EIF4EBP1 (eukaryotic translation initiation factor 4E binding protein 1) - Rat Genome Database

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Gene: EIF4EBP1 (eukaryotic translation initiation factor 4E binding protein 1) Pan paniscus
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Symbol: EIF4EBP1
Name: eukaryotic translation initiation factor 4E binding protein 1
RGD ID: 11715114
Description: ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein phosphatase 2A binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hereditary spastic paraplegia 54 (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog); protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: eukaryotic translation initiation factor 4E-binding protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2756,597,290 - 56,623,385 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1832,314,289 - 32,340,364 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0837,336,698 - 37,362,768 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1834,513,276 - 34,539,170 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl834,513,359 - 34,538,936 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
EIF4EBP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2756,597,290 - 56,623,385 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1832,314,289 - 32,340,364 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0837,336,698 - 37,362,768 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1834,513,276 - 34,539,170 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl834,513,359 - 34,538,936 (+)Ensemblpanpan1.1panPan2
EIF4EBP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38838,030,534 - 38,060,365 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl838,030,534 - 38,060,365 (+)EnsemblGRCh38hg38GRCh38
GRCh37837,888,052 - 37,917,883 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36838,007,177 - 38,037,040 (+)NCBINCBI36Build 36hg18NCBI36
Build 34838,007,184 - 38,037,033NCBI
Celera836,839,744 - 36,869,730 (+)NCBICelera
Cytogenetic Map8p11.23NCBI
HuRef836,422,762 - 36,452,631 (+)NCBIHuRef
CHM1_1838,089,511 - 38,119,376 (+)NCBICHM1_1
T2T-CHM13v2.0838,306,935 - 38,336,767 (+)NCBIT2T-CHM13v2.0
Eif4ebp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39827,750,355 - 27,765,684 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl827,750,357 - 27,766,702 (+)EnsemblGRCm39 Ensembl
GRCm38827,260,327 - 27,275,656 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl827,260,329 - 27,276,674 (+)EnsemblGRCm38mm10GRCm38
MGSCv37828,370,799 - 28,386,128 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36828,726,338 - 28,742,604 (+)NCBIMGSCv36mm8
Celera828,750,731 - 28,766,068 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map815.95NCBI
Eif4ebp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81671,495,457 - 71,508,845 (-)NCBIGRCr8
mRatBN7.21664,792,595 - 64,805,984 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1664,790,226 - 64,805,984 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1670,075,417 - 70,089,698 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01673,481,763 - 73,496,043 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01668,727,984 - 68,741,372 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01668,954,860 - 68,968,248 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1668,954,875 - 68,968,248 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01668,580,263 - 68,593,651 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41669,110,522 - 69,123,895 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11669,110,729 - 69,124,101 (-)NCBI
Celera1662,716,014 - 62,729,409 (-)NCBICelera
Cytogenetic Map16q12.3NCBI
Eif4ebp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546313,702,434 - 13,720,875 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546313,702,434 - 13,720,875 (+)NCBIChiLan1.0ChiLan1.0
EIF4EBP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11627,389,850 - 27,410,154 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1627,390,181 - 27,410,110 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1627,907,070 - 27,927,375 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01629,288,782 - 29,309,298 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1629,289,113 - 29,309,320 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11627,511,040 - 27,531,340 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01628,088,513 - 28,108,833 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01628,127,776 - 28,148,089 (-)NCBIUU_Cfam_GSD_1.0
Eif4ebp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494349,999,266 - 50,015,195 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367101,446,030 - 1,461,945 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF4EBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1548,422,816 - 48,443,399 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11548,423,001 - 48,443,373 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21555,557,800 - 55,560,845 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EIF4EBP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1836,063,311 - 36,092,439 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660525,902,191 - 5,931,737 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eif4ebp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247805,543,117 - 5,561,261 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247805,543,117 - 5,561,285 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034965947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000050000   ⟹   ENSPPAP00000027162
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl834,513,359 - 34,538,936 (+)Ensembl
RefSeq Acc Id: XM_034965947   ⟹   XP_034821838
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2756,597,290 - 56,623,385 (+)NCBI
NHGRI_mPanPan1832,314,289 - 32,340,364 (+)NCBI
Mhudiblu_PPA_v0837,336,698 - 37,362,768 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034821838 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000027162.1
RefSeq Acc Id: XP_034821838   ⟸   XM_034965947
- UniProtKB: A0A2R9BDD2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000027162   ⟸   ENSPPAT00000050000


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000036659 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000050000.1 UniProtKB/TrEMBL
InterPro EIF4EBP UniProtKB/TrEMBL
NCBI Gene EIF4EBP1 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN UniProtKB/TrEMBL
  PTHR12669:SF14 UniProtKB/TrEMBL
Pfam eIF_4EBP UniProtKB/TrEMBL
UniProt A0A2R9BDD2 ENTREZGENE, UniProtKB/TrEMBL