ATP6V1G3 (ATPase H+ transporting V1 subunit G3) - Rat Genome Database

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Gene: ATP6V1G3 (ATPase H+ transporting V1 subunit G3) Pan paniscus
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Symbol: ATP6V1G3
Name: ATPase H+ transporting V1 subunit G3
RGD ID: 11853571
Description: ENCODES a protein that exhibits ATP hydrolysis activity (inferred); ATPase binding (inferred); proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN proton transmembrane transport (inferred); synaptic vesicle lumen acidification (inferred); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); parathyroid carcinoma (ortholog); FOUND IN cytosol (inferred); plasma membrane (inferred); synaptic vesicle membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: V-type proton ATPase subunit G 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2150,834,517 - 50,852,067 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1150,793,764 - 50,811,547 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01174,130,976 - 174,148,524 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11178,440,516 - 178,458,092 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1178,440,516 - 178,458,108 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ATP6V1G3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2150,834,517 - 50,852,067 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1150,793,764 - 50,811,547 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01174,130,976 - 174,148,524 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11178,440,516 - 178,458,092 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1178,440,516 - 178,458,108 (-)Ensemblpanpan1.1panPan2
ATP6V1G3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381198,523,222 - 198,540,945 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1198,523,222 - 198,540,945 (-)EnsemblGRCh38hg38GRCh38
GRCh371198,492,352 - 198,510,075 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361196,758,975 - 196,776,698 (-)NCBINCBI36Build 36hg18NCBI36
Build 341195,224,010 - 195,241,732NCBI
Celera1171,614,921 - 171,632,643 (-)NCBICelera
Cytogenetic Map1q31.3NCBI
HuRef1169,659,548 - 169,677,275 (-)NCBIHuRef
CHM1_11199,914,674 - 199,932,396 (-)NCBICHM1_1
T2T-CHM13v2.01197,783,117 - 197,800,839 (-)NCBIT2T-CHM13v2.0
Atp6v1g3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391138,201,476 - 138,217,200 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1138,201,476 - 138,217,200 (+)EnsemblGRCm39 Ensembl
GRCm381138,273,738 - 138,289,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1138,273,738 - 138,289,462 (+)EnsemblGRCm38mm10GRCm38
MGSCv371140,170,315 - 140,186,039 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361140,090,149 - 140,105,873 (+)NCBIMGSCv36mm8
Celera1140,915,081 - 140,930,807 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map160.82NCBI
Atp6v1g3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81352,351,787 - 52,376,784 (+)NCBIGRCr8
mRatBN7.21349,800,256 - 49,825,247 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1349,794,222 - 49,825,247 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1352,418,239 - 52,432,667 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01353,706,130 - 53,720,558 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01350,973,369 - 50,987,782 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01355,265,794 - 55,288,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1355,274,199 - 55,288,651 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01360,297,386 - 60,321,789 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41351,462,070 - 51,476,522 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11351,438,095 - 51,489,937 (+)NCBI
Celera1350,095,450 - 50,109,898 (+)NCBICelera
Cytogenetic Map13q13NCBI
Atp6v1g3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540634,910,498 - 34,927,745 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540634,910,498 - 34,927,745 (-)NCBIChiLan1.0ChiLan1.0
ATP6V1G3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.174,368,476 - 4,388,544 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl74,368,418 - 4,388,539 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha74,053,554 - 4,073,662 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.074,054,400 - 4,074,512 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl74,054,387 - 4,074,504 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.174,001,449 - 4,021,551 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.074,102,151 - 4,122,266 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.074,134,335 - 4,154,453 (+)NCBIUU_Cfam_GSD_1.0
Atp6v1g3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934476,227,144 - 76,242,234 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365675,461,760 - 5,476,879 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365675,461,760 - 5,476,893 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP6V1G3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1021,371,257 - 21,410,296 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11021,371,302 - 21,394,817 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21026,048,320 - 26,071,801 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ATP6V1G3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12530,867,341 - 30,886,380 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2530,868,161 - 30,886,540 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605531,756,940 - 31,775,447 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp6v1g3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247981,891,613 - 1,910,104 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247981,893,699 - 1,910,104 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003823067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000043853   ⟹   ENSPPAP00000021054
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1178,440,516 - 178,458,108 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000043857   ⟹   ENSPPAP00000021058
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1178,440,685 - 178,458,007 (-)Ensembl
RefSeq Acc Id: XM_003823067   ⟹   XP_003823115
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2150,834,517 - 50,852,067 (+)NCBI
NHGRI_mPanPan1150,793,764 - 50,811,547 (+)NCBI
Mhudiblu_PPA_v01174,130,976 - 174,148,524 (-)NCBI
PanPan1.11178,440,516 - 178,458,092 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003823115 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000021054
  ENSPPAP00000021054.1
  ENSPPAP00000021058.1
RefSeq Acc Id: XP_003823115   ⟸   XM_003823067
- UniProtKB: A0A2R9B0Y6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000021054   ⟸   ENSPPAT00000043853
Ensembl Acc Id: ENSPPAP00000021058   ⟸   ENSPPAT00000043857


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033756 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000043853.1 UniProtKB/TrEMBL
  ENSPPAT00000043857.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.2950 UniProtKB/TrEMBL
InterPro V-ATPase_G UniProtKB/TrEMBL
KEGG Report pps:100990654 UniProtKB/TrEMBL
NCBI Gene ATP6V1G3 ENTREZGENE
PANTHER PTHR12713 UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE SUBUNIT G 3 UniProtKB/TrEMBL
Pfam V-ATPase_G UniProtKB/TrEMBL
UniProt A0A2R9AV29_PANPA UniProtKB/TrEMBL
  A0A2R9B0Y6 ENTREZGENE, UniProtKB/TrEMBL