CEBPG (CCAAT enhancer binding protein gamma) - Rat Genome Database

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Gene: CEBPG (CCAAT enhancer binding protein gamma) Pan paniscus
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Symbol: CEBPG
Name: CCAAT enhancer binding protein gamma
RGD ID: 11821773
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN liver development (ortholog); mRNA metabolic process (ortholog); negative regulation of DNA-binding transcription factor activity (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 75 (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); RNA polymerase II transcription regulator complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CCAAT/enhancer binding protein gamma; CCAAT/enhancer-binding protein gamma
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22039,345,539 - 39,354,475 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11941,345,573 - 41,354,513 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01930,295,603 - 30,304,984 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11939,039,837 - 39,049,671 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1939,046,219 - 39,046,671 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CEBPG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22039,345,539 - 39,354,475 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11941,345,573 - 41,354,513 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01930,295,603 - 30,304,984 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11939,039,837 - 39,049,671 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1939,046,219 - 39,046,671 (+)Ensemblpanpan1.1panPan2
CEBPG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381933,373,709 - 33,382,686 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1933,373,685 - 33,382,686 (+)EnsemblGRCh38hg38GRCh38
GRCh371933,864,615 - 33,873,592 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361938,556,449 - 38,565,432 (+)NCBINCBI36Build 36hg18NCBI36
Build 341938,556,448 - 38,565,431NCBI
Celera1930,558,181 - 30,567,164 (+)NCBICelera
Cytogenetic Map19q13.11NCBI
HuRef1930,365,211 - 30,374,228 (+)NCBIHuRef
CHM1_11933,865,529 - 33,874,546 (+)NCBICHM1_1
T2T-CHM13v2.01935,893,494 - 35,902,471 (+)NCBIT2T-CHM13v2.0
Cebpg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39734,745,847 - 34,755,991 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl734,745,847 - 34,755,998 (-)EnsemblGRCm39 Ensembl
GRCm38735,046,422 - 35,056,566 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl735,046,422 - 35,056,573 (-)EnsemblGRCm38mm10GRCm38
MGSCv37735,831,441 - 35,841,585 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36734,755,545 - 34,765,263 (-)NCBIMGSCv36mm8
Celera730,182,296 - 30,192,439 (-)NCBICelera
Cytogenetic Map7B2NCBI
cM Map720.91NCBI
Cebpg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8196,820,981 - 96,829,736 (-)NCBIGRCr8
mRatBN7.2187,683,060 - 87,692,772 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl187,684,019 - 87,694,569 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx193,083,770 - 93,090,520 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01101,549,756 - 101,556,506 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0194,842,069 - 94,848,819 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0191,286,956 - 91,297,459 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl191,287,917 - 91,296,656 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0192,417,890 - 92,442,666 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4187,552,695 - 87,559,447 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1187,630,805 - 87,637,558 (-)NCBI
Celera182,038,947 - 82,045,699 (-)NCBICelera
Cytogenetic Map1q21NCBI
Cebpg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554683,137,106 - 3,141,733 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554683,137,106 - 3,141,733 (+)NCBIChiLan1.0ChiLan1.0
CEBPG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11118,777,110 - 118,784,397 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1118,778,224 - 118,778,667 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1118,176,203 - 118,186,035 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01119,373,710 - 119,383,542 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1119,376,715 - 119,377,158 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11118,934,395 - 118,944,213 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01118,560,906 - 118,570,734 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01119,619,593 - 119,629,416 (-)NCBIUU_Cfam_GSD_1.0
Cebpg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093499,201,634 - 9,210,667 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365702,438,187 - 2,438,639 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365702,435,672 - 2,439,056 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEBPG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl643,164,919 - 43,174,990 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1643,164,902 - 43,175,002 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2638,712,133 - 38,722,192 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CEBPG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1628,415,448 - 28,424,463 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660736,139,851 - 6,148,871 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cebpg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247949,729,876 - 9,736,516 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247949,727,616 - 9,736,729 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003816198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000027484   ⟹   ENSPPAP00000006337
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1939,046,219 - 39,046,671 (+)Ensembl
RefSeq Acc Id: XM_003816198   ⟹   XP_003816246
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22039,345,539 - 39,354,475 (+)NCBI
NHGRI_mPanPan11941,345,573 - 41,354,513 (+)NCBI
Mhudiblu_PPA_v01930,295,603 - 30,304,984 (+)NCBI
PanPan1.11939,039,837 - 39,049,671 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003816246 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000006337.1
RefSeq Acc Id: XP_003816246   ⟸   XM_003816198
- UniProtKB: A0A2R8ZTZ3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000006337   ⟸   ENSPPAT00000027484
Protein Domains
bZIP


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000024897 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000027484.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/TrEMBL
InterPro bZIP UniProtKB/TrEMBL
  bZIP_sf UniProtKB/TrEMBL
  C/EBP UniProtKB/TrEMBL
KEGG Report pps:100989464 UniProtKB/TrEMBL
NCBI Gene CEBPG ENTREZGENE
PANTHER CCAAT/ENHANCER BINDING PROTEIN UniProtKB/TrEMBL
  CCAAT/ENHANCER-BINDING PROTEIN GAMMA UniProtKB/TrEMBL
Pfam bZIP_2 UniProtKB/TrEMBL
PROSITE BZIP UniProtKB/TrEMBL
SMART BRLZ UniProtKB/TrEMBL
Superfamily-SCOP SSF57959 UniProtKB/TrEMBL
UniProt A0A2R8ZTZ3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-02-27 CEBPG  CCAAT enhancer binding protein gamma    CCAAT/enhancer binding protein gamma  Symbol and/or name change 5135510 APPROVED