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Gene: ATP6V0E1 (ATPase H+ transporting V0 subunit e1) Pan paniscus

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Symbol:

ATP6V0E1

Name:

ATPase H+ transporting V0 subunit e1

RGD ID:

11786911

Description:

ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN response to amino acid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); atrial heart septal defect 7 (ortholog); Atrial Septal Defect with Atrioventricular Conduction Defects (ortholog); FOUND IN proton-transporting V-type ATPase complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

V-type proton ATPase subunit e 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	168,122,157 - 168,173,543 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	166,261,700 - 166,313,085 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	168,336,845 - 168,388,230 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	175,246,088 - 175,297,288 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	175,246,088 - 175,297,289 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

atrial heart septal defect 7 (ISO)

Atrial Septal Defect with Atrioventricular Conduction Defects (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proton transmembrane transport (IEA)

response to amino acid (ISO)

transmembrane transport (IEA)

Cellular Component

membrane (IEA)

proton-transporting V-type ATPase complex (ISO)

proton-transporting V-type ATPase, V0 domain (IEA)

Molecular Function

protein binding (ISO)

proton-transporting ATPase activity, rotational mechanism (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ATP6V0E1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	168,122,157 - 168,173,543 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	166,261,700 - 166,313,085 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	168,336,845 - 168,388,230 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	175,246,088 - 175,297,288 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	175,246,088 - 175,297,289 (+)	Ensembl	panpan1.1		panPan2

ATP6V0E1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	172,983,771 - 173,035,445 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	172,983,771 - 173,035,445 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	172,410,774 - 172,462,448 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	172,343,369 - 172,394,506 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	172,343,368 - 172,394,506	NCBI
Celera	5	168,443,924 - 168,495,366 (+)	NCBI		Celera
Cytogenetic Map	5	q35.1	NCBI
HuRef	5	167,505,479 - 167,556,521 (+)	NCBI		HuRef
CHM1_1	5	171,843,454 - 171,894,641 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	173,523,874 - 173,575,550 (+)	NCBI		T2T-CHM13v2.0

Atp6v0e
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	26,895,370 - 26,918,621 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	26,882,205 - 26,918,621 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	26,676,396 - 26,699,647 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	26,663,231 - 26,699,647 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	26,813,341 - 26,836,592 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	26,403,996 - 26,427,237 (+)	NCBI		MGSCv36	mm8
Celera	17	27,212,703 - 27,236,263 (+)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	13.46	NCBI

Atp6v0e1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	16,984,084 - 17,007,156 (-)	NCBI		GRCr8
mRatBN7.2	10	16,479,656 - 16,502,732 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	16,479,567 - 16,524,434 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	21,229,547 - 21,252,658 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	20,718,119 - 20,741,226 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	16,207,894 - 16,230,961 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	16,769,857 - 16,792,930 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	16,769,666 - 16,792,909 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	16,661,968 - 16,685,040 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	16,741,507 - 16,764,579 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	16,742,555 - 16,765,628 (-)	NCBI
Celera	10	16,138,176 - 16,161,412 (-)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

Atp6v0e1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	25,667,703 - 25,703,550 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	25,667,703 - 25,703,550 (+)	NCBI	ChiLan1.0	ChiLan1.0

ATP6V0E1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	39,378,007 - 39,409,968 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	39,378,004 - 39,409,981 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	39,323,465 - 39,355,356 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	39,749,010 - 39,780,983 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	39,749,007 - 39,780,996 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	39,565,769 - 39,597,687 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	39,755,511 - 39,787,428 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	40,264,617 - 40,296,553 (-)	NCBI		UU_Cfam_GSD_1.0

Atp6v0e1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	93,787,496 - 93,811,256 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936609	2,510,182 - 2,533,925 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936609	2,510,178 - 2,533,934 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ATP6V0E1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	16	51,225,719 - 51,260,712 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	55,538,813 - 55,574,011 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	16	q	NCBI

ATP6V0E1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	75,149,843 - 75,199,475 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	75,149,710 - 75,200,192 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	3,412,129 - 3,462,226 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Atp6v0e1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	17,032,011 - 17,070,152 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	17,032,792 - 17,069,319 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003813999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000051107 ⟹ ENSPPAP00000028261

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	175,246,088 - 175,297,289 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000051113 ⟹ ENSPPAP00000028267

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	175,246,189 - 175,296,816 (+)	Ensembl

Ensembl Acc Id:

ENSPPAT00000051116 ⟹ ENSPPAP00000028270

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	5	175,246,189 - 175,283,164 (+)	Ensembl

RefSeq Acc Id:

XM_003813999 ⟹ XP_003814047

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	4	168,122,157 - 168,173,543 (+)	NCBI
NHGRI_mPanPan1	5	166,261,700 - 166,313,085 (+)	NCBI
Mhudiblu_PPA_v0	5	168,336,845 - 168,388,230 (+)	NCBI
PanPan1.1	5	175,246,088 - 175,297,288 (+)	NCBI

Sequence:

show sequence

AGGCGGGGCTTGCACACGCTGGTCACGCGGTCAGCTATTGACACTTCCTGGTGGGATCCGAGTG
AGGCGACGGGGTAGGGGTTGGCGCTCAGGCGGCGACCATGGCGTATCACGGCCTCACTGTGCCT
CTTATTGTGATGAGCGTGTTCTGGGGCTTCGTCGGCTTCTTGGTGCCTTGGTTCATCCCTAAGG
GTCCTAACCGGGGAGTTATCATTACCATGTTGGTGACCTGTTCAGTTTGCTGCTATCTCTTTTG
GCTGATTGCAATTCTGGCCCAACTCAACCCTCTCTTTGGACCGCAATTGAAAAATGAAACCATC
TGGTATCTGAAGTATCATTGGCCTTGAGGAAGAAGACATGCTCTACAGTGCTCAGTCTTTGAGG
TCACGAGAAGAGAATGCCTTCTAGATGCAAAATCACCTCCAAACCAGACCACTTTTCTTGACTT
GCCTGTTTTGGCCATTAGCTGCCTTAAACGTTAACAGCACATTTGAATGCCTTATTCTACAATG
CAGCGTGTTTTCCTTTGCCTTTTTTGCACTTTGGTGAATTACGTGCCTACATAACCTGAACTGT
GCCGACTCCACAAAACAATTATGTACTCTTCTGAGATAGAAGATGCTGTTCTTCTGAGAGATAC
GTTACTCTCTCCTTGGAATCTGTGGATTTGAAGATGGCTCCTGCCTTCTCACGTGGGAATCAGT
GAAGTGTTTAGAAACCGCTGCAAGACAAACAAGACTCCAGTGGGGTGGTCAGTAGGAGAGCACG
TTCAGAGGGAAGAGCCATCTCAACAGAATCGCACCAAACTATACTTTCAGGATGAATTTCTTCT
TTCTGCCATCTTTTGGAATAAATATTTTCCTCCTTTCTATGGAAATCT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003814047	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000028261
	ENSPPAP00000028261.1
	ENSPPAP00000028267.1
	ENSPPAP00000028270.1

RefSeq Acc Id:	XP_003814047 ⟸ XM_003813999
- UniProtKB:	A0A2R9BNP6 (UniProtKB/TrEMBL), A0A2R9BF50 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAYHGLTVPLIVMSVFWGFVGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLF GPQLKNETIWYLKYHWP hide sequence

Ensembl Acc Id:

ENSPPAP00000028261 ⟸ ENSPPAT00000051107

Ensembl Acc Id:

ENSPPAP00000028270 ⟸ ENSPPAT00000051116

Ensembl Acc Id:

ENSPPAP00000028267 ⟸ ENSPPAT00000051113

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000037191	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000051107.1	UniProtKB/TrEMBL
	ENSPPAT00000051113.1	UniProtKB/TrEMBL
	ENSPPAT00000051116.1	UniProtKB/TrEMBL
InterPro	ATPase_V0-cplx_e1/e2_su	UniProtKB/TrEMBL
	ATPase_V0-cplx_e1/e2_su_met	UniProtKB/TrEMBL
KEGG Report	pps:100980956	UniProtKB/TrEMBL
NCBI Gene	ATP6V0E1	ENTREZGENE
PANTHER	PTHR12263	UniProtKB/TrEMBL
	V-TYPE PROTON ATPASE SUBUNIT E 1	UniProtKB/TrEMBL
Pfam	ATP_synt_H	UniProtKB/TrEMBL
PIRSF	V-ATP_synth_e1/e2	UniProtKB/TrEMBL
UniProt	A0A2R9BF50	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BIY5_PANPA	UniProtKB/TrEMBL
	A0A2R9BNP6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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