Neu1 (neuraminidase 1) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Neu1 (neuraminidase 1) Mus musculus
Analyze
Symbol: Neu1
Name: neuraminidase 1
RGD ID: 10972
MGI Page MGI
Description: Enables exo-alpha-sialidase activity. Predicted to be involved in several processes, including ganglioside catabolic process; positive regulation of neuron projection development; and regulation of myoblast proliferation. Predicted to act upstream of or within carbohydrate metabolic process and lipid catabolic process. Located in lysosome. Is expressed in alimentary system; brain; intestine; midgut; and midgut loop. Used to study glycoproteinosis. Orthologous to human NEU1 (neuraminidase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A; AA407268; AA407316; Aglp; Apl; Bat; Bat-; Bat-7; Bat7; G9; G9 sialidase; HLA-B-associated transcript 7; lysosomal sialidase; Map; Map-2; N-acetyl-alpha-neuraminidase 1; Neu; Neu-; Neu-1; sialidase 1; sialidase-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,150,229 - 35,156,273 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,150,229 - 35,154,929 (+)EnsemblGRCm39 Ensembl
GRCm381734,931,253 - 34,937,297 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,931,253 - 34,935,953 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,068,198 - 35,074,242 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,539,435 - 34,543,377 (+)NCBIMGSCv36mm8
Celera1738,027,486 - 38,033,530 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.48NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-amino-14,16-dimethyloctadecan-3-ol  (ISO)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxynon-2-enal  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
butyric acid  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
cerium trichloride  (EXP)
cisplatin  (ISO)
clobetasol  (EXP)
clofibrate  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethyl methanesulfonate  (ISO)
fenthion  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gemcitabine  (ISO)
gentamycin  (ISO)
hydrogen cyanide  (EXP)
indometacin  (ISO)
isobutanol  (ISO)
leflunomide  (ISO)
Licochalcone B  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
nickel sulfate  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
perfluorooctanoic acid  (ISO)
phorone  (ISO)
pirinixic acid  (EXP)
potassium cyanide  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
rotenone  (ISO)
serpentine asbestos  (ISO)
sevoflurane  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulindac  (ISO)
sunitinib  (ISO)
tacedinaline  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
trichloroethene  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
Yessotoxin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. The SMXA: a new set of recombinant inbred strain of mice consisting of 26 substrains and their genetic profile. Nishimura M, etal., Mamm Genome 1995 Dec;6(12):850-7.
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:520573   PMID:600262   PMID:678293   PMID:1311971   PMID:1889815   PMID:2165966   PMID:2459056   PMID:3745925   PMID:3875551   PMID:4040754   PMID:6180984   PMID:6816725  
PMID:7119440   PMID:7141490   PMID:7141491   PMID:7209520   PMID:7264342   PMID:7274663   PMID:7647795   PMID:7748558   PMID:7956838   PMID:7965042   PMID:7993390   PMID:8083744  
PMID:8102126   PMID:8449501   PMID:9363440   PMID:9384611   PMID:9425240   PMID:9738920   PMID:10349636   PMID:10861246   PMID:10871872   PMID:10922068   PMID:11042159   PMID:11076861  
PMID:11217851   PMID:12023988   PMID:12477932   PMID:14656967   PMID:14681479   PMID:14993187   PMID:15084520   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:16408748  
PMID:17248764   PMID:17883393   PMID:18497889   PMID:18553168   PMID:18606142   PMID:18689602   PMID:18695048   PMID:19217813   PMID:19430901   PMID:19506080   PMID:19714866   PMID:19857571  
PMID:19889639   PMID:20100694   PMID:20388541   PMID:20491786   PMID:21267068   PMID:21670299   PMID:21677750   PMID:21873432   PMID:21873635   PMID:21928149   PMID:22322304   PMID:22984145  
PMID:22989879   PMID:23520133   PMID:23533084   PMID:23727924   PMID:23770387   PMID:23827939   PMID:24225533   PMID:24357053   PMID:25187624   PMID:26001931   PMID:26185093   PMID:26824057  
PMID:27720939   PMID:28429532   PMID:28442549   PMID:29357434   PMID:29897583   PMID:30097518   PMID:30308156   PMID:30429216   PMID:31649671   PMID:32975669   PMID:33749450   PMID:33781239  
PMID:34156977   PMID:35002528   PMID:35354905   PMID:35363389   PMID:36127469   PMID:36973294  


Genomics

Comparative Map Data
Neu1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391735,150,229 - 35,156,273 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1735,150,229 - 35,154,929 (+)EnsemblGRCm39 Ensembl
GRCm381734,931,253 - 34,937,297 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1734,931,253 - 34,935,953 (+)EnsemblGRCm38mm10GRCm38
MGSCv371735,068,198 - 35,074,242 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361734,539,435 - 34,543,377 (+)NCBIMGSCv36mm8
Celera1738,027,486 - 38,033,530 (+)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1718.48NCBI
NEU1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38631,857,659 - 31,862,821 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl631,857,659 - 31,862,905 (-)EnsemblGRCh38hg38GRCh38
GRCh37631,825,436 - 31,830,598 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36631,934,931 - 31,938,662 (-)NCBINCBI36Build 36hg18NCBI36
Build 34631,934,931 - 31,938,662NCBI
Celera633,425,415 - 33,429,295 (-)NCBICelera
Cytogenetic Map6p21.33NCBI
HuRef631,612,642 - 31,616,522 (-)NCBIHuRef
CHM1_1631,828,970 - 31,832,850 (-)NCBICHM1_1
T2T-CHM13v2.0631,710,899 - 31,716,061 (-)NCBIT2T-CHM13v2.0
Neu1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2203,897,480 - 3,901,745 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl203,897,480 - 3,901,745 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx204,597,480 - 4,601,727 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0203,959,222 - 3,963,469 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0204,496,415 - 4,500,659 (-)NCBIRnor_WKY
Rnor_6.0204,610,995 - 4,615,258 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl204,610,995 - 4,615,247 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0206,690,982 - 6,695,245 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,999,317 - 4,003,800 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1203,999,977 - 4,003,886 (-)NCBI
Celera204,127,729 - 4,131,992 (+)NCBICelera
Cytogenetic Map20p12NCBI
Neu1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955437378,708 - 383,085 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955437378,708 - 383,076 (-)NCBIChiLan1.0ChiLan1.0
NEU1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1642,299,753 - 42,303,551 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0631,522,392 - 31,526,097 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1632,409,217 - 32,412,971 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl632,409,217 - 32,412,971 (-)Ensemblpanpan1.1panPan2
NEU1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1121,323,659 - 1,327,989 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl121,323,877 - 1,328,520 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha121,458,231 - 1,463,184 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0121,465,128 - 1,470,088 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl121,465,833 - 1,469,900 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1121,322,829 - 1,327,813 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0121,390,787 - 1,395,741 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0121,455,970 - 1,460,945 (-)NCBIUU_Cfam_GSD_1.0
Neu1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494635,874,214 - 35,878,035 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367271,683,204 - 1,688,883 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049367271,683,283 - 1,687,130 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NEU1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl723,947,061 - 23,958,666 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1723,953,721 - 23,958,659 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2727,853,642 - 27,858,581 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NEU1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11740,158,530 - 40,162,254 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1740,158,679 - 40,161,723 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604431,773,648 - 31,777,370 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Neu1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475424,382,467 - 24,387,874 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475424,382,509 - 24,386,410 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1059
Count of miRNA genes:616
Interacting mature miRNAs:731
Transcripts:ENSMUST00000007253, ENSMUST00000173269, ENSMUST00000174715
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1302189Dps3_mdelta power in slow-wave sleep 3 (mouse)Not determined173381972136250180Mouse
1301759Sles1_msystemic lupus erythmatosus suppressor 1 (mouse)Not determined173421989035175937Mouse

Markers in Region
RH125665  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,935,681 - 34,935,930UniSTSGRCm38
MGSCv371735,072,626 - 35,072,875UniSTSGRCm37
Celera1738,031,914 - 38,032,163UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.93UniSTS
Whitehead/MRC_RH17469.33UniSTS
RH125673  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,935,698 - 34,935,920UniSTSGRCm38
MGSCv371735,072,643 - 35,072,865UniSTSGRCm37
Celera1738,031,931 - 38,032,153UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.93UniSTS
Whitehead/MRC_RH17463.95UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF109906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ560662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK193377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY281600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU406966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU463845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U93702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y11412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000007253   ⟹   ENSMUSP00000007253
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,150,229 - 35,154,897 (+)Ensembl
GRCm38.p6 Ensembl1734,931,253 - 34,935,921 (+)Ensembl
RefSeq Acc Id: ENSMUST00000173269
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,150,290 - 35,154,929 (+)Ensembl
GRCm38.p6 Ensembl1734,931,314 - 34,935,953 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174715
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1735,150,839 - 35,151,741 (+)Ensembl
GRCm38.p6 Ensembl1734,931,863 - 34,932,765 (+)Ensembl
RefSeq Acc Id: NM_010893   ⟹   NP_035023
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391735,150,229 - 35,156,273 (+)NCBI
GRCm381734,931,253 - 34,937,297 (+)ENTREZGENE
MGSCv371735,068,198 - 35,074,242 (+)RGD
Celera1738,027,486 - 38,033,530 (+)RGD
cM Map17 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035023   ⟸   NM_010893
- Peptide Label: precursor
- UniProtKB: Q99KG9 (UniProtKB/Swiss-Prot),   O35657 (UniProtKB/Swiss-Prot),   Q3UL64 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000007253   ⟸   ENSMUST00000007253
Protein Domains
Sialidase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35657-F1-model_v2 AlphaFold O35657 1-409 view protein structure

Promoters
RGD ID:13675762
Promoter ID:EPDNEW_M22030
Type:multiple initiation site
Name:Neu1_1
Description:Mus musculus neuraminidase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381734,931,369 - 34,931,429EPDNEW
RGD ID:6828403
Promoter ID:MM_KWN:23245
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_010893
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361735,068,084 - 35,068,584 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97305 AgrOrtholog
Ensembl Genes ENSMUSG00000007038 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000007253 ENTREZGENE
  ENSMUSP00000007253.6 UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000007253 ENTREZGENE
  ENSMUST00000007253.6 UniProtKB/Swiss-Prot
Gene3D-CATH 2.120.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Sialidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sialidase_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sialidase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18010 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:97305 ENTREZGENE
NCBI Gene 18010 ENTREZGENE
PANTHER PTHR10628 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SIALIDASE-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam BNR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Neu1 PhenoGen
Superfamily-SCOP SSF50939 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt NEUR1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3UL64 ENTREZGENE, UniProtKB/TrEMBL
  Q99KG9 ENTREZGENE
UniProt Secondary O55220 UniProtKB/Swiss-Prot
  Q99KG9 UniProtKB/Swiss-Prot