CPOX (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 96,505,625 - 96,529,606 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 96,510,420 - 96,534,386 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 95,674,861 - 95,689,139 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 102,358,149 - 102,372,323 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 102,359,382 - 102,372,170 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CPOX (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 98,570,488 - 98,593,611 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 98,579,446 - 98,593,648 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 98,298,290 - 98,312,455 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 99,780,980 - 99,795,131 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 99,780,981 - 99,795,131 | NCBI | | | | | Celera | 3 | 96,689,942 - 96,704,107 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q11.2 | NCBI | | | | | HuRef | 3 | 95,670,419 - 95,684,588 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 98,261,466 - 98,275,631 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 101,272,112 - 101,297,297 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Cpox (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 58,490,571 - 58,500,754 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 58,490,655 - 58,537,999 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 58,670,208 - 58,680,391 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 58,670,292 - 58,717,636 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 58,670,321 - 58,680,504 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 58,612,835 - 58,622,904 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 58,961,121 - 58,971,379 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | C1.2 | NCBI | | | | |
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Cpox (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 55,405,778 - 55,415,761 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 41,936,585 - 41,946,568 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 41,936,591 - 41,946,746 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 50,684,226 - 50,694,252 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 43,345,792 - 43,355,818 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 42,474,428 - 42,484,454 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 44,039,665 - 44,049,648 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 44,039,669 - 44,049,648 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 47,229,581 - 47,239,564 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 42,748,703 - 42,758,686 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 42,807,556 - 42,935,211 (-) | NCBI | | | | | Celera | 11 | 41,735,836 - 41,745,819 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q12 | NCBI | | | | |
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Cpox (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955427 | 152,894 - 164,030 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955427 | 152,397 - 163,570 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CPOX (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 33 | 5,446,022 - 5,459,152 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 33 | 5,447,414 - 5,459,461 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 33 | 5,596,705 - 5,613,382 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 33 | 5,579,096 - 5,595,946 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 33 | 5,535,265 - 5,595,946 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 33 | 5,456,702 - 5,473,645 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 33 | 5,519,969 - 5,536,809 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 33 | 5,796,805 - 5,813,754 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Cpox (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 151,514,512 - 151,526,977 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936630 | 4,412,273 - 4,425,520 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936630 | 4,412,099 - 4,424,867 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CPOX (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 160,332,436 - 160,348,232 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 160,332,436 - 160,345,862 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 170,521,920 - 170,535,349 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CPOX (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 82,252,163 - 82,265,827 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 82,251,972 - 82,267,350 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 84,286,976 - 84,301,373 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Cpox (Heterocephalus glaber - naked mole-rat) |
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