Rgn (regucalcin) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Rgn (regucalcin) Mus musculus
Analyze
Symbol: Rgn
Name: regucalcin
RGD ID: 11237
MGI Page MGI
Description: Enables gluconolactonase activity. Involved in L-ascorbic acid biosynthetic process. Located in cytoplasm and nucleus. Is expressed in alimentary system; liver; and liver lobe. Orthologous to human RGN (regucalcin).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI265316; gluconolactonase; GNL; RC; senescence marker protein 30; SMP; SMP-30; SMP30
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X20,413,980 - 20,428,328 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX20,416,026 - 20,428,328 (+)EnsemblGRCm39 Ensembl
GRCm38X20,549,766 - 20,562,089 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX20,549,787 - 20,562,089 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X20,126,944 - 20,139,213 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X19,706,777 - 19,719,046 (+)NCBIMGSCv36mm8
CeleraX18,681,357 - 18,693,626 (+)NCBICelera
Cytogenetic MapXA1.3NCBI
cM MapX16.04NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-acetamidofluorene  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-chloropropane-1,2-diol  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
5-Hydroxythalidomide  (EXP,ISO)
aflatoxin B1  (EXP,ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
bacitracin  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (ISO)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bromobenzene  (ISO)
buta-1,3-diene  (EXP)
carbon nanotube  (EXP)
cefaloridine  (ISO)
chromium trinitrate  (EXP)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
clofibric acid  (ISO)
clotrimazole  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cycloheximide  (EXP)
cyclosporin A  (ISO)
cyproconazole  (EXP)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diallyl disulfide  (ISO)
Diallyl sulfide  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
diisopropyl fluorophosphate  (EXP)
dioscin  (EXP)
dorsomorphin  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (ISO)
flavonoids  (ISO)
fumonisin B1  (EXP)
furan  (ISO)
Hexachloro-1,3-butadiene  (ISO)
hydrazine  (ISO)
indoxyl sulfate  (ISO)
inulin  (EXP)
melatonin  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nickel dichloride  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
O-methyleugenol  (ISO)
ochratoxin A  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
pent-4-enoic acid  (ISO)
perfluorododecanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
pioglitazone  (ISO)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP,ISO)
polaprezinc  (EXP)
potassium chromate  (EXP)
potassium dichromate  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (EXP)
Propiverine  (ISO)
quercetin  (ISO)
rac-1,2-dichloropropane  (EXP)
resveratrol  (ISO)
rotenone  (ISO)
sarin  (EXP)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
Soman  (EXP)
tacrolimus hydrate  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tremolite asbestos  (EXP)
trichloroethene  (ISO)
triclosan  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
zinc sulfate  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
intracellular calcium ion homeostasis  (ISO,ISS)
kidney development  (ISO)
L-ascorbic acid biosynthetic process  (IBA,IDA,IMP)
liver development  (ISO)
liver regeneration  (ISO)
negative regulation of apoptotic process  (IEA,ISO)
negative regulation of bone development  (ISO)
negative regulation of calcium-dependent ATPase activity  (ISO)
negative regulation of cyclic-nucleotide phosphodiesterase activity  (ISO)
negative regulation of DNA biosynthetic process  (IEA,ISO)
negative regulation of DNA catabolic process  (IEA,ISO)
negative regulation of epithelial cell proliferation  (IEA,ISO)
negative regulation of flagellated sperm motility  (IEA,ISO)
negative regulation of GTPase activity  (ISO)
negative regulation of macromolecule biosynthetic process  (ISO)
negative regulation of nitric oxide biosynthetic process  (IEA,ISO)
negative regulation of protein kinase activity  (ISO)
negative regulation of protein phosphorylation  (ISO)
negative regulation of RNA biosynthetic process  (IEA,ISO)
positive regulation of ATP-dependent activity  (ISO)
positive regulation of ATPase-coupled calcium transmembrane transporter activity  (ISO)
positive regulation of fatty acid biosynthetic process  (ISO)
positive regulation of glucose metabolic process  (IEA,ISO)
positive regulation of GTPase activity  (ISO)
positive regulation of phosphatase activity  (ISO)
positive regulation of proteolysis involved in protein catabolic process  (ISO)
positive regulation of superoxide dismutase activity  (ISO)
positive regulation of triglyceride biosynthetic process  (IEA,ISO)
regulation of calcium-mediated signaling  (ISO,ISS)
spermatogenesis  (IEA,ISO)

Cellular Component
cytoplasm  (IDA)
nucleus  (IDA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Gel-based proteomics of liver cancer progression in rat. Albrethsen J, etal., Biochim Biophys Acta. 2011 Oct;1814(10):1367-76. Epub 2011 Jun 6.
2. Searching QTL by gene expression: analysis of diabesity. Brown AC, etal., BMC Genet 2005 Mar 10;6(1):12.
3. Identification of a prognostic 5-Gene expression signature for gastric cancer. Hou JY, etal., J Cancer Res Clin Oncol. 2017 Apr;143(4):619-629. doi: 10.1007/s00432-016-2324-z. Epub 2016 Dec 29.
4. Hepatic calcium-binding protein regucalcin concentration is decreased by streptozotocin-diabetic state and ethanol ingestion in rats. Isogai M, etal., Mol Cell Biochem. 1997 Mar;168(1-2):67-72.
5. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
6. MGDs mouse GO annotations MGD data from the GO Consortium
7. MGD IEA MGD IEA
8. Large-scale screen for genes controlling mammalian embryogenesis, using high-throughput gene expression analysis in mouse embryos. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
9. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
10. Mouse MP Annotation Import Pipeline RGD automated import pipeline
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Senescence marker protein 30 is up-regulated in kainate-induced hippocampal damage through ERK-mediated astrocytosis. Son TG, etal., J Neurosci Res. 2009 Oct;87(13):2890-7. doi: 10.1002/jnr.22122.
13. Hyperlipidemia is induced in regucalcin transgenic rats with increasing age. Yamaguchi M, etal., Int J Mol Med. 2004 Oct;14(4):647-51.
Additional References at PubMed
PMID:7548213   PMID:8765750   PMID:9278263   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12368201   PMID:12466851   PMID:12477932   PMID:14681479   PMID:14975739  
PMID:14989739   PMID:15251439   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16483859   PMID:16500693   PMID:16585534   PMID:16728709   PMID:16874657   PMID:18327666   PMID:18507831  
PMID:18704329   PMID:18706888   PMID:18848523   PMID:19482009   PMID:19690176   PMID:19733551   PMID:19934374   PMID:20122894   PMID:20162732   PMID:20172953   PMID:20498273   PMID:21099321  
PMID:21267068   PMID:21347421   PMID:21677750   PMID:21873635   PMID:22155581   PMID:22401958   PMID:22495180   PMID:22868942   PMID:22974214   PMID:23122412   PMID:23320823   PMID:23349732  
PMID:23385962   PMID:23629672   PMID:23708106   PMID:23723062   PMID:23755269   PMID:23933320   PMID:24032444   PMID:24292059   PMID:24391705   PMID:24704458   PMID:25311772   PMID:25394676  
PMID:26694363   PMID:26912033   PMID:27077846   PMID:27982104   PMID:28114343   PMID:28652426   PMID:28807355   PMID:29799838   PMID:30266650   PMID:30629958   PMID:30827506   PMID:30894591  
PMID:32783343   PMID:32909858   PMID:33277554   PMID:33323968   PMID:33549889   PMID:34126083   PMID:36434042   PMID:37001596  


Genomics

Comparative Map Data
Rgn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X20,413,980 - 20,428,328 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX20,416,026 - 20,428,328 (+)EnsemblGRCm39 Ensembl
GRCm38X20,549,766 - 20,562,089 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX20,549,787 - 20,562,089 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X20,126,944 - 20,139,213 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X19,706,777 - 19,719,046 (+)NCBIMGSCv36mm8
CeleraX18,681,357 - 18,693,626 (+)NCBICelera
Cytogenetic MapXA1.3NCBI
cM MapX16.04NCBI
RGN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X47,078,443 - 47,093,313 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX47,078,355 - 47,093,314 (+)EnsemblGRCh38hg38GRCh38
GRCh37X46,937,842 - 46,952,712 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X46,822,719 - 46,837,656 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X46,696,510 - 46,708,966NCBI
CeleraX51,129,720 - 51,148,035 (+)NCBICelera
Cytogenetic MapXp11.3NCBI
HuRefX44,651,176 - 44,667,384 (+)NCBIHuRef
CHM1_1X46,969,564 - 46,984,507 (+)NCBICHM1_1
T2T-CHM13v2.0X46,485,437 - 46,503,065 (+)NCBIT2T-CHM13v2.0
Rgn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X4,172,537 - 4,190,112 (-)NCBIGRCr8
mRatBN7.2X1,619,030 - 1,634,456 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX1,619,032 - 1,634,450 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX1,653,062 - 1,668,461 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X5,128,761 - 5,144,164 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X1,444,046 - 1,459,469 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X1,833,484 - 1,848,904 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX1,833,492 - 1,848,904 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X2,626,525 - 2,641,949 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X13,037,171 - 13,052,846NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX2,182,952 - 2,198,371 (-)NCBICelera
Cytogenetic MapXq11NCBI
Rgn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955516955,680 - 978,910 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955516958,416 - 978,829 (-)NCBIChiLan1.0ChiLan1.0
RGN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X48,703,675 - 48,720,753 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X48,707,048 - 48,724,130 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X39,513,135 - 39,530,188 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X47,371,225 - 47,388,881 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX47,371,226 - 47,388,881 (+)Ensemblpanpan1.1panPan2
RGN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X40,697,292 - 40,715,491 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX40,698,768 - 40,715,490 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX15,074,578 - 15,090,960 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X40,818,343 - 40,849,916 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX40,833,166 - 40,849,918 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X40,806,174 - 40,837,694 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X40,793,810 - 40,825,378 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X40,886,864 - 40,918,439 (+)NCBIUU_Cfam_GSD_1.0
Rgn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X33,032,122 - 33,050,817 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650212,872,824 - 12,891,506 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650212,872,938 - 12,891,270 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX41,726,526 - 41,749,381 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X41,725,660 - 41,749,736 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X46,902,494 - 46,926,414 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RGN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X44,282,825 - 44,299,027 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX44,285,601 - 44,299,258 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660769,539,184 - 9,555,388 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rgn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248873,883,213 - 3,899,277 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248873,881,624 - 3,900,144 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rgn
304 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:142
Count of miRNA genes:132
Interacting mature miRNAs:134
Transcripts:ENSMUST00000023832
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302195Pbwg10_mpostnatal body weight growth 10 (mouse)Not determinedX126202173Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse

Markers in Region
AI265316  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X20,561,677 - 20,561,871UniSTSGRCm38
MGSCv37X20,138,803 - 20,138,997UniSTSGRCm37
CeleraX18,693,216 - 18,693,410UniSTS
Cytogenetic MapXA1.3UniSTS
Whitehead/MRC_RHX359.27UniSTS
UniSTS:225273  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X20,561,744 - 20,561,818UniSTSGRCm38
MGSCv37X20,138,870 - 20,138,944UniSTSGRCm37
CeleraX18,693,283 - 18,693,357UniSTS
Cytogenetic MapXA1.3UniSTS
RH142290  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X20,559,401 - 20,560,048UniSTSGRCm38
MGSCv37X20,136,527 - 20,137,174UniSTSGRCm37
CeleraX18,690,940 - 18,691,587UniSTS
Cytogenetic MapXA1.3UniSTS


Sequence


Ensembl Acc Id: ENSMUST00000023832   ⟹   ENSMUSP00000023832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX20,416,026 - 20,428,328 (+)Ensembl
GRCm38.p6 EnsemblX20,549,787 - 20,562,089 (+)Ensembl
RefSeq Acc Id: NM_001418014   ⟹   NP_001404943
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X20,414,473 - 20,428,328 (+)NCBI
RefSeq Acc Id: NM_001418015   ⟹   NP_001404944
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X20,414,473 - 20,428,328 (+)NCBI
RefSeq Acc Id: NM_001418016   ⟹   NP_001404945
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X20,416,026 - 20,428,328 (+)NCBI
RefSeq Acc Id: NM_001418017   ⟹   NP_001404946
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X20,413,980 - 20,428,328 (+)NCBI
RefSeq Acc Id: NM_009060   ⟹   NP_033086
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X20,416,026 - 20,428,328 (+)NCBI
GRCm38X20,549,818 - 20,562,087 (+)NCBI
MGSCv37X20,126,944 - 20,139,213 (+)RGD
CeleraX18,681,357 - 18,693,626 (+)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NP_033086   ⟸   NM_009060
- UniProtKB: Q3UJG3 (UniProtKB/Swiss-Prot),   A2AFC8 (UniProtKB/Swiss-Prot),   Q60944 (UniProtKB/Swiss-Prot),   Q64374 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000023832   ⟸   ENSMUST00000023832
RefSeq Acc Id: NP_001404946   ⟸   NM_001418017
- UniProtKB: Q64374 (UniProtKB/Swiss-Prot),   Q3UJG3 (UniProtKB/Swiss-Prot),   A2AFC8 (UniProtKB/Swiss-Prot),   Q60944 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001404943   ⟸   NM_001418014
- UniProtKB: Q64374 (UniProtKB/Swiss-Prot),   Q3UJG3 (UniProtKB/Swiss-Prot),   A2AFC8 (UniProtKB/Swiss-Prot),   Q60944 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001404944   ⟸   NM_001418015
- UniProtKB: Q64374 (UniProtKB/Swiss-Prot),   Q3UJG3 (UniProtKB/Swiss-Prot),   A2AFC8 (UniProtKB/Swiss-Prot),   Q60944 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001404945   ⟸   NM_001418016
- UniProtKB: Q64374 (UniProtKB/Swiss-Prot),   Q3UJG3 (UniProtKB/Swiss-Prot),   A2AFC8 (UniProtKB/Swiss-Prot),   Q60944 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q64374-F1-model_v2 AlphaFold Q64374 1-299 view protein structure

Promoters
RGD ID:6846265
Promoter ID:MM_KWN:59730
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000041365
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X20,126,741 - 20,127,241 (+)MPROMDB
RGD ID:6849286
Promoter ID:MM_XEF:7792
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:NM_001141394
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X20,129,391 - 20,129,891 (+)MPROMDB
RGD ID:13680176
Promoter ID:EPDNEW_M24238
Type:multiple initiation site
Name:Rgn_1
Description:Mus musculus regucalcin , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X20,549,787 - 20,549,847EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108024 AgrOrtholog
Ensembl Genes ENSMUSG00000023070 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000023832 ENTREZGENE
  ENSMUST00000023832.7 UniProtKB/Swiss-Prot
Gene3D-CATH 2.120.10.30 UniProtKB/Swiss-Prot
InterPro 6-blade_b-propeller_TolB-like UniProtKB/Swiss-Prot
  Regucalcin UniProtKB/Swiss-Prot
  SGL UniProtKB/Swiss-Prot
  SMP-30 UniProtKB/Swiss-Prot
KEGG Report mmu:19733 UniProtKB/Swiss-Prot
MGD MGI:108024 ENTREZGENE
NCBI Gene 19733 ENTREZGENE
PANTHER REGUCALCIN UniProtKB/Swiss-Prot
  REGUCALCIN UniProtKB/Swiss-Prot
Pfam SGL UniProtKB/Swiss-Prot
PhenoGen Rgn PhenoGen
PRINTS REGUCALCIN UniProtKB/Swiss-Prot
  SMP30FAMILY UniProtKB/Swiss-Prot
Superfamily-SCOP Calcium-dependent phosphotriesterase UniProtKB/Swiss-Prot
UniProt A2AFC8 ENTREZGENE
  Q3UJG3 ENTREZGENE
  Q60944 ENTREZGENE
  Q64374 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A2AFC8 UniProtKB/Swiss-Prot
  Q3UJG3 UniProtKB/Swiss-Prot
  Q60944 UniProtKB/Swiss-Prot