Tcp1 (t-complex protein 1) - Rat Genome Database

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Gene: Tcp1 (t-complex protein 1) Mus musculus
Analyze
Symbol: Tcp1
Name: t-complex protein 1
RGD ID: 11399
MGI Page MGI
Description: Predicted to enable protein folding chaperone; ubiquitin protein ligase binding activity; and unfolded protein binding activity. Acts upstream of or within binding activity of sperm to zona pellucida. Located in several cellular components, including acrosomal vesicle; heterochromatin; and pericentriolar material. Part of chaperonin-containing T-complex and zona pellucida receptor complex. Is expressed in several structures, including cerebral cortex; extraembryonic component; genitourinary system; humerus; and immune system. Orthologous to human TCP1 (t-complex 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI528772; c-c; c-cpn; CCT; CCT-alpha; Cct1; Ccta; p6; p63; t-complex polypeptide 1; T-complex protein 1 subunit alpha; T-complex protein 1 subunit alpha A; T-complex protein 1 subunit alpha B; tailless complex polypeptide 1A; tailless complex polypeptide 1B; Tcp-; Tcp-1; TCP-1-A; TCP-1-alpha; TCP-1-B; Tp6; Tp63; TR; TRic
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm20591   Tcp1-ps1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391713,135,216 - 13,143,954 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1713,134,588 - 13,143,954 (+)EnsemblGRCm39 Ensembl
GRCm381712,916,329 - 12,925,067 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1712,915,701 - 12,925,067 (+)EnsemblGRCm38mm10GRCm38
MGSCv371713,109,331 - 13,117,933 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361712,759,446 - 12,767,497 (+)NCBIMGSCv36mm8
Celera1712,948,013 - 12,956,616 (+)NCBICelera
Cytogenetic Map17A1NCBI
cM Map178.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (EXP,ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP)
1H-pyrazole  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (ISO)
2-bromohexadecanoic acid  (ISO)
3-chloropropane-1,2-diol  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-amino-2,6-dinitrotoluene  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
albendazole  (ISO)
alpha-pinene  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bleomycin A2  (EXP)
bleomycin A5  (ISO)
bufalin  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
chlorpyrifos  (EXP)
chromium(6+)  (EXP,ISO)
cisplatin  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
corticosterone  (ISO)
coumarin  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dinophysistoxin 1  (ISO)
dioxygen  (EXP)
disulfiram  (ISO)
elemental selenium  (ISO)
enzyme inhibitor  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
etoposide  (EXP)
fenofibrate  (ISO)
finasteride  (ISO)
flavonoids  (ISO)
flutamide  (ISO)
folic acid  (EXP)
folpet  (EXP)
FR900359  (ISO)
furfural  (ISO)
gentamycin  (ISO)
hyaluronic acid  (ISO)
hydrogen peroxide  (ISO)
ivermectin  (ISO)
lead(0)  (ISO)
lovastatin  (EXP)
methimazole  (ISO)
methotrexate  (EXP)
Monobutylphthalate  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
naphthalene  (EXP)
nefazodone  (ISO)
nimesulide  (ISO)
Nonylphenol  (ISO)
okadaic acid  (ISO)
ozone  (EXP,ISO)
paracetamol  (ISO)
parathion  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
PhIP  (ISO)
pirinixic acid  (EXP,ISO)
quartz  (ISO)
raloxifene  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium chloride  (ISO)
sodium dichromate  (ISO)
T-2 toxin  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
thiram  (ISO)
Tributyltin oxide  (EXP)
trichloroethene  (EXP,ISO)
trimellitic anhydride  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
warfarin  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)
zoledronic acid  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Extent of the mouse t complex and its inversions shown by in situ hybridization. Lyon MF, etal., Immunogenetics 1988;27(5):375-82.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Genetic maps of mouse chromosome 17 including 12 new anonymous DNA loci and 25 anchor loci. Nadeau JH, etal., Genomics 1991 Jan;9(1):78-89.
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Linkage map of mouse chromosome 17: localization of 27 new DNA markers. Vincek V, etal., Genomics 1989 Nov;5(4):773-86.
7. Molecular cloning and sequence analysis of a haploid expressed gene encoding t complex polypeptide 1. Willison KR, etal., Cell 1986 Mar 14;44(5):727-38.
8. Chromosomal assignments of 17 structural genes and 11 related DNA fragments in rats (Rattus norvegicus) by Southern blot analysis of rat x mouse somatic cell hybrid clones. Yasue M, etal., Genomics 1992 Apr;12(4):659-64.
Additional References at PubMed
PMID:455464   PMID:1347473   PMID:1383093   PMID:1495973   PMID:1543916   PMID:1572657   PMID:1612602   PMID:1628813   PMID:1677769   PMID:1686571   PMID:1799792   PMID:1845916  
PMID:1936961   PMID:1937024   PMID:1991558   PMID:2055458   PMID:2076813   PMID:2165966   PMID:2377466   PMID:2569442   PMID:2570638   PMID:2655925   PMID:2717616   PMID:2902634  
PMID:3455895   PMID:3653076   PMID:3744436   PMID:6321339   PMID:6684996   PMID:6825938   PMID:6934533   PMID:7327391   PMID:7601114   PMID:7665164   PMID:7828721   PMID:7849408  
PMID:7904580   PMID:7953530   PMID:8001976   PMID:8812459   PMID:8835526   PMID:8854860   PMID:8903730   PMID:9250675   PMID:9268631   PMID:9880236   PMID:10349636   PMID:10561509  
PMID:10748209   PMID:10765561   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11163258   PMID:11217851   PMID:11387227   PMID:11641723   PMID:11747081   PMID:12466851   PMID:12477932  
PMID:12520002   PMID:12904583   PMID:12915127   PMID:14610273   PMID:14691545   PMID:15317747   PMID:15339983   PMID:15489334   PMID:15618518   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:17110338   PMID:17309103   PMID:17634366   PMID:17967808   PMID:18287559   PMID:18307411   PMID:18799693   PMID:19521500   PMID:19552622   PMID:19684306   PMID:20852191  
PMID:21048107   PMID:21267068   PMID:21343341   PMID:21873635   PMID:21880732   PMID:22083510   PMID:22794259   PMID:23716698   PMID:24457600   PMID:24614889   PMID:24756126   PMID:24854858  
PMID:25082455   PMID:25737280   PMID:25755282   PMID:26364302   PMID:26442671   PMID:26556873   PMID:26590968   PMID:27502364   PMID:27601642   PMID:27929117   PMID:28378742   PMID:30029015  
PMID:30068389   PMID:30196744   PMID:30409884   PMID:30562941   PMID:30595499   PMID:31040226   PMID:31329595   PMID:32325033   PMID:32554809   PMID:32581705   PMID:33230847   PMID:34321999  
PMID:34600884   PMID:34896365   PMID:35449600   PMID:36114006   PMID:36293380   PMID:37142655  


Genomics

Comparative Map Data
Tcp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391713,135,216 - 13,143,954 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1713,134,588 - 13,143,954 (+)EnsemblGRCm39 Ensembl
GRCm381712,916,329 - 12,925,067 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1712,915,701 - 12,925,067 (+)EnsemblGRCm38mm10GRCm38
MGSCv371713,109,331 - 13,117,933 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361712,759,446 - 12,767,497 (+)NCBIMGSCv36mm8
Celera1712,948,013 - 12,956,616 (+)NCBICelera
Cytogenetic Map17A1NCBI
cM Map178.72NCBI
TCP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386159,778,498 - 159,789,602 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6159,778,498 - 159,789,703 (-)EnsemblGRCh38hg38GRCh38
GRCh376160,199,530 - 160,210,634 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366160,119,520 - 160,130,725 (-)NCBINCBI36Build 36hg18NCBI36
Build 346160,169,941 - 160,181,146NCBI
Celera6160,845,607 - 160,856,819 (-)NCBICelera
Cytogenetic Map6q25.3NCBI
HuRef6157,669,773 - 157,680,978 (-)NCBIHuRef
CHM1_16160,461,821 - 160,473,042 (-)NCBICHM1_1
T2T-CHM13v2.06161,024,115 - 161,035,234 (-)NCBIT2T-CHM13v2.0
Tcp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8150,376,848 - 50,384,527 (-)NCBIGRCr8
mRatBN7.2147,829,061 - 47,836,809 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl147,828,652 - 47,836,839 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx148,520,703 - 48,528,382 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,506,599 - 54,514,346 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0148,596,232 - 48,603,911 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0148,025,664 - 48,033,343 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl148,025,663 - 48,033,396 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0151,719,055 - 51,726,734 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4142,103,543 - 42,111,222 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1142,106,487 - 42,114,167 (-)NCBI
Celera143,629,524 - 43,637,203 (-)NCBICelera
RH 3.4 Map1537.31RGD
Cytogenetic Map1q11NCBI
Tcp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495543921,114,038 - 21,124,379 (+)NCBIChiLan1.0ChiLan1.0
TCP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25179,877,363 - 179,888,668 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16177,781,864 - 177,793,622 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06157,661,409 - 157,672,581 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16162,673,050 - 162,684,261 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6162,673,596 - 162,683,985 (-)Ensemblpanpan1.1panPan2
TCP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1149,029,260 - 49,038,023 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl149,029,282 - 49,038,020 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha149,871,249 - 49,879,992 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0149,213,974 - 49,222,681 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl149,213,961 - 49,222,697 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1149,096,311 - 49,105,058 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0148,967,408 - 48,976,160 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0149,582,581 - 49,591,336 (-)NCBIUU_Cfam_GSD_1.0
Tcp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946144,021,338 - 144,030,784 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648911,273,335 - 11,282,811 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TCP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl17,590,140 - 7,601,795 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.117,590,140 - 7,600,709 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.219,389,098 - 9,399,667 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TCP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11387,377,452 - 87,388,692 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1387,377,996 - 87,388,568 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604059,776,464 - 59,787,759 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tcp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248553,121,274 - 3,133,640 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tcp1
23 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1041
Count of miRNA genes:592
Interacting mature miRNAs:723
Transcripts:ENSMUST00000089024, ENSMUST00000129632, ENSMUST00000133003, ENSMUST00000134665, ENSMUST00000137289, ENSMUST00000138709, ENSMUST00000143961, ENSMUST00000147724, ENSMUST00000151287, ENSMUST00000151715
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558807Ceat1_mchronic experimental autoimmune thyroiditis 1 (mouse)Not determined171263668226401133Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142507Obrq13_mobesity resistance QTL 13 (mouse)Not determined1219832925076769Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
4141608Phl1_mprogressive hearing loss 1 (mouse)Not determined17787584329487423Mouse
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse

Markers in Region
AI528772  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381712,924,290 - 12,924,434UniSTSGRCm38
MGSCv371713,117,156 - 13,117,300UniSTSGRCm37
Celera1712,955,839 - 12,955,983UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map17A1UniSTS
cM Map177.55UniSTS
Whitehead/MRC_RH17215.42UniSTS
TCP1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371713,116,124 - 13,116,527UniSTSGRCm37
Celera1712,954,807 - 12,955,210UniSTS
Cytogenetic Map17A2-A3UniSTS
Cytogenetic Map17A3-BUniSTS
cM Map177.5UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS
TCP1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381712,923,258 - 12,923,661UniSTSGRCm38
MGSCv371713,116,124 - 13,116,527UniSTSGRCm37
Celera1712,954,807 - 12,955,210UniSTS
Cytogenetic Map17A3-BUniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001290712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_013686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB844061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB844105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB846828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK199928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL589878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN725473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D10606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D90344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M12899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M20130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S46763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000089024   ⟹   ENSMUSP00000086418
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,216 - 13,143,443 (+)Ensembl
GRCm38.p6 Ensembl1712,916,329 - 12,924,556 (+)Ensembl
Ensembl Acc Id: ENSMUST00000129632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,336 - 13,143,449 (+)Ensembl
GRCm38.p6 Ensembl1712,916,449 - 12,924,562 (+)Ensembl
Ensembl Acc Id: ENSMUST00000133003
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,336 - 13,139,115 (+)Ensembl
GRCm38.p6 Ensembl1712,916,449 - 12,920,228 (+)Ensembl
Ensembl Acc Id: ENSMUST00000134665
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,138,560 - 13,139,527 (+)Ensembl
GRCm38.p6 Ensembl1712,919,673 - 12,920,640 (+)Ensembl
Ensembl Acc Id: ENSMUST00000137289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,139,168 - 13,140,035 (+)Ensembl
GRCm38.p6 Ensembl1712,920,281 - 12,921,148 (+)Ensembl
Ensembl Acc Id: ENSMUST00000138709
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,139,004 - 13,141,619 (+)Ensembl
GRCm38.p6 Ensembl1712,920,117 - 12,922,732 (+)Ensembl
Ensembl Acc Id: ENSMUST00000143961   ⟹   ENSMUSP00000116511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,326 - 13,137,266 (+)Ensembl
GRCm38.p6 Ensembl1712,916,439 - 12,918,379 (+)Ensembl
Ensembl Acc Id: ENSMUST00000147724
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,134,588 - 13,137,001 (+)Ensembl
GRCm38.p6 Ensembl1712,915,701 - 12,918,114 (+)Ensembl
Ensembl Acc Id: ENSMUST00000151287   ⟹   ENSMUSP00000116108
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,269 - 13,143,954 (+)Ensembl
GRCm38.p6 Ensembl1712,916,382 - 12,925,067 (+)Ensembl
Ensembl Acc Id: ENSMUST00000151715
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,362 - 13,138,445 (+)Ensembl
GRCm38.p6 Ensembl1712,916,475 - 12,919,558 (+)Ensembl
Ensembl Acc Id: ENSMUST00000233286   ⟹   ENSMUSP00000156966
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,135,329 - 13,137,419 (+)Ensembl
GRCm38.p6 Ensembl1712,916,442 - 12,918,532 (+)Ensembl
Ensembl Acc Id: ENSMUST00000233345
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1713,138,490 - 13,139,753 (+)Ensembl
GRCm38.p6 Ensembl1712,919,603 - 12,920,866 (+)Ensembl
RefSeq Acc Id: NM_001290712   ⟹   NP_001277641
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391713,135,216 - 13,143,954 (+)NCBI
GRCm381712,916,329 - 12,925,067 (+)NCBI
Celera1712,947,877 - 12,956,616 (+)NCBI
Sequence:
RefSeq Acc Id: NM_013686   ⟹   NP_038714
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391713,135,216 - 13,143,954 (+)NCBI
GRCm381712,916,329 - 12,925,067 (+)NCBI
MGSCv371713,109,331 - 13,117,933 (+)RGD
Celera1712,947,877 - 12,956,616 (+)NCBI
cM Map17 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001277641 (Get FASTA)   NCBI Sequence Viewer  
  NP_038714 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA40337 (Get FASTA)   NCBI Sequence Viewer  
  AAA40338 (Get FASTA)   NCBI Sequence Viewer  
  AAB23855 (Get FASTA)   NCBI Sequence Viewer  
  AAH03809 (Get FASTA)   NCBI Sequence Viewer  
  BAA01461 (Get FASTA)   NCBI Sequence Viewer  
  BAA14356 (Get FASTA)   NCBI Sequence Viewer  
  BAE28989 (Get FASTA)   NCBI Sequence Viewer  
  BAE29063 (Get FASTA)   NCBI Sequence Viewer  
  BAE30084 (Get FASTA)   NCBI Sequence Viewer  
  BAE30407 (Get FASTA)   NCBI Sequence Viewer  
  BAE31381 (Get FASTA)   NCBI Sequence Viewer  
  BAE31988 (Get FASTA)   NCBI Sequence Viewer  
  BAE38327 (Get FASTA)   NCBI Sequence Viewer  
  BAE39052 (Get FASTA)   NCBI Sequence Viewer  
  BAE39149 (Get FASTA)   NCBI Sequence Viewer  
  BAE39599 (Get FASTA)   NCBI Sequence Viewer  
  BAO48049 (Get FASTA)   NCBI Sequence Viewer  
  CAA43525 (Get FASTA)   NCBI Sequence Viewer  
  CAA43526 (Get FASTA)   NCBI Sequence Viewer  
  CAA43527 (Get FASTA)   NCBI Sequence Viewer  
  CAA43528 (Get FASTA)   NCBI Sequence Viewer  
  CAA43529 (Get FASTA)   NCBI Sequence Viewer  
  CAA43530 (Get FASTA)   NCBI Sequence Viewer  
  CAA43531 (Get FASTA)   NCBI Sequence Viewer  
  CAA43532 (Get FASTA)   NCBI Sequence Viewer  
  CAA43533 (Get FASTA)   NCBI Sequence Viewer  
  CAA43534 (Get FASTA)   NCBI Sequence Viewer  
  CAA43535 (Get FASTA)   NCBI Sequence Viewer  
  EDL02035 (Get FASTA)   NCBI Sequence Viewer  
  EDL02036 (Get FASTA)   NCBI Sequence Viewer  
  EDL02037 (Get FASTA)   NCBI Sequence Viewer  
  EDL02038 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000086418
  ENSMUSP00000086418.7
  ENSMUSP00000116108
  ENSMUSP00000116108.2
  ENSMUSP00000116511.2
  ENSMUSP00000156966.2
GenBank Protein P11983 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_038714   ⟸   NM_013686
- Peptide Label: isoform 1
- UniProtKB: Q3UB80 (UniProtKB/Swiss-Prot),   Q3UAA8 (UniProtKB/Swiss-Prot),   Q3U7I8 (UniProtKB/Swiss-Prot),   Q3U5T8 (UniProtKB/Swiss-Prot),   Q3TKU1 (UniProtKB/Swiss-Prot),   Q3TJ96 (UniProtKB/Swiss-Prot),   P11984 (UniProtKB/Swiss-Prot),   Q3UE48 (UniProtKB/Swiss-Prot),   P11983 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001277641   ⟸   NM_001290712
- Peptide Label: isoform 2
- UniProtKB: P11983 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000116511   ⟸   ENSMUST00000143961
Ensembl Acc Id: ENSMUSP00000116108   ⟸   ENSMUST00000151287
Ensembl Acc Id: ENSMUSP00000156966   ⟸   ENSMUST00000233286
Ensembl Acc Id: ENSMUSP00000086418   ⟸   ENSMUST00000089024

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P11983-F1-model_v2 AlphaFold P11983 1-556 view protein structure

Promoters
RGD ID:13674764
Promoter ID:EPDNEW_M21531
Type:initiation region
Name:Tcp1_1
Description:Mus musculus t-complex protein 1 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381712,916,465 - 12,916,525EPDNEW
RGD ID:6828788
Promoter ID:MM_KWN:22130
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Lung,   MEF_B4,   MEF_B6
Transcripts:OTTMUST00000069571,   OTTMUST00000069574,   OTTMUST00000069576,   OTTMUST00000069577,   UC008ALK.1,   UC008ALM.1,   UC008ALN.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361713,109,101 - 13,109,601 (+)MPROMDB
RGD ID:6828790
Promoter ID:MM_KWN:22131
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:ENSMUST00000083171,   OTTMUST00000069578,   OTTMUST00000069579,   OTTMUST00000069580
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361713,112,536 - 13,113,137 (+)MPROMDB
RGD ID:6847467
Promoter ID:MM_ACW:21721
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:TCP1.KSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361713,116,306 - 13,117,157 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:98535 AgrOrtholog
Ensembl Genes ENSMUSG00000068039 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000089024 ENTREZGENE
  ENSMUST00000089024.13 UniProtKB/Swiss-Prot
  ENSMUST00000143961.2 UniProtKB/TrEMBL
  ENSMUST00000151287 ENTREZGENE
  ENSMUST00000151287.8 UniProtKB/Swiss-Prot
  ENSMUST00000233286.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.560.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.260.10 UniProtKB/Swiss-Prot
  3.50.7.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Chap_CCT_alpha UniProtKB/Swiss-Prot
  Chaperone_TCP-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Chaperonin_TCP-1_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cpn60/TCP-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GroEL-like_apical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GROEL-like_equatorial_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TCP-1-like_intermed_sf UniProtKB/Swiss-Prot
  TCP-1_chaperonin UniProtKB/Swiss-Prot
  thermosome_alpha UniProtKB/Swiss-Prot
KEGG Report mmu:21454 UniProtKB/Swiss-Prot
MGD MGI:98535 ENTREZGENE
NCBI Gene 21454 ENTREZGENE
PANTHER PTHR11353 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Cpn60_TCP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tcp1 PhenoGen
PRINTS TCOMPLEXTCP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE TCP1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TCP1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TCP1_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48592 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52029 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54849 UniProtKB/Swiss-Prot
UniProt A0A3B2WDE2_MOUSE UniProtKB/TrEMBL
  F2Z483_MOUSE UniProtKB/TrEMBL
  P11983 ENTREZGENE
  P11984 ENTREZGENE
  Q3TJ96 ENTREZGENE
  Q3TKU1 ENTREZGENE
  Q3U5T8 ENTREZGENE
  Q3U7I8 ENTREZGENE
  Q3UAA8 ENTREZGENE
  Q3UB80 ENTREZGENE
  Q3UE48 ENTREZGENE
  TCPA_MOUSE UniProtKB/Swiss-Prot
  W0TYI4_MOUSE UniProtKB/TrEMBL
UniProt Secondary P11984 UniProtKB/Swiss-Prot
  Q3TJ96 UniProtKB/Swiss-Prot
  Q3TKU1 UniProtKB/Swiss-Prot
  Q3U5T8 UniProtKB/Swiss-Prot
  Q3U7I8 UniProtKB/Swiss-Prot
  Q3UAA8 UniProtKB/Swiss-Prot
  Q3UB80 UniProtKB/Swiss-Prot
  Q3UE48 UniProtKB/Swiss-Prot