ATP6V1E2 (ATPase H+ transporting V1 subunit E2) - Rat Genome Database

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Gene: ATP6V1E2 (ATPase H+ transporting V1 subunit E2) Pan paniscus
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Symbol: ATP6V1E2
Name: ATPase H+ transporting V1 subunit E2
RGD ID: 11668660
Description: ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (inferred); INVOLVED IN proton transmembrane transport (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); FOUND IN acrosomal vesicle (inferred); proton-transporting two-sector ATPase complex, catalytic domain (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: V-type proton ATPase subunit E 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21279,847,862 - 79,878,241 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A79,851,830 - 79,882,206 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A46,627,574 - 46,658,180 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A47,558,819 - 47,589,194 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A47,559,015 - 47,559,695 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ATP6V1E2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21279,847,862 - 79,878,241 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A79,851,830 - 79,882,206 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A46,627,574 - 46,658,180 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A47,558,819 - 47,589,194 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A47,559,015 - 47,559,695 (-)Ensemblpanpan1.1panPan2
ATP6V1E2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38246,511,847 - 46,542,577 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl246,490,750 - 46,542,577 (-)EnsemblGRCh38hg38GRCh38
GRCh37246,738,986 - 46,769,716 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36246,592,490 - 46,600,600 (-)NCBINCBI36Build 36hg18NCBI36
Build 34246,650,638 - 46,658,747NCBI
Celera246,577,658 - 46,585,772 (-)NCBICelera
Cytogenetic Map2p21NCBI
HuRef246,476,563 - 46,484,674 (-)NCBIHuRef
CHM1_1246,669,331 - 46,677,438 (-)NCBICHM1_1
T2T-CHM13v2.0246,516,901 - 46,547,610 (-)NCBIT2T-CHM13v2.0
Atp6v1e2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391787,251,537 - 87,255,315 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1787,251,537 - 87,255,325 (-)EnsemblGRCm39 Ensembl
GRCm381786,944,109 - 86,947,887 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1786,944,109 - 86,947,897 (-)EnsemblGRCm38mm10GRCm38
MGSCv371787,343,449 - 87,347,227 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361786,852,435 - 86,856,213 (-)NCBIMGSCv36mm8
Celera1791,322,839 - 91,326,611 (-)NCBICelera
Cytogenetic Map17E4NCBI
cM Map1756.9NCBI
Atp6v1e2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8613,417,046 - 13,425,628 (+)NCBIGRCr8
mRatBN7.267,667,359 - 7,673,711 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl67,667,564 - 7,672,626 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx67,946,740 - 7,950,655 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.068,256,150 - 8,260,065 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.067,783,275 - 7,787,190 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0610,510,370 - 10,517,059 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl610,511,452 - 10,515,370 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0620,499,969 - 20,508,542 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4610,391,729 - 10,395,647 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1610,391,879 - 10,396,115 (-)NCBI
Celera67,403,594 - 7,407,511 (+)NCBICelera
Cytogenetic Map6q12NCBI
Atp6v1e2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544113,432,951 - 13,458,467 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544113,432,951 - 13,458,467 (-)NCBIChiLan1.0ChiLan1.0
ATP6V1E2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11048,746,331 - 48,754,047 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1048,600,601 - 48,609,203 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01049,617,392 - 49,625,990 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1049,617,575 - 49,618,255 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11049,325,448 - 49,334,035 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01049,615,682 - 49,624,276 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01049,798,781 - 49,807,379 (-)NCBIUU_Cfam_GSD_1.0
Atp6v1e2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629234,317,614 - 34,322,869 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365085,750,595 - 5,751,275 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP6V1E2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl394,032,773 - 94,033,453 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1394,012,252 - 94,078,475 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23100,097,229 - 100,118,012 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ATP6V1E2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11460,648,934 - 60,895,703 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1460,695,500 - 60,696,180 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604551,157,782 - 51,197,117 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp6v1e2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473827,975,166 - 27,980,969 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000042554   ⟹   ENSPPAP00000019778
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A47,559,015 - 47,559,695 (-)Ensembl
RefSeq Acc Id: XM_008976241   ⟹   XP_008974489
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,848,331 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,852,650 - 79,882,206 (+)NCBI
Mhudiblu_PPA_v02A46,627,574 - 46,658,180 (-)NCBI
PanPan1.12A47,558,831 - 47,588,861 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034953062   ⟹   XP_034808953
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,848,331 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,852,650 - 79,882,206 (+)NCBI
Mhudiblu_PPA_v02A46,627,574 - 46,658,180 (-)NCBI
RefSeq Acc Id: XM_034953063   ⟹   XP_034808954
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,848,331 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,852,650 - 79,882,206 (+)NCBI
Mhudiblu_PPA_v02A46,627,574 - 46,657,552 (-)NCBI
RefSeq Acc Id: XM_034953064   ⟹   XP_034808955
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,848,331 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,852,650 - 79,882,206 (+)NCBI
Mhudiblu_PPA_v02A46,627,574 - 46,657,552 (-)NCBI
RefSeq Acc Id: XM_055108013   ⟹   XP_054963988
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,848,331 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,852,650 - 79,882,206 (+)NCBI
RefSeq Acc Id: XM_055108014   ⟹   XP_054963989
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,847,862 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,851,830 - 79,882,206 (+)NCBI
RefSeq Acc Id: XM_057301316   ⟹   XP_057157299
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,848,331 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,852,727 - 79,882,206 (+)NCBI
RefSeq Acc Id: XM_057301317   ⟹   XP_057157300
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21279,847,862 - 79,878,241 (+)NCBI
NHGRI_mPanPan12A79,851,830 - 79,882,206 (+)NCBI
RefSeq Acc Id: XP_008974489   ⟸   XM_008976241
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034808953   ⟸   XM_034953062
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034808955   ⟸   XM_034953064
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034808954   ⟸   XM_034953063
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000019778   ⟸   ENSPPAT00000042554
RefSeq Acc Id: XP_054963989   ⟸   XM_055108014
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054963988   ⟸   XM_055108013
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_057157300   ⟸   XM_057301317
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_057157299   ⟸   XM_057301316
- UniProtKB: A0A2R9ARI0 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000033113 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000042554.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.2320.30 UniProtKB/TrEMBL
  6.10.250.1620 UniProtKB/TrEMBL
InterPro ATPase_E_C UniProtKB/TrEMBL
  ATPase_V1_Esu UniProtKB/TrEMBL
KEGG Report pps:100978055 UniProtKB/TrEMBL
NCBI Gene ATP6V1E2 ENTREZGENE
PANTHER PTHR45715 UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE SUBUNIT E 2 UniProtKB/TrEMBL
Pfam vATP-synt_E UniProtKB/TrEMBL
Superfamily-SCOP V-type ATPase subunit E-like UniProtKB/TrEMBL
UniProt A0A2R9ARI0 ENTREZGENE, UniProtKB/TrEMBL