Ntrk2 (neurotrophic tyrosine kinase, receptor, type 2) - Rat Genome Database

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Gene: Ntrk2 (neurotrophic tyrosine kinase, receptor, type 2) Mus musculus
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Symbol: Ntrk2
Name: neurotrophic tyrosine kinase, receptor, type 2
RGD ID: 11023
MGI Page MGI
Description: Enables brain-derived neurotrophic factor binding activity and brain-derived neurotrophic factor receptor activity. Involved in several processes, including brain-derived neurotrophic factor receptor signaling pathway; modulation of chemical synaptic transmission; and nervous system development. Acts upstream of or within several processes, including neurogenesis; neuronal action potential propagation; and positive regulation of peptidyl-serine phosphorylation. Located in several cellular components, including early endosome; postsynaptic density; and terminal bouton. Is expressed in several structures, including alimentary system; future brain; genitourinary system; integumental system; and nervous system. Human ortholog(s) of this gene implicated in several diseases, including alcohol dependence; autistic disorder; developmental and epileptic encephalopathy 58; heroin dependence; and morbid obesity. Orthologous to human NTRK2 (neurotrophic receptor tyrosine kinase 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI848316; BDNF/NT-3 growth factors receptor; C030027L06Rik; GP145-TrkB/GP95-TrkB; neurotrophic tyrosine kinase receptor type 2; neurotrophic tyrosine receptor kinase type 2; Tkr; Tkrb; trk; trk-B; trkB; trkB tyrosine kinase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391358,954,363 - 59,281,782 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1358,954,383 - 59,281,784 (+)EnsemblGRCm39 Ensembl
GRCm381358,806,472 - 59,133,970 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1358,806,569 - 59,133,970 (+)EnsemblGRCm38mm10GRCm38
MGSCv371358,907,957 - 59,231,337 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361358,816,219 - 59,139,599 (+)NCBIMGSCv36mm8
Celera1359,869,829 - 60,184,466 (+)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1331.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
alcohol dependence  (ISO)
alcohol use disorder  (IDA,ISO)
alcohol withdrawal syndrome  (ISO)
Alcohol-Related Disorders  (ISO)
Alcoholic Intoxication  (IEP)
Alzheimer's disease  (IDA,ISO)
amphetamine abuse  (IDA,ISO)
Anhedonia  (ISO)
anxiety disorder  (IMP,ISO)
attention deficit hyperactivity disorder  (ISO)
autism spectrum disorder  (ISO)
autistic disorder  (ISO)
bacterial meningitis  (IEP)
bipolar disorder  (ISO)
borna disease  (ISO)
cannabis abuse  (ISO)
cerebral infarction  (ISO)
Charcot-Marie-Tooth disease  (IMP)
Chronic Pain  (ISO)
cocaine abuse  (IEP,IMP)
cocaine dependence  (ISO)
Cocaine-Related Disorders  (ISO)
cognitive disorder  (ISO)
colitis  (ISO)
congestive heart failure  (ISO)
depressive disorder  (IEP,IGI,ISO)
developmental and epileptic encephalopathy 58  (ISO)
Developmental Disabilities  (ISO)
Developmental Disease  (ISO)
Diabetic Nephropathies  (ISO)
diabetic neuropathy  (ISO)
epilepsy  (IMP,ISO)
Escherichia Coli Infections  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Seizures  (ISO)
genetic disease  (ISO)
glaucoma  (ISO)
heroin dependence  (ISO)
high grade glioma  (ISO)
Hyperalgesia  (IMP,ISO)
Hyperkinesis  (ISO)
Hyperphagia  (ISO)
idiopathic pulmonary fibrosis  (ISO)
Inflammation  (ISO)
intestinal disease  (ISO)
Lewy body dementia  (ISO)
major depressive disorder  (ISO)
malignant astrocytoma  (ISO)
Memory Disorders  (ISO)
middle cerebral artery infarction  (ISO)
morbid obesity  (ISO)
morphine dependence  (IEP,ISO)
morphine withdrawal syndrome  (ISO)
neuroblastoma  (ISO)
nicotine dependence  (ISO)
non-arteritic anterior ischemic optic neuropathy  (IDA)
obesity  (ISO)
Obesity, Hyperphagia, and Developmental Delay  (ISO)
Oculomotor Nerve Injuries  (ISO)
opiate withdrawal syndrome  (ISO)
Optic Nerve Injuries  (ISO)
Parkinsonism  (ISO)
Pneumococcal Meningitis  (ISO)
post-traumatic stress disorder  (ISO)
Postherpetic Neuralgia  (ISO)
Postoperative Cognitive Dysfunction  (IEP,IMP,ISO)
Prenatal Exposure Delayed Effects  (ISO)
pulmonary fibrosis  (IEP)
schizophrenia  (ISO)
Spinal Cord Injuries  (ISO)
status epilepticus  (ISO)
Stroke  (ISO)
Subarachnoid Hemorrhage  (ISO)
temporal lobe epilepsy  (ISO)
transient cerebral ischemia  (ISO)
traumatic brain injury  (ISO)
trigeminal neuralgia  (ISO)
vascular dementia  (ISO)
withdrawal disorder  (IDA)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(+)-syringaresinol beta-D-glucoside  (EXP)
(20S)-ginsenoside Rg3  (EXP,ISO)
(S)-amphetamine  (EXP)
(S)-nicotine  (EXP,ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (EXP)
1-fluoro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-nitropropanoic acid  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldrin  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-Solamarine  (EXP)
alpha-Zearalanol  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
amphotericin B  (ISO)
androgen antagonist  (ISO)
Aroclor 1254  (EXP,ISO)
arsane  (ISO)
arsanilic acid  (ISO)
arsenic atom  (ISO)
arsenous acid  (EXP,ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
buprenorphine  (ISO)
buta-1,3-diene  (EXP)
butanal  (ISO)
Butylparaben  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP)
caffeine  (ISO)
cannabidiol  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
CGS-21680  (ISO)
chlorpyrifos  (ISO)
choline  (EXP)
citalopram  (EXP)
Citreoviridin  (EXP)
clomipramine  (EXP)
cocaine  (EXP,ISO)
colforsin daropate hydrochloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (ISO)
curcumin  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
cypermethrin  (ISO)
cyproconazole  (EXP)
DDD  (ISO)
DDE  (ISO)
DDT  (ISO)
deoxynivalenol  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (EXP,ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
dieldrin  (ISO)
dioxygen  (ISO)
disodium selenite  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
echinacoside  (ISO)
endrin  (ISO)
entinostat  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
ethanol  (EXP,ISO)
fenvalerate  (EXP,ISO)
fipronil  (ISO)
flavonoids  (ISO)
fluoxetine  (EXP,ISO)
folic acid  (EXP)
gamma-hexachlorocyclohexane  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glyphosate  (EXP)
graphite  (ISO)
heroin  (ISO)
homocysteine  (ISO)
hydrogen peroxide  (EXP,ISO)
imidacloprid  (ISO)
imipramine  (EXP)
indometacin  (ISO)
inulin  (EXP)
isotretinoin  (ISO)
kainic acid  (ISO)
ketamine  (EXP,ISO)
L-ascorbic acid  (EXP)
L-methionine  (EXP)
lead diacetate  (ISO)
lead(0)  (ISO)
linuron  (ISO)
lipopolysaccharide  (EXP)
lycopene  (ISO)
malathion  (ISO)
maneb  (EXP)
manganese(II) chloride  (EXP)
melatonin  (EXP)
melittin  (EXP)
metformin  (ISO)
methamphetamine  (EXP)
methapyrilene  (ISO)
methimazole  (ISO)
methoxychlor  (ISO)
methylglyoxal  (ISO)
methyllycaconitine  (ISO)
methylmercury chloride  (EXP)
methylphenidate  (ISO)
mifepristone  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
morin  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-acetyl-L-cysteine  (EXP,ISO)
N-ethyl-N-nitrosourea  (ISO)
naphthalene  (EXP)
naphthalenes  (ISO)
nickel atom  (ISO)
nicotine  (EXP,ISO)
nicotinic acid  (ISO)
Nonylphenol  (EXP,ISO)
oleuropein  (EXP)
papaverine  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
Phenelzine  (EXP)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
physostigmine  (EXP)
pirinixic acid  (EXP)
ponatinib  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
prochloraz  (ISO)
procymidone  (ISO)
Ptaquiloside  (EXP)
quartz  (EXP)
reboxetine  (EXP)
reserpine  (EXP)
rivastigmine  (ISO)
rolipram  (EXP,ISO)
rotenone  (EXP,ISO)
sarin  (ISO)
SB 431542  (ISO)
scopolamine  (EXP,ISO)
sevoflurane  (EXP)
simvastatin  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium dodecyl sulfate  (ISO)
sodium fluoride  (ISO)
Soman  (ISO)
sterigmatocystin  (ISO)
streptozocin  (EXP,ISO)
sulfadimethoxine  (ISO)
sulforaphane  (ISO)
T-2 toxin  (ISO)
tacrine  (EXP)
tamibarotene  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (ISO)
Tetrachlorobisphenol A  (ISO)
titanium dioxide  (EXP)
toluene  (EXP)
tranylcypromine  (ISO)
trichloroethene  (ISO)
triclosan  (ISO)
trimellitic anhydride  (EXP)
undecane  (ISO)
valproic acid  (EXP,ISO)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
WIN 55212-2  (EXP)
zalcitabine  (ISO)
zinc atom  (EXP,ISO)
zinc(0)  (EXP,ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
brain-derived neurotrophic factor receptor signaling pathway  (IDA,IMP,ISO)
cell surface receptor protein tyrosine kinase signaling pathway  (IBA)
cellular response to amino acid stimulus  (IDA)
cellular response to brain-derived neurotrophic factor stimulus  (IBA,ISO)
cellular response to nerve growth factor stimulus  (ISO)
cellular response to tumor necrosis factor  (ISO)
central nervous system neuron development  (IMP)
cerebral cortex development  (IMP)
chromatin remodeling  (IEA)
circadian rhythm  (IEP)
collagen-activated tyrosine kinase receptor signaling pathway  (IEA)
ephrin receptor signaling pathway  (IEA)
epidermal growth factor receptor signaling pathway  (IEA)
feeding behavior  (IMP)
fibroblast growth factor receptor signaling pathway  (IEA)
glutamate secretion  (IPI)
hepatocyte growth factor receptor signaling pathway  (IEA)
insulin receptor signaling pathway  (IEA)
insulin-like growth factor receptor signaling pathway  (IEA)
Kit signaling pathway  (IEA)
learning  (IMP)
long-term memory  (ISO)
long-term synaptic potentiation  (IMP)
macrophage colony-stimulating factor signaling pathway  (IEA)
mechanoreceptor differentiation  (IMP)
myelination in peripheral nervous system  (IGI)
negative regulation of amyloid-beta formation  (IEA,ISO)
negative regulation of anoikis  (IDA)
negative regulation of apoptotic process  (ISO)
negative regulation of neuron apoptotic process  (ISO,ISS)
neuron differentiation  (IMP)
neuron migration  (IMP)
neuronal action potential propagation  (IGI)
neurotrophin signaling pathway  (IEA)
oligodendrocyte differentiation  (IMP)
peptidyl-serine phosphorylation  (IMP)
peripheral nervous system neuron development  (IMP)
platelet-derived growth factor receptor-alpha signaling pathway  (IEA)
platelet-derived growth factor receptor-beta signaling pathway  (IEA)
positive regulation of axonogenesis  (ISO,ISS)
positive regulation of cell population proliferation  (ISO,ISS)
positive regulation of excitatory postsynaptic potential  (ISO)
positive regulation of gene expression  (IMP)
positive regulation of long-term synaptic depression  (ISO)
positive regulation of MAPK cascade  (ISO,ISS)
positive regulation of neuron projection development  (IBA,IDA)
positive regulation of nuclear receptor-mediated glucocorticoid signaling pathway  (ISO)
positive regulation of peptidyl-serine phosphorylation  (IMP)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IBA,ISO,ISS)
positive regulation of synapse assembly  (IDA)
positive regulation of synaptic transmission, glutamatergic  (ISO)
protein autophosphorylation  (ISO,ISS)
regulation of cytosolic calcium ion concentration  (ISO)
regulation of dendrite development  (ISO)
regulation of MAPK cascade  (ISO)
regulation of metabolic process  (IMP)
regulation of neurotransmitter secretion  (ISO)
regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IMP)
response to auditory stimulus  (ISO)
response to ethanol  (ISO)
response to light stimulus  (ISO)
retina development in camera-type eye  (IMP)
retinal rod cell development  (IMP)
trans-synaptic signaling by BDNF, modulating synaptic transmission  (IDA,IMP)
trans-synaptic signaling by neuropeptide, modulating synaptic transmission  (IBA)
vascular endothelial growth factor receptor-1 signaling pathway  (IEA)
vascular endothelial growth factor signaling pathway  (IEA)
vasculogenesis  (IMP)

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adipose tissue distribution  (IAGP)
abnormal amygdala morphology  (IAGP)
abnormal avoidance learning behavior  (IAGP)
abnormal axon extension  (IAGP)
abnormal axon fasciculation  (IAGP)
abnormal barrel cortex morphology  (IAGP)
abnormal brain morphology  (IAGP)
abnormal breathing pattern  (IAGP)
abnormal cerebellum development  (IAGP)
abnormal cerebral cortex morphology  (IAGP)
abnormal circadian behavior  (IAGP)
abnormal circulating corticosterone level  (IAGP)
abnormal cochlear ganglion morphology  (IAGP)
abnormal cochlear nerve morphology  (IAGP)
abnormal cochlear OHC afferent innervation pattern  (IAGP)
abnormal cochlear sensory epithelium morphology  (IAGP)
abnormal contextual conditioning behavior  (IAGP)
abnormal cortical plate morphology  (IAGP)
abnormal crista ampullaris neuroepithelium morphology  (IAGP)
abnormal dendrite morphology  (IAGP)
abnormal dopaminergic neuron morphology  (IAGP)
abnormal excitatory postsynaptic potential  (IAGP)
abnormal eyelid morphology  (IAGP)
abnormal GABAergic neuron physiology  (IAGP)
abnormal gait  (IAGP)
abnormal inner ear vestibular sensory neuron innervation pattern  (IAGP)
abnormal inner ear vestibule morphology  (IAGP)
abnormal innervation  (IAGP)
abnormal learning/memory/conditioning  (IAGP)
abnormal lipid level  (IAGP)
abnormal liver morphology  (IAGP)
abnormal long-term potentiation  (IAGP)
abnormal mammary gland sensory innervation pattern  (IAGP)
abnormal mechanoreceptor morphology  (IAGP)
abnormal myelin sheath morphology  (IAGP)
abnormal myelination  (IAGP)
abnormal neuron differentiation  (IAGP)
abnormal neuron morphology  (IAGP)
abnormal neuronal migration  (IAGP)
abnormal optic nerve morphology  (IAGP)
abnormal peripheral nervous system regeneration  (IAGP)
abnormal pupillary reflex  (IAGP)
abnormal Purkinje cell dendrite morphology  (IAGP)
abnormal response to novel object  (IAGP)
abnormal retina development  (IAGP)
abnormal retina ganglion cell morphology  (IAGP)
abnormal retina rod cell outer segment morphology  (IAGP)
abnormal rib morphology  (IEA)
abnormal rod electrophysiology  (IAGP)
abnormal sensory neuron innervation pattern  (IAGP)
abnormal somatic nervous system morphology  (IAGP)
abnormal somatic sensory system morphology  (IAGP)
abnormal somatosensory cortex morphology  (IAGP)
abnormal spatial learning  (IAGP)
abnormal spatial working memory  (IAGP)
abnormal survival  (IAGP)
abnormal synapse morphology  (IAGP)
abnormal type I vestibular cell  (IAGP)
abnormal utricular macula morphology  (IAGP)
abnormal vestibular ganglion morphology  (IAGP)
abnormal vestibular labyrinth morphology  (IAGP)
abnormal vestibular nerve morphology  (IAGP)
abnormal vestibulocochlear nerve morphology  (IAGP)
abnormal vibrissae reflex  (IAGP)
abnormal vision  (IAGP)
abnormal visual cortex morphology  (IAGP)
absent hair-down neurons  (IAGP)
absent suckling reflex  (IAGP)
adrenal cortical hyperplasia  (IAGP)
astrocytosis  (IAGP)
decreased amacrine cell number  (IAGP)
decreased birth body size  (IAGP)
decreased body length  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased circulating adrenocorticotropin level  (IAGP)
decreased circulating corticosterone level  (IAGP)
decreased circulating follicle stimulating hormone level  (IAGP)
decreased dopaminergic neuron number  (IAGP)
decreased granulosa cell proliferation  (IAGP)
decreased kindling response  (IAGP)
decreased locomotor activity  (IAGP)
decreased long bone epiphyseal plate size  (IAGP)
decreased motor neuron number  (IAGP)
decreased neuron number  (IAGP)
decreased prepulse inhibition  (IEA)
decreased retina ganglion cell number  (IAGP)
decreased secondary ovarian follicle number  (IAGP)
decreased sensory neuron number  (IAGP)
decreased width of hypertrophic chondrocyte zone  (IAGP)
demyelination  (IAGP)
enhanced behavioral response to cocaine  (IAGP)
gliosis  (IAGP)
head bobbing  (IAGP)
hepatic steatosis  (IAGP)
hyperactivity  (IAGP)
impaired glucose tolerance  (IAGP)
impaired granulosa cell differentiation  (IAGP)
impaired ovarian folliculogenesis  (IAGP)
impaired righting response  (IAGP)
impaired synaptic plasticity  (IAGP)
increased abdominal fat pad weight  (IAGP)
increased adrenal gland zona fasciculata size  (IAGP)
increased aggression towards male mice  (IAGP)
increased body weight  (IAGP)
increased circulating adrenocorticotropin level  (IAGP)
increased circulating HDL cholesterol level  (IEA)
increased circulating insulin level  (IAGP)
increased circulating leptin level  (IAGP)
increased gonadal fat pad weight  (IAGP)
increased lean body mass  (IEA)
increased liver weight  (IAGP)
increased locomotor activity  (IAGP)
increased or absent distortion product otoacoustic emission threshold  (IAGP)
increased susceptibility to age related obesity  (IAGP)
increased susceptibility to dopaminergic neuron neurotoxicity  (IAGP)
increased susceptibility to weight gain  (IAGP)
increased thigmotaxis  (IAGP)
increased total body fat amount  (IAGP)
induced hyperactivity  (IAGP)
kyphosis  (IAGP)
neonatal lethality, complete penetrance  (IAGP)
neonatal lethality, incomplete penetrance  (IAGP)
neurodegeneration  (IAGP)
no abnormal phenotype detected  (IAGP)
no swallowing reflex  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
preweaning lethality, incomplete penetrance  (IEA)
reduced long-term potentiation  (IAGP)
small cochlear ganglion  (IAGP)
small dorsal root ganglion  (IAGP)
small facial motor nucleus  (IAGP)
small geniculate ganglion  (IAGP)
small L4 dorsal root ganglion  (IAGP)
small nodose ganglion  (IAGP)
small petrosal ganglion  (IAGP)
small trigeminal ganglion  (IAGP)
small vestibular ganglion  (IAGP)
spinning  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Effects of Morphine and Maternal Care on Behaviors and Protein Expression of Male Offspring. Akbarabadi A, etal., Neuroscience. 2021 Jul 1;466:58-76. doi: 10.1016/j.neuroscience.2021.04.011. Epub 2021 Apr 26.
2. A Small Molecule TrkB Neurotrophin Receptor Partial Agonist as Possible Treatment for Experimental Nonarteritic Anterior Ischemic Optic Neuropathy. Ali Shariati M, etal., Curr Eye Res. 2018 Dec;43(12):1489-1499. doi: 10.1080/02713683.2018.1508726. Epub 2018 Oct 1.
3. Association of contextual cues with morphine reward increases neural and synaptic plasticity in the ventral hippocampus of rats. Alvandi MS, etal., Addict Biol. 2017 Nov;22(6):1883-1894. doi: 10.1111/adb.12547. Epub 2017 Sep 22.
4. Neurotrophic tyrosine kinase receptor B/neurotrophin 4 signaling axis is perturbed in clinical and experimental pulmonary fibrosis. Avcuoglu S, etal., Am J Respir Cell Mol Biol. 2011 Oct;45(4):768-80. Epub 2011 Feb 17.
5. Up-regulation of high-affinity neurotrophin receptor, trk B-like protein on western blots of rat cortex after chronic ethanol treatment. Baek JK, etal., Brain Res Mol Brain Res. 1996 Aug;40(1):161-4. doi: 10.1016/0169-328x(96)00109-x.
6. An agonistic TrkB mAb causes sustained TrkB activation, delays RGC death, and protects the retinal structure in optic nerve axotomy and in glaucoma. Bai Y, etal., Invest Ophthalmol Vis Sci. 2010 Sep;51(9):4722-31. Epub 2010 Mar 31.
7. Effects of cocaine base paste on anxiety-like behavior and immediate-early gene expression in nucleus accumbens and medial prefrontal cortex of female mice. Berardino BG, etal., Psychopharmacology (Berl). 2019 Dec;236(12):3525-3539. doi: 10.1007/s00213-019-05321-0. Epub 2019 Jul 6.
8. Association of specific haplotypes of neurotrophic tyrosine kinase receptor 2 gene (NTRK2) with vulnerability to nicotine dependence in African-Americans and European-Americans. Beuten J, etal., Biol Psychiatry. 2007 Jan 1;61(1):48-55. doi: 10.1016/j.biopsych.2006.02.023. Epub 2006 May 19.
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PMID:12006576   PMID:12070090   PMID:12077195   PMID:12093746   PMID:12122447   PMID:12151767   PMID:12161017   PMID:12196573   PMID:12202482   PMID:12367511   PMID:12388556   PMID:12466851  
PMID:12477932   PMID:12532410   PMID:12552255   PMID:12601381   PMID:12646573   PMID:12654337   PMID:12676531   PMID:12703550   PMID:12774239   PMID:12796784   PMID:12798291   PMID:12810600  
PMID:12900419   PMID:12925599   PMID:12930808   PMID:14507777   PMID:14581459   PMID:14602830   PMID:14603320   PMID:14610273   PMID:14622193   PMID:14625139   PMID:14681479   PMID:14706643  
PMID:14988041   PMID:15013804   PMID:15121188   PMID:15233915   PMID:15297267   PMID:15322547   PMID:15329723   PMID:15329828   PMID:15372074   PMID:15372954   PMID:15376326   PMID:15489334  
PMID:15497153   PMID:15519679   PMID:15530548   PMID:15530873   PMID:15561438   PMID:15598981   PMID:15601948   PMID:15639186   PMID:15647480   PMID:15726425   PMID:15747579   PMID:15765148  
PMID:15781149   PMID:15820690   PMID:15829629   PMID:15829735   PMID:15836427   PMID:16009525   PMID:16037097   PMID:16115204   PMID:16141072   PMID:16141073   PMID:16142215   PMID:16183241  
PMID:16221864   PMID:16262634   PMID:16264195   PMID:16300803   PMID:16325153   PMID:16330706   PMID:16418274   PMID:16446142   PMID:16571757   PMID:16602821   PMID:16763809   PMID:16801538  
PMID:16815329   PMID:16819522   PMID:16837849   PMID:16971523   PMID:17013912   PMID:17038521   PMID:17040478   PMID:17101216   PMID:17101229   PMID:17116228   PMID:17116257   PMID:17183451  
PMID:17218417   PMID:17254333   PMID:17286628   PMID:17287360   PMID:17287506   PMID:17298183   PMID:17309801   PMID:17314919   PMID:17442456   PMID:17463037   PMID:17515902   PMID:17543035  
PMID:17553693   PMID:17584746   PMID:17594599   PMID:17611278   PMID:17616679   PMID:17880937   PMID:17940030   PMID:17940915   PMID:18045880   PMID:18063676   PMID:18086710   PMID:18187310  
PMID:18248898   PMID:18287532   PMID:18287559   PMID:18304484   PMID:18311133   PMID:18322085   PMID:18371392   PMID:18374609   PMID:18385258   PMID:18398849   PMID:18498732   PMID:18498735  
PMID:18511296   PMID:18588860   PMID:18601981   PMID:18620014   PMID:18671735   PMID:18701066   PMID:18752272   PMID:18760367   PMID:18779873   PMID:18832146   PMID:18839409   PMID:18848646  
PMID:19020035   PMID:19029029   PMID:19030180   PMID:19036963   PMID:19074010   PMID:19158294   PMID:19179431   PMID:19217934   PMID:19291307   PMID:19322198   PMID:19339612   PMID:19357131  
PMID:19361496   PMID:19403818   PMID:19429046   PMID:19521500   PMID:19523540   PMID:19603519   PMID:19631204   PMID:19675247   PMID:19707543   PMID:19735291   PMID:19741136   PMID:19755105  
PMID:19801649   PMID:19804761   PMID:19805360   PMID:19936227   PMID:20034568   PMID:20064391   PMID:20064392   PMID:20064930   PMID:20091777   PMID:20096094   PMID:20101235   PMID:20101602  
PMID:20133677   PMID:20133810   PMID:20200945   PMID:20213756   PMID:20333308   PMID:20368433   PMID:20407211   PMID:20427667   PMID:20434997   PMID:20442398   PMID:20457670   PMID:20460112  
PMID:20534675   PMID:20600640   PMID:20605779   PMID:20610380   PMID:20610389   PMID:20626560   PMID:20685990   PMID:20739478   PMID:20811452   PMID:20844136   PMID:20932311   PMID:20947769  
PMID:20955473   PMID:21038447   PMID:21047554   PMID:21102451   PMID:21117150   PMID:21192928   PMID:21195749   PMID:21205893   PMID:21220014   PMID:21246648   PMID:21267068   PMID:21272243  
PMID:21300867   PMID:21304518   PMID:21339379   PMID:21364532   PMID:21414899   PMID:21444756   PMID:21505263   PMID:21510873   PMID:21543603   PMID:21543608   PMID:21555574   PMID:21562748  
PMID:21574998   PMID:21666748   PMID:21677750   PMID:21681751   PMID:21715628   PMID:21734270   PMID:21737823   PMID:21816949   PMID:21826472   PMID:21849472   PMID:21865582   PMID:21873635  
PMID:21945863   PMID:21949401   PMID:22028026   PMID:22028443   PMID:22048155   PMID:22083603   PMID:22087873   PMID:22098391   PMID:22103411   PMID:22196735   PMID:22219288   PMID:22221196  
PMID:22226089   PMID:22232675   PMID:22253804   PMID:22302819   PMID:22304922   PMID:22318233   PMID:22326227   PMID:22331903   PMID:22345400   PMID:22389491   PMID:22393127   PMID:22396798  
PMID:22442142   PMID:22492034   PMID:22514301   PMID:22535263   PMID:22573669   PMID:22586092   PMID:22586713   PMID:22734669   PMID:22761934   PMID:22776425   PMID:22840395   PMID:22906231  
PMID:22949667   PMID:22980123   PMID:22987780   PMID:22999926   PMID:23041929   PMID:23042896   PMID:23055503   PMID:23058367   PMID:23064382   PMID:23136392   PMID:23155176   PMID:23180620  
PMID:23224557   PMID:23250006   PMID:23382219   PMID:23416450   PMID:23424281   PMID:23486965   PMID:23510469   PMID:23512795   PMID:23516305   PMID:23576617   PMID:23587649   PMID:23640807  
PMID:23642472   PMID:23652629   PMID:23701859   PMID:23761891   PMID:23763772   PMID:23774276   PMID:23776632   PMID:23785138   PMID:23790754   PMID:23843518   PMID:23878391   PMID:23884949  
PMID:23912236   PMID:23926258   PMID:23928917   PMID:23959707   PMID:23977241   PMID:24027274   PMID:24035762   PMID:24043773   PMID:24069373   PMID:24070857   PMID:24086766   PMID:24154525  
PMID:24194600   PMID:24198358   PMID:24221086   PMID:24236179   PMID:24312242   PMID:24327964   PMID:24355921   PMID:24357327   PMID:24360544   PMID:24369067   PMID:24386206   PMID:24403258  
PMID:24453327   PMID:24478370   PMID:24498100   PMID:24516396   PMID:24523535   PMID:24569481   PMID:24583017   PMID:24613359   PMID:24619096   PMID:24685135   PMID:24714156   PMID:24853771  
PMID:24877631   PMID:24952961   PMID:24961238   PMID:24982195   PMID:24991961   PMID:24992985   PMID:25052836   PMID:25124786   PMID:25127683   PMID:25131634   PMID:25256039   PMID:25288805  
PMID:25316336   PMID:25408545   PMID:25417164   PMID:25433207   PMID:25443284   PMID:25461619   PMID:25502751   PMID:25522427   PMID:25525881   PMID:25542970   PMID:25560396   PMID:25583515  
PMID:25600269   PMID:25633318   PMID:25710496   PMID:25754472   PMID:25885041   PMID:25942043   PMID:25942625   PMID:26004511   PMID:26073495   PMID:26115514   PMID:26212662   PMID:26282324  
PMID:26315459   PMID:26347138   PMID:26356988   PMID:26407640   PMID:26431274   PMID:26476348   PMID:26481038   PMID:26503042   PMID:26503133   PMID:26506052   PMID:26574547   PMID:26629410  
PMID:26630005   PMID:26653128   PMID:26687362   PMID:26712630   PMID:26758845   PMID:26839918   PMID:26857994   PMID:26858215   PMID:26988119   PMID:26992697   PMID:27076431   PMID:27263971  
PMID:27339059   PMID:27433358   PMID:27452460   PMID:27457814   PMID:27470063   PMID:27626380   PMID:27644329   PMID:27680697   PMID:27680698   PMID:27735948   PMID:27821848   PMID:28111199  
PMID:28259553   PMID:28270575   PMID:28360836   PMID:28398601   PMID:28476948   PMID:28500221   PMID:28558017   PMID:28566470   PMID:28600222   PMID:28621662   PMID:28671696   PMID:28775326  
PMID:28808012   PMID:28817805   PMID:28900083   PMID:28968898   PMID:29031500   PMID:29045838   PMID:29162814   PMID:29186135   PMID:29224725   PMID:29282324   PMID:29305158   PMID:29349576  
PMID:29379096   PMID:29540698   PMID:29569362   PMID:29580900   PMID:29726700   PMID:29881947   PMID:29976621   PMID:30013171   PMID:30022251   PMID:30071216   PMID:30089265   PMID:30126905  
PMID:30211565   PMID:30224460   PMID:30252950   PMID:30282736   PMID:30329159   PMID:30377803   PMID:30408082   PMID:30447378   PMID:30472367   PMID:30542508   PMID:30547417   PMID:30557566  
PMID:30628891   PMID:30691513   PMID:30718415   PMID:30747207   PMID:30794676   PMID:30826183   PMID:30917305   PMID:30917309   PMID:30926745   PMID:30940716   PMID:30996124   PMID:31073041  
PMID:31122677   PMID:31152445   PMID:31248728   PMID:31273936   PMID:31291586   PMID:31307481   PMID:31315045   PMID:31351040   PMID:31429825   PMID:31433295   PMID:31469911   PMID:31507374  
PMID:31541001   PMID:31568835   PMID:31574344   PMID:31631060   PMID:31801063   PMID:31941661   PMID:32265438   PMID:32277855   PMID:32325033   PMID:32327658   PMID:32361506   PMID:32430868  
PMID:32445466   PMID:32483154   PMID:32532995   PMID:32550908   PMID:32554568   PMID:32574560   PMID:32601248   PMID:32664974   PMID:32782380   PMID:32826903   PMID:32848623   PMID:32894462  
PMID:32927995   PMID:32955616   PMID:32989251   PMID:33112285   PMID:33116307   PMID:33234610   PMID:33293360   PMID:33352311   PMID:33359475   PMID:33410619   PMID:33468645   PMID:33563652  
PMID:33593856   PMID:33606976   PMID:33722956   PMID:33789102   PMID:33811383   PMID:33875572   PMID:33925507   PMID:34018923   PMID:34087694   PMID:34140411   PMID:34238051   PMID:34321412  
PMID:34321999   PMID:34360710   PMID:34407417   PMID:34493726   PMID:34611268   PMID:34638999   PMID:34668554   PMID:34789880   PMID:34851661   PMID:34932943   PMID:34948177   PMID:35152275  
PMID:35233469   PMID:35242281   PMID:35278612   PMID:35462405   PMID:35469972   PMID:35481599   PMID:35501379   PMID:35711008   PMID:35713404   PMID:35714603   PMID:35795142   PMID:35831953  
PMID:35863892   PMID:35954229   PMID:36064939   PMID:36074819   PMID:36103822   PMID:36111785   PMID:36206341   PMID:36303068   PMID:36334588   PMID:36369482   PMID:36417873   PMID:36418415  
PMID:36604605   PMID:36607273   PMID:36740741   PMID:36800849   PMID:36804547   PMID:36808153   PMID:36897066   PMID:36915149   PMID:36944718   PMID:36973009   PMID:37012514   PMID:37028432  
PMID:37106422   PMID:37252844   PMID:37277178   PMID:37495178   PMID:37503044   PMID:37506696   PMID:37541195   PMID:37551888   PMID:37607547   PMID:37651406   PMID:37670183   PMID:37725982  
PMID:37777961   PMID:37816355   PMID:38025786   PMID:38167468   PMID:38254691   PMID:38263132   PMID:38351062   PMID:38355793   PMID:38386003   PMID:38452762   PMID:38511211   PMID:38592583  
PMID:38830761   PMID:38905101   PMID:38915692   PMID:39152101   PMID:39215998   PMID:39217171   PMID:39379155  


Genomics

Comparative Map Data
Ntrk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391358,954,363 - 59,281,782 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1358,954,383 - 59,281,784 (+)EnsemblGRCm39 Ensembl
GRCm381358,806,472 - 59,133,970 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1358,806,569 - 59,133,970 (+)EnsemblGRCm38mm10GRCm38
MGSCv371358,907,957 - 59,231,337 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361358,816,219 - 59,139,599 (+)NCBIMGSCv36mm8
Celera1359,869,829 - 60,184,466 (+)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1331.2NCBI
NTRK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38984,668,522 - 85,027,054 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl984,668,375 - 85,095,751 (+)EnsemblGRCh38hg38GRCh38
GRCh37987,283,437 - 87,641,969 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36986,473,286 - 86,828,325 (+)NCBINCBI36Build 36hg18NCBI36
Build 34984,514,246 - 84,866,963NCBI
Celera957,854,390 - 58,209,019 (+)NCBICelera
Cytogenetic Map9q21.33NCBI
HuRef957,108,647 - 57,463,914 (+)NCBIHuRef
CHM1_1987,429,973 - 87,785,074 (+)NCBICHM1_1
T2T-CHM13v2.0996,818,888 - 97,177,857 (+)NCBIT2T-CHM13v2.0
Ntrk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8175,560,558 - 5,875,899 (-)NCBIGRCr8
mRatBN7.2175,558,992 - 5,870,299 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl175,559,043 - 5,869,136 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx175,584,315 - 5,894,662 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0177,120,448 - 7,429,363 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0175,580,732 - 5,891,094 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0175,934,651 - 6,245,778 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl175,933,729 - 6,244,676 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0178,156,432 - 8,464,522 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41711,494,463 - 11,811,654 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11711,494,462 - 11,811,645 (-)NCBI
Celera175,673,895 - 6,828,108 (-)NCBICelera
Cytogenetic Map17p14NCBI
Ntrk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554322,288,898 - 2,630,878 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554322,284,283 - 2,629,631 (-)NCBIChiLan1.0ChiLan1.0
NTRK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21183,829,141 - 84,374,078 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1983,835,183 - 84,380,018 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0939,663,986 - 40,208,770 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1984,022,677 - 84,378,307 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl984,021,837 - 84,372,678 (+)Ensemblpanpan1.1panPan2
NTRK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1174,447,927 - 74,777,910 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl174,449,060 - 74,777,032 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha175,211,260 - 75,538,451 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0174,754,263 - 75,081,259 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl174,755,372 - 75,083,341 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1174,562,918 - 74,890,457 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0174,331,860 - 74,658,907 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0175,035,216 - 75,362,564 (-)NCBIUU_Cfam_GSD_1.0
Ntrk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947121,116,646 - 121,472,444 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936680267,596 - 615,928 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936680267,850 - 621,467 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NTRK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1030,033,405 - 30,429,882 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11030,030,050 - 30,429,938 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21034,211,939 - 34,350,822 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NTRK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11295,477,612 - 95,836,734 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1295,479,447 - 95,620,364 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603883,830,767 - 84,200,895 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ntrk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248098,276,951 - 8,616,765 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248098,274,736 - 8,622,287 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ntrk2
11996 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3904
Count of miRNA genes:973
Interacting mature miRNAs:1430
Transcripts:ENSMUST00000079828, ENSMUST00000109838
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133614482070144904Mouse
1301015Sysbp2_msystolic blood pressure 2 (mouse)Not determined132047761259821605Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
12738439Twq4_mtestis weight QTL 4 (mouse)133112911065129110Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133610153070101640Mouse
10401111Pgia40_mproteoglycan induced arthritis 40 (mouse)Not determined132791846961918560Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
1558850Sgp3_mserum gp70 production 3 (mouse)Not determined135647045676971314Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
10755517Chol15_mcholesterol 15 (mouse)133096946764969467Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
10412163Wra1_mwheel running activity 1 (mouse)Not determined135913260093132738Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133492194368922081Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
1357553Cia28_mcollagen induced arthritis 28 (mouse)Not determined135662924996239162Mouse
4142489Ath25_matherosclerosis 25 (mouse)Not determined2583652959836529Mouse
10755533Chol18_mcholesterol 18 (mouse)133096946764969467Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse
10045621Heal21_mwound healing/regeneration 21 (mouse)Not determined132821737962217515Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
1357563Bmch6_mbone mechanical trait 6 (mouse)Not determined135538498089385140Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
1300710Pcd4ts2_mp-glycoprotein positive CD4 T cell subset 2 (mouse)Not determined132821044262210544Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133610153070101640Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse
14696729Kidlq2_mkidney weight, left QTL 2 (mouse)133134473665344736Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
1357802Vtbt15_mvertebral trabecular bone trait 15 (mouse)Not determined132821737962217515Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse

Markers in Region
AI848316  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381359,129,657 - 59,129,737UniSTSGRCm38
MGSCv371359,231,018 - 59,231,098UniSTSGRCm37
Celera1360,184,147 - 60,184,227UniSTS
Cytogenetic Map13B1-B2UniSTS
Whitehead/MRC_RH13605.61UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
cM Map1336.0UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
cM Map1336.0UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS
Ntrk2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map13B1-B2UniSTS


Expression

RNA-SEQ Expression


Sequence