	62,949,264 - 63,053,994 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	80,443,096 - 80,546,163 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	80,443,096 - 80,526,948 (-)	Ensembl	panpan1.1		panPan2

CPEB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	82,543,201 - 82,648,795 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	82,543,201 - 82,648,861 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	83,211,951 - 83,317,546 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	81,009,006 - 81,113,783 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	81,009,640 - 81,094,275	NCBI
Celera	15	61,263,397 - 61,367,744 (+)	NCBI		Celera
Cytogenetic Map	15	q25.2	NCBI
HuRef	15	59,482,509 - 59,586,909 (-)	NCBI		HuRef
CHM1_1	15	82,953,574 - 83,058,345 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	80,407,439 - 80,513,020 (-)	NCBI		T2T-CHM13v2.0

Cpeb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	80,996,774 - 81,105,207 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	80,996,774 - 81,105,213 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	81,347,026 - 81,458,001 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	81,347,026 - 81,455,465 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	88,492,329 - 88,599,562 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	81,220,956 - 81,328,189 (-)	NCBI		MGSCv36	mm8
Celera	7	78,752,617 - 78,860,054 (-)	NCBI		Celera
Cytogenetic Map	7	D3	NCBI
cM Map	7	45.71	NCBI

Cpeb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	144,709,278 - 144,817,388 (-)	NCBI		GRCr8
mRatBN7.2	1	135,300,048 - 135,407,688 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	135,300,461 - 135,409,760 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	143,215,210 - 143,321,813 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	150,384,623 - 150,491,225 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	143,297,567 - 143,404,159 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	143,171,457 - 143,278,485 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	143,171,264 - 143,278,485 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	144,114,219 - 144,220,842 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	137,556,766 - 137,666,929 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	137,635,181 - 137,745,334 (-)	NCBI
Celera	1	127,351,540 - 127,457,741 (-)	NCBI		Celera
Cytogenetic Map	1	q31	NCBI

Cpeb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	13,981,657 - 14,039,705 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	13,963,300 - 14,038,691 (+)	NCBI	ChiLan1.0	ChiLan1.0

CPEB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	54,405,140 - 54,499,614 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	54,405,717 - 54,500,221 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	57,046,122 - 57,140,348 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	54,824,324 - 54,918,693 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	54,824,563 - 54,919,282 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	54,344,656 - 54,439,210 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	54,553,850 - 54,648,105 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	54,896,337 - 54,990,718 (-)	NCBI		UU_Cfam_GSD_1.0

Cpeb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	129,039,489 - 129,118,232 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936483	17,216,213 - 17,294,534 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936483	17,216,288 - 17,296,430 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CPEB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	52,304,472 - 52,383,732 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	52,329,054 - 52,382,408 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	57,815,438 - 57,867,976 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CPEB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	29	3,005,891 - 3,106,732 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	29	3,006,532 - 3,106,793 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	43,983,927 - 44,084,653 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cpeb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624768	18,386,415 - 18,468,879 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003815300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003815301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008968249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008968250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034939326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_057299926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063596887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063596888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063596889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000007904 ⟹ ENSPPAP00000001613

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	80,443,096 - 80,525,858 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000007964 ⟹ ENSPPAP00000001621

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	80,443,096 - 80,471,421 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000008446 ⟹ ENSPPAP00000001710

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	80,444,465 - 80,526,948 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000008509 ⟹ ENSPPAP00000001719

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	80,444,465 - 80,526,822 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000008548 ⟹ ENSPPAP00000001723

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	80,444,465 - 80,472,793 (-)	Ensembl

RefSeq Acc Id:

XM_003815300 ⟹ XP_003815348

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,239,186 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,399,858 - 77,503,074 (+)	NCBI
Mhudiblu_PPA_v0	15	62,950,430 - 63,053,994 (+)	NCBI
PanPan1.1	15	80,443,096 - 80,546,163 (-)	NCBI

Sequence:

show sequence

CGGTGGGGCCTCCGAGCCGCACTGCGGCCTCCGGGCGGCCTCGAGCGTCTGTCCAGACGGGAGC
TGACCGGACATAAAGGAGCACCGGCGCCCGGAACGTTTCTTTCTCACACTGCCGTCGCACGGGA
GACCCGAAGCCGCTGGCGCTGGAAGCTCACGCCCCCTGCGGGTGTCTTTAGCACCCGGCGCGCG
GTGGGGGGGACCGGGCGGGACGGGGCGGGGCTGCTGACGGCGTAGACCCCGTGCTCTGTGGAGA
GCCCCACGACGGCGGCGGGCGCGGCCCCTTTAAGGTGGAGGGCTCAAGCCCCTCGTGCGGCTTC
CCAATCCTGGGCAGGTCACGTGGCTTCACACCTTCGCTTGGCGCCGGAGAGGGAGTCTCGGGGG
CGGGGCTGGCCGGGTAGTGTGGCGCGAGGGCGGAAGACTGGCGGGGCTTCGTGCCCGGGAGACC
CGCGGGGCTGGCGGCATTGAGGAAGAAGAAGCAGGAAGGATAAAAGATTGCTGGGACAACCAGG
AAGCACCTGCTCTCTCCACGTGTAGTAATGCCAATATCTTTCGAAGGATAAATGCCATATTGGA
TAATTCTCTGGATTTCAGTAGAGTCTGCACTACACCTGTAAACCGAGGAATTCATGATCATTTG
CCAGACTTCCAGGACTCTGAAGAAACAGTTACAAGCAGGATGCTTTTCCCAACCTCTGCGCAAG
AATCTTCCCGTGGCCTCCCAGATGCAAATGACCTGTGCCTTGGCCTGCAGTCCCTCAGTCTGAC
AGGCTGGGACCGACCCTGGAGCACCCAGGACTCAGATTCCTCAGCCCAGAGCAGCACACACTCG
GTACTGAGCATGCTCCATAACCCACTGGGAAATGTCCTAGGAAAACCCCCCTTGAGCTTCCTGC
CTCTGGATCCCCTTGGGTCTGACTTGGTGGACAAGTTTCCAGCACCCCCAGTTAGAGGATCACG
CCTGGACACCCGGCCCATCCTGGACTCTCGATCTAGCAGCCCCTCTGACTCAGACACCAGTGGC
TTCAGCTCTGGATCAGATCATCTCTCAGATTTGATTTCAAGCCTTCGCATTTCTCCACCTCTGC
CCTTCCTGTCTCTGTCAGGGGGTGGTCCCAGAGACCCTTTAAAGATGGGGGTAGGGTCTCGGAT
GGACCAAGAGCAAGCTGCTCTTGCTGCAGTCACTCCCTCCCCAACCAGTGCTTCAAAGAGATGG
CCAGGAGCTTCTGTGTGGCCATCCTGGGACCTCCTCGAAACTCCCAAAGACCCCTTCAGCATAG
AGAGAGAGGCCAGGCTGCACCGACAAGCTGCAGCTGTGAATGAAGCCACCTGTACCTGGAGTGG
CCAGCTTCCTCCCCGGAACTATAAGAACCCCATCTACTCTTGCAAGGTGTTTCTAGGAGGTGTT
CCTTGGGATATTACAGAAGCTGGATTAGTTAACACCTTCCGTGTTTTTGGCTCTTTGAGTGTGG
AGTGGCCTGGTAAGGATGGCAAGCATCCCCGGTGTCCTCCCAAAGGGTATGTGTATCTGGTCTT
CGAACTAGAGAAGTCTGTCCGATCCTTGCTTCAGGCTTGCTCTCATGACCCGCTGAGCCCAGAT
GGCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAAGGATGCGCTGCAAGGAGGTGCAGGTGA
TCCCCTGGGTATTAGCCGACAGTAACTTTGTCCGGAGCCCATCTCAGAGGCTTGACCCCAGCAG
GACGGTGTTTGTCGGTGCTCTGCATGGAATGCTAAATGCTGAGGCCCTGGCAGCCATCTTGAAC
GACCTATTTGGTGGAGTGGTGTATGCCGGGATTGACACAGATAAGCACAAGTATCCCATTGGTT
CTGGTCGTGTGACTTTCAATAACCAACGGAGTTACCTGAAAGCAGTCAGCGCTGCTTTTGTGGA
GATCAAAACCACCAAGTTCACAAAGAAGGTTCAGATTGACCCCTACCTAGAAGATTCTCTGTGT
CATATCTGCAGTTCTCAGCCTGGTCCTTTCTTCTGTCGAGATCAGGTCTGCTTCAAATACTTCT
GCCGGAGCTGCTGGCACTGGCGGCACAGCATGGAGGGCCTGCGCCACCACAGCCCCCTGATGCG
GAACCAGAAGAACCGAGATTCCAGCTAGAGGAGCTGGCCTTGCCCAGTGGCCTGTGGCGCCCAA
AGCTGGCAGGTCAGGCAAACAGCCTGCACCACCCTGCCACTGGCGACCAGGGAGCTGGCTTCCC
AAGGACAAGGGAAAATTGTAGTCACCTTTGCACTTGCTGAATCTGTCTTTGTTTCTGCACTAAT
TAATGCACATTGAGTTTTGTCAGGTTTTGTTTTCAGGGGGTATACCAAGGGCAAGGACCCTCTG
GCTTACCCTCCAAGCGACTCTGTAGTTTTCCCAGATTTTAGTTCCTCATTTTGCAGATGAAAAG
CGGGAAAAAAAAAAGAAAAAAAGAACTACGTGTCCAGAAGGTATTGAGGTATTGACACGGATGC
CTACACCTAGGTTTATTTATTAAAAGCGCTTTTTTACATTCCTTGCAATACTGATGGTGATGAT
GCGCAGGTCTCATTGGTTTCATTCTTGCAGTTGCCATACAGTGCCTTTCCATTTATTTAACCCC
CACCTGAACGGCATAAACTGAGTGTTCAGCTGGTGTTTTTTACTGTAAACAATAAGGAGACTTT
GCTCTTCATTTAAACCAAAATCATATTTCATATTTTACGCTCGAGGGTTTTTACCGGTTCCTTT
TTACACTCCTTAAAACAGTTTTTAAGTCGTTTGGAACAAGATATTTTTCTTTCCTGGCAGCTTT
TAACATTATAGCAAATTTGTGTCTGGGGGACTGCTGGTCACTGTTTCTCACAGTTGCAAATCAA
GGCATTTGCAACCAAGAAAAAAAATATTTTTGTTTTATTTGAAACTGGACCGGATAAACGGTGT
TTGAGCGGCTGCTGTATATAGTTTTAAATGGTTTATTGCACCTCCTTAAGTTGCACTTATGTGG
GGGGGTGGGGTTGATAGAAGTTTTTAATCACAAAGTCACAGGACTTTTTTCTTTTGTAACTGAG
CTAAAAAGGGCTGCTTTTCGGTGGGGGCAGATGAAGGCTCACAGGAGCCCTTTCTCTTAGAGGG
GGCAAGTACCCTTCCCTTGTATCTTTAATTTGAGGAATGTATGAGATAACAGTTGCAGTTGACT
GAAATTTGAAAACTTGACTTTTTTTTCTTTCCCTTTTTTTTTTTTAAAAAAAAAAAAGAAAAAA
CCCACAAAAACTACTTGCCCCTCCTAGGGAAGCTGTGTGCCAAAGAACCAGTGTCATAACCCCT
CCCTCCTGCTGAGCTGACGTTGCATTGTTGCATATCCCAGCTACTCTGTGGGTTTTGTGAAGCT
GTGTGTGAAGTCTCTACCTCATTGTAGTATATGCAGGCAAGACTGCACTCTCCTACAGATGTGT
GGAGTAAGCTGTGGTGTAGTTTTTTTGGCACATAATAAACACGTTGCAGCAGA

hide sequence

RefSeq Acc Id:

XM_034939316 ⟹ XP_034795207

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,253,297 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,413,971 - 77,503,074 (+)	NCBI
Mhudiblu_PPA_v0	15	62,969,586 - 63,053,994 (+)	NCBI

RefSeq Acc Id:

XM_034939318 ⟹ XP_034795209

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,238,455 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,399,127 - 77,503,074 (+)	NCBI
Mhudiblu_PPA_v0	15	62,949,658 - 63,053,994 (+)	NCBI

RefSeq Acc Id:

XM_034939320 ⟹ XP_034795211

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,238,409 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,399,081 - 77,503,074 (+)	NCBI
Mhudiblu_PPA_v0	15	62,949,662 - 63,053,994 (+)	NCBI

RefSeq Acc Id:

XM_055098882 ⟹ XP_054954857

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,242,194 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,402,866 - 77,503,074 (+)	NCBI

RefSeq Acc Id:

XM_055098883 ⟹ XP_054954858

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,242,171 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,402,843 - 77,503,074 (+)	NCBI

RefSeq Acc Id:

XM_055098884 ⟹ XP_054954859

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,242,185 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,402,857 - 77,503,074 (+)	NCBI

RefSeq Acc Id:

XM_055098885 ⟹ XP_054954860

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,237,912 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,398,584 - 77,503,074 (+)	NCBI

RefSeq Acc Id:

XM_057299926 ⟹ XP_057155909

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,253,297 - 73,342,404 (+)	NCBI
NHGRI_mPanPan1	15	77,413,971 - 77,503,074 (+)	NCBI

RefSeq Acc Id:

XM_063596887 ⟹ XP_063452957

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,239,107 - 73,342,404 (+)	NCBI

RefSeq Acc Id:

XM_063596888 ⟹ XP_063452958

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,238,877 - 73,342,404 (+)	NCBI

RefSeq Acc Id:

XM_063596889 ⟹ XP_063452959

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	73,313,895 - 73,342,404 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003815348	(Get FASTA)	NCBI Sequence Viewer
	XP_034795207	(Get FASTA)	NCBI Sequence Viewer
	XP_034795209	(Get FASTA)	NCBI Sequence Viewer
	XP_034795211	(Get FASTA)	NCBI Sequence Viewer
	XP_054954857	(Get FASTA)	NCBI Sequence Viewer
	XP_054954858	(Get FASTA)	NCBI Sequence Viewer
	XP_054954859	(Get FASTA)	NCBI Sequence Viewer
	XP_054954860	(Get FASTA)	NCBI Sequence Viewer
	XP_057155909	(Get FASTA)	NCBI Sequence Viewer
	XP_063452957	(Get FASTA)	NCBI Sequence Viewer
	XP_063452958	(Get FASTA)	NCBI Sequence Viewer
	XP_063452959	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000001613.1
	ENSPPAP00000001621.1
	ENSPPAP00000001710
	ENSPPAP00000001710.1
	ENSPPAP00000001719.1
	ENSPPAP00000001723.1

RefSeq Acc Id:	XP_003815348 ⟸ XM_003815300
- Peptide Label:	isoform X6
- UniProtKB:	A0A2R8ZG50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVL GKPPLSFLPLDPLGSDLVDKFPAPPVRGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLIS SLRISPPLPFLSLSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLE TPKDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTF RVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRR MRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDT DKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCR DQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS hide sequence

RefSeq Acc Id:	XP_034795209 ⟸ XM_034939318
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034795211 ⟸ XM_034939320
- Peptide Label:	isoform X4
- UniProtKB:	A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034795207 ⟸ XM_034939316
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R8ZG50 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSPPAP00000001613 ⟸ ENSPPAT00000007904

Ensembl Acc Id:

ENSPPAP00000001621 ⟸ ENSPPAT00000007964

Ensembl Acc Id:

ENSPPAP00000001710 ⟸ ENSPPAT00000008446

Ensembl Acc Id:

ENSPPAP00000001719 ⟸ ENSPPAT00000008509

Ensembl Acc Id:

ENSPPAP00000001723 ⟸ ENSPPAT00000008548

RefSeq Acc Id:	XP_054954860 ⟸ XM_055098885
- Peptide Label:	isoform X5
- UniProtKB:	A0A2R8Z9T2 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054954858 ⟸ XM_055098883
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8Z9N1 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054954859 ⟸ XM_055098884
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8Z9N1 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_054954857 ⟸ XM_055098882
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8Z9N1 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_057155909 ⟸ XM_057299926
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8Z9N1 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063452958 ⟸ XM_063596888
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8Z9N1 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063452957 ⟸ XM_063596887
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R8Z9N1 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063452959 ⟸ XM_063596889
- Peptide Label:	isoform X5
- UniProtKB:	A0A2R8Z9T2 (UniProtKB/TrEMBL), A0A2R8ZG50 (UniProtKB/TrEMBL)

Protein Domains

RRM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000006926	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000007904.1	UniProtKB/TrEMBL
	ENSPPAT00000007964.1	UniProtKB/TrEMBL
	ENSPPAT00000008446.1	UniProtKB/TrEMBL
	ENSPPAT00000008509.1	UniProtKB/TrEMBL
	ENSPPAT00000008548.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
	4.10.640.40	UniProtKB/TrEMBL
InterPro	CEBP1_N	UniProtKB/TrEMBL
	CEBP_ZZ	UniProtKB/TrEMBL
	CEBP_ZZ_sf	UniProtKB/TrEMBL
	CPEB	UniProtKB/TrEMBL
	CPEB1_RRM1	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
NCBI Gene	CPEB1	ENTREZGENE
PANTHER	CYTOPLASMIC POLYADENYLATION ELEMENT-BINDING PROTEIN 1	UniProtKB/TrEMBL
	PTHR12566	UniProtKB/TrEMBL
Pfam	CEBP1_N	UniProtKB/TrEMBL
	CEBP_ZZ	UniProtKB/TrEMBL
	RRM_7	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A2R8Z9N1	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8Z9T2	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZDS7_PANPA	UniProtKB/TrEMBL
	A0A2R8ZG50	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R8ZGF5_PANPA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-04-20	CPEB1	cytoplasmic polyadenylation element binding protein 1	LOC117974320	cytoplasmic polyadenylation element-binding protein 1-like	Data merged from RGD:32727100	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD