Gene: Ccdc194 (coiled-coil domain containing 194) Rattus norvegicus
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Symbol:
Ccdc194
Name:
coiled-coil domain containing 194
RGD ID:
11373735
Description:
Orthologous to human CCDC194 (coiled-coil domain containing 194); INTERACTS WITH aristolochic acid A (ortholog); bis(2-ethylhexyl) phthalate (ortholog); ethylparaben (ortholog).
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
coiled-coil domain-containing protein 194; LOC108353095; uncharacterized LOC108353095; uncharacterized protein LOC108353095
RGD Orthologs
Alliance Orthologs
More Info
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More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 18,239,080 - 18,243,600 (-) NCBI GRCr8 mRatBN7.2 16 18,205,099 - 18,209,310 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 18,205,095 - 18,209,283 (-) Ensembl mRatBN7.2 Ensembl Rnor_6.0 16 19,926,481 - 19,930,570 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Celera 16 18,410,056 - 18,414,145 (-) NCBI Celera Cytogenetic Map 16 p14 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Genomics
Comparative Map Data
Ccdc194 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 16 18,239,080 - 18,243,600 (-) NCBI GRCr8 mRatBN7.2 16 18,205,099 - 18,209,310 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 16 18,205,095 - 18,209,283 (-) Ensembl mRatBN7.2 Ensembl Rnor_6.0 16 19,926,481 - 19,930,570 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Celera 16 18,410,056 - 18,414,145 (-) NCBI Celera Cytogenetic Map 16 p14 NCBI
CCDC194 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 17,387,196 - 17,394,196 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 17,387,196 - 17,394,196 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 19 17,498,005 - 17,505,005 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Cytogenetic Map 19 p13.11 NCBI T2T-CHM13v2.0 19 17,521,944 - 17,528,920 (-) NCBI T2T-CHM13v2.0
Ccdc194 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 8 71,972,762 - 71,978,369 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 8 71,972,764 - 71,978,355 (-) Ensembl GRCm39 Ensembl GRCm38 8 71,520,118 - 71,525,725 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 8 71,520,120 - 71,525,711 (-) Ensembl GRCm38 mm10 GRCm38 Celera 8 74,030,387 - 74,038,131 (-) NCBI Celera Cytogenetic Map 8 B3.3 NCBI
CCDC194 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 22,260,630 - 22,273,248 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 21,265,153 - 21,279,808 (-) NCBI NHGRI_mPanPan1
LOC102155151 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 20 45,392,460 - 45,395,513 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 20 45,392,103 - 45,395,187 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 20 45,305,641 - 45,307,495 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 20 45,879,105 - 45,880,966 (+) NCBI ROS_Cfam_1.0 UMICH_Zoey_3.1 20 45,115,497 - 45,117,351 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 20 45,525,368 - 45,527,222 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 20 45,801,169 - 45,803,019 (+) NCBI UU_Cfam_GSD_1.0
QTLs in Region (GRCr8)
631561 Hcuc2 Hepatic copper content QTL 2 2.8 liver copper amount (VT:0003065) liver total copper weight (CMO:0001507) 16 1 39533949 Rat 1582235 Insul8 Insulin level QTL 8 3.3 0.0063 blood insulin amount (VT:0001560) calculated serum insulin level (CMO:0000359) 16 1 26727669 Rat 2307172 Activ4 Activity QTL 4 3.71 0.00023 locomotor behavior trait (VT:0001392) number of entries into a discrete space in an experimental apparatus (CMO:0000960) 16 1 33418960 Rat 1354584 Despr6 Despair related QTL 6 3.1 0.0067 locomotor behavior trait (VT:0001392) amount of time spent in voluntary immobility (CMO:0001043) 16 1 39533930 Rat 2302380 Slep6 Serum leptin concentration QTL 6 3.36 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 16 1 32139025 Rat 737819 Hcas4 Hepatocarcinoma susceptibility QTL 4 4.43 liver integrity trait (VT:0010547) volume of individual liver tumorous lesion (CMO:0001078) 16 4227609 46975965 Rat 631517 Scl9 Serum cholesterol level QTL 9 3.3 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 16 15726433 21034895 Rat 9590151 Scort8 Serum corticosterone level QTL 8 8.45 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 16 1 30836262 Rat 1354625 Despr7 Despair related QTL 7 3.16 0.016 locomotor behavior trait (VT:0001392) amount of time spent in voluntary immobility (CMO:0001043) 16 1 44977551 Rat 61338 Bp23 Blood pressure QTL 23 4.3 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 16 4227609 49227609 Rat 61405 Niddm6 Non-insulin dependent diabetes mellitus QTL 6 3.66 0.001 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 16 4227609 48972724 Rat 631830 Alc7 Alcohol consumption QTL 7 2.9 consumption behavior trait (VT:0002069) ethanol drink intake rate (CMO:0001407) 16 1 26727669 Rat 7411664 Foco30 Food consumption QTL 30 11 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 16 1 44588133 Rat 1600378 Arunc4 Aerobic running capacity QTL 4 0.03 exercise endurance trait (VT:0002332) maximum distance run on treadmill (CMO:0001406) 16 380245 80345693 Rat 70183 BpQTLcluster13 Blood pressure QTL cluster 13 3.654 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 16 4227609 43025077 Rat 1600369 Hcas8 Hepatocarcinoma susceptibility QTL 8 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 16 1 22477621 Rat 737826 Alc11 Alcohol consumption QTL 11 3.2 consumption behavior trait (VT:0002069) ethanol drink intake rate (CMO:0001407) 16 4227609 60252231 Rat 2303566 Bw90 Body weight QTL 90 2 body mass (VT:0001259) body weight (CMO:0000012) 16 1 39533930 Rat 2312663 Slep9 Serum leptin concentration QTL 9 0.001 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 16 832236 59492508 Rat 2306902 Bp339 Blood pressure QTL 339 0.01 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 16 3380150 43025077 Rat 1300133 Rf24 Renal function QTL 24 3.64 blood creatinine amount (VT:0005328) creatinine clearance (CMO:0000765) 16 3380150 21361552 Rat 2312660 Bw95 Body weight QTL 95 0.05 inguinal fat pad mass (VT:0010424) inguinal fat pad weight to body weight ratio (CMO:0001253) 16 832236 59492508 Rat 2312666 Insul16 Insulin level QTL 16 0.01 blood insulin amount (VT:0001560) serum insulin level (CMO:0000358) 16 832236 59492508 Rat 634355 Rends4 Renal damage susceptibility QTL 4 0.05 kidney blood vessel morphology trait (VT:0000530) organ lesion measurement (CMO:0000677) 16 1 26727669 Rat 70205 Gcr3 Gastric cancer resistance QTL 3 2.3 stomach morphology trait (VT:0000470) stomach tumor diameter (CMO:0001889) 16 17696791 82635055 Rat 2293343 Glom16 Glomerulus QTL 16 7.4 kidney glomerulus integrity trait (VT:0010546) kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269) 16 832236 46053497 Rat 6903319 Bw114 Body weight QTL 114 2.7 0.0037 body mass (VT:0001259) body weight (CMO:0000012) 16 1 43534949 Rat 2312669 Stl23 Serum triglyceride level QTL 23 0.01 blood triglyceride amount (VT:0002644) serum triglyceride level (CMO:0000360) 16 832236 59492508 Rat