Itpr1 (inositol 1,4,5-trisphosphate receptor 1) - Rat Genome Database

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Gene: Itpr1 (inositol 1,4,5-trisphosphate receptor 1) Mus musculus
Analyze
Symbol: Itpr1
Name: inositol 1,4,5-trisphosphate receptor 1
RGD ID: 10821
MGI Page MGI
Description: Enables several functions, including inositol 1,4,5 trisphosphate binding activity; inositol 1,4,5-trisphosphate receptor activity involved in regulation of postsynaptic cytosolic calcium levels; and protein homodimerization activity. Involved in several processes, including G protein-coupled receptor signaling pathway; positive regulation of insulin secretion; and protein homotetramerization. Acts upstream of or within several processes, including calcium ion transport; endoplasmic reticulum calcium ion homeostasis; and voluntary musculoskeletal movement. Located in endoplasmic reticulum; nucleus; and postsynaptic density. Part of calcineurin complex. Is active in Schaffer collateral - CA1 synapse. Is expressed in several structures, including brain; brown fat; genitourinary system; heart; and hemolymphoid system. Human ortholog(s) of this gene implicated in Gillespie syndrome; spinocerebellar ataxia type 15; and spinocerebellar ataxia type 29. Orthologous to human ITPR1 (inositol 1,4,5-trisphosphate receptor type 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: D6Pas2; ENSMUSG00000072853; Gm10429; I; inositol 1,4,5 trisphosphate receptor; inositol 1,4,5-triphosphate receptor 1; inositol 1,4,5-trisphosphate receptor type 1; inositol 1,4,5-trisphosphate-binding protein P400; inositol 1,4,5-trisphosphate-gated calcium channel ITPR1; InsP3R; InsP3R type I; insP3R1; InsP>3
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396108,190,044 - 108,528,077 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6108,190,057 - 108,528,070 (+)EnsemblGRCm39 Ensembl
GRCm386108,213,083 - 108,551,116 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6108,213,096 - 108,551,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv376108,163,090 - 108,501,108 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366108,178,895 - 108,516,886 (+)NCBIMGSCv36mm8
Celera6110,018,018 - 110,348,287 (+)NCBICelera
Cytogenetic Map6E1- E2NCBI
cM Map649.74NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(1->4)-beta-D-glucan  (EXP)
(E)-thiamethoxam  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
1D-myo-inositol 1,4,5-trisphosphate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-methylcholanthrene  (ISO)
3-nitropropanoic acid  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diisothiocyano-trans-stilbene-2,2'-disulfonic acid  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-amino-2,6-dinitrotoluene  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
7,9-dihydro-1H-purine-2,6,8(3H)-trione  (ISO)
acetaldehyde  (ISO)
acrolein  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
ammonium acetate  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
Anemoside B4  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP,ISO)
arsenous acid  (EXP,ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bexarotene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bleomycin A5  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (ISO)
calcitriol  (ISO)
calcium atom  (ISO)
calcium oxalate  (ISO)
calcium(0)  (ISO)
carbon nanotube  (EXP,ISO)
CGP 52608  (ISO)
clofibrate  (EXP)
cobalt dichloride  (ISO)
cocaine  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
Cuprizon  (ISO)
cycloheximide  (ISO)
cypermethrin  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (EXP,ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diuron  (ISO)
Doramectin  (ISO)
dorsomorphin  (ISO)
emodin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
etoposide  (ISO)
fenthion  (EXP)
fenvalerate  (EXP)
flavonoids  (ISO)
folic acid  (EXP)
fomepizole  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
genistein  (ISO)
glyoxylic acid  (ISO)
glyphosate  (ISO)
GW 4064  (EXP)
halothane  (EXP)
homocysteine  (ISO)
hydrogen peroxide  (ISO)
ketoconazole  (ISO)
lead diacetate  (EXP)
lead(0)  (ISO)
linsidomine  (ISO)
losartan  (ISO)
maneb  (EXP)
melatonin  (EXP)
metformin  (ISO)
methapyrilene  (ISO)
methidathion  (EXP)
methotrexate  (ISO)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
N-hexadecanoylsphingosine  (EXP)
nevirapine  (ISO)
nickel atom  (ISO)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
oxycodone  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
PCB138  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
phenethyl caffeate  (EXP)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
pirinixic acid  (EXP,ISO)
potassium chloride  (ISO)
procaine  (ISO)
progesterone  (ISO)
propanal  (ISO)
propiconazole  (EXP)
pyrazinecarboxamide  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
sarin  (ISO)
SB 431542  (ISO)
scopolamine  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP,ISO)
sodium dodecyl sulfate  (ISO)
Soman  (ISO)
succimer  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP,ISO)
tauroursodeoxycholic acid  (EXP)
testosterone  (ISO)
thapsigargin  (EXP,ISO)
thiamethoxam  (EXP)
thifluzamide  (ISO)
thioacetamide  (ISO)
toluene  (ISO)
topiramate  (ISO)
topotecan  (ISO)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
trovafloxacin  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vanillic acid  (ISO)
vinclozolin  (ISO)
vincristine  (ISO)
vorinostat  (ISO)
xestospongin C  (ISO)
XL147  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
calcium import into the mitochondrion  (ISS)
calcium ion transport  (IDA)
calcium-mediated signaling  (IEA)
cell morphogenesis  (IMP)
cellular response to cAMP  (ISO)
cellular response to hypoxia  (ISO)
dendrite development  (ISO)
endoplasmic reticulum calcium ion homeostasis  (IGI)
epithelial fluid transport  (IDA)
intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress  (IMP)
ion channel modulating, G protein-coupled receptor signaling pathway  (IGI,IMP)
ligand-gated ion channel signaling pathway  (IGI,IMP)
liver regeneration  (ISO)
negative regulation of apoptotic process  (ISO)
negative regulation of calcium-mediated signaling  (IEA)
phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway  (IGI)
phospholipase C-activating G protein-coupled receptor signaling pathway  (IMP)
positive regulation of apoptotic process  (IEA,ISO)
positive regulation of calcium ion transport  (ISO)
positive regulation of cytosolic calcium ion concentration  (ISO)
positive regulation of hepatocyte proliferation  (ISO)
positive regulation of insulin secretion  (IGI,IMP)
positive regulation of neuron projection development  (ISO)
post-embryonic development  (IMP)
protein homotetramerization  (IDA)
regulation of cytosolic calcium ion concentration  (IDA)
regulation of postsynaptic cytosolic calcium ion concentration  (IEA)
release of sequestered calcium ion into cytosol  (IBA,IMP,ISO)
release of sequestered calcium ion into cytosol by endoplasmic reticulum  (ISO,ISS)
response to hypoxia  (IDA,ISO)
single fertilization  (IDA)
voluntary musculoskeletal movement  (IMP)

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway   (ISO)
Alzheimer's disease pathway  (IEA)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway   (ISO)
calcium transport pathway   (ISO)
calcium/calcium-mediated signaling pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
glutamate signaling pathway  (IEA)
gonadotropin-releasing hormone signaling pathway   (IEA)
Huntington's disease pathway  (IEA)
ibutilide pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
long term depression  (IEA)
long term potentiation  (IEA)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
phosphatidylinositol 3-kinase signaling pathway  (IEA)
pindolol pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Two Italian families with ITPR1 gene deletion presenting a broader phenotype of SCA15. Di Gregorio E, etal., Cerebellum. 2010 Mar;9(1):115-23.
2. Defective calcium homeostasis in the cerebellum in a mouse model of Niemann-Pick A disease. Ginzburg L and Futerman AH, J Neurochem. 2005 Dec;95(6):1619-28. Epub 2005 Nov 8.
3. Intracerebroventricular administration of quinolinic acid induces a selective decrease of inositol(1,4,5)-trisphosphate receptor in rat brain. Haug LS, etal., Neurochem Int. 1998 Aug;33(2):109-19.
4. Decreased inositol (1,4,5)-trisphosphate receptor levels in Alzheimer's disease cerebral cortex: selectivity of changes and possible correlation to pathological severity. Haug LS, etal., Neurodegeneration. 1996 Jun;5(2):169-76.
5. Mechanism of ER stress-induced brain damage by IP(3) receptor. Higo T, etal., Neuron. 2010 Dec 9;68(5):865-78.
6. Functional Role of Intracellular Calcium Receptor Inositol 1,4,5-Trisphosphate Type 1 in Rat Hippocampus after Neonatal Anoxia. Ikebara JM, etal., PLoS One. 2017 Jan 10;12(1):e0169861. doi: 10.1371/journal.pone.0169861. eCollection 2017.
7. Hypoxia modulates gene expression of IP3 receptors in rodent cerebellum. Jurkovicova D, etal., Pflugers Arch. 2007 Jun;454(3):415-25. Epub 2007 Feb 7.
8. Calpain-cleaved type 1 inositol 1,4,5-trisphosphate receptor (InsP(3)R1) has InsP(3)-independent gating and disrupts intracellular Ca(2+) homeostasis. Kopil CM, etal., J Biol Chem. 2011 Oct 14;286(41):35998-6010. Epub 2011 Aug 22.
9. Peripheral gene expression profile of mechanical hyperalgesia induced by repeated cold stress in SHRSP5/Dmcr rats. Kozaki Y, etal., J Physiol Sci. 2015 Sep;65(5):417-25. doi: 10.1007/s12576-015-0380-9. Epub 2015 May 14.
10. Altered expression of type 1 inositol 1,4,5-trisphosphate receptor in the Ngsk Prnp deficient mice. Lee HP, etal., Neuroscience. 2010 May 19;167(3):799-808. Epub 2010 Feb 26.
11. The effect of substance P on asthmatic rat airway smooth muscle cell proliferation, migration, and cytoplasmic calcium concentration in vitro. Li M, etal., J Inflamm (Lond). 2011 Jul 21;8(1):18.
12. SCA15 due to large ITPR1 deletions in a cohort of 333 white families with dominant ataxia. Marelli C, etal., Arch Neurol. 2011 May;68(5):637-43.
13. Type 1 inositol 1,4,5-trisphosphate receptor knock-out mice: their phenotypes and their meaning in neuroscience and clinical practice. Matsumoto M and Nagata E, J Mol Med (Berl). 1999 May;77(5):406-11.
14. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
15. MGDs mouse GO annotations MGD data from the GO Consortium
16. MGD IEA MGD IEA
17. Vitamin D and calcium co-therapy mitigates pre-established cadmium nephropathy by regulating renal calcium homeostatic molecules and improving anti-oxidative and anti-inflammatory activities in rat. Obaid AA, etal., J Trace Elem Med Biol. 2023 May 24;79:127221. doi: 10.1016/j.jtemb.2023.127221.
18. Mapping a cardiomyopathy locus to chromosome 3p22-p25. Olson TM and Keating MT, J Clin Invest 1996 Jan 15;97(2):528-32.
19. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
20. The bHLH transcription factor Mist1 is required to maintain exocrine pancreas cell organization and acinar cell identity. Pin CL, etal., J Cell Biol 2001 Nov 12;155(4):519-30. Epub 2001 Nov 5.
21. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
22. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
23. Mouse MP Annotation Import Pipeline RGD automated import pipeline
24. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
25. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
26. Neuroprotective effects of inositol 1,4,5-trisphosphate receptor C-terminal fragment in a Huntington's disease mouse model. Tang TS, etal., J Neurosci. 2009 Feb 4;29(5):1257-66.
27. Regulation of inositol 1,4,5-trisphosphate-induced Ca2+ release by reversible phosphorylation and dephosphorylation. Vanderheyden V, etal., Biochim Biophys Acta. 2009 Jun;1793(6):959-70. doi: 10.1016/j.bbamcr.2008.12.003. Epub 2008 Dec 16.
28. Disrupted placental vitamin D metabolism and calcium signaling in gestational diabetes and pre-eclampsia patients. Varshney S, etal., Endocrine. 2023 Apr;80(1):191-200. doi: 10.1007/s12020-022-03272-9. Epub 2022 Dec 8.
29. Inositol 1,4,5-trisphosphate receptor 1 mutation perturbs glucose homeostasis and enhances susceptibility to diet-induced diabetes. Ye R, etal., J Endocrinol. 2011 Aug;210(2):209-17. Epub 2011 May 12.
30. In situ hybridization of mRNA expression for IP3 receptor and IP3-3-kinase in rat brain after transient focal cerebral ischemia. Zhang SX, etal., Brain Res Mol Brain Res. 1995 Sep;32(2):252-60.
Additional References at PubMed
PMID:1374893   PMID:1648733   PMID:1662017   PMID:1672287   PMID:2554142   PMID:2707487   PMID:2762133   PMID:3141586   PMID:3199205   PMID:7642703   PMID:7755592   PMID:7852357  
PMID:7896292   PMID:7945203   PMID:7946968   PMID:8081710   PMID:8530061   PMID:8538767   PMID:8641130   PMID:8661054   PMID:8663526   PMID:8758947   PMID:8780003   PMID:8863127  
PMID:8900188   PMID:8930970   PMID:8987786   PMID:9124414   PMID:9231705   PMID:9302515   PMID:9615221   PMID:9651219   PMID:9697703   PMID:9808793   PMID:9858485   PMID:9867846  
PMID:9867847   PMID:9986730   PMID:10051594   PMID:10095099   PMID:10098882   PMID:10349636   PMID:10482245   PMID:10505685   PMID:10512203   PMID:10570150   PMID:10609087   PMID:10620513  
PMID:10811729   PMID:10922068   PMID:11040263   PMID:11042159   PMID:11076861   PMID:11117745   PMID:11172053   PMID:11217851   PMID:11226314   PMID:11334652   PMID:11368972   PMID:11476286  
PMID:11544199   PMID:11700294   PMID:11860456   PMID:11955285   PMID:11980893   PMID:12110570   PMID:12118121   PMID:12421829   PMID:12442173   PMID:12444087   PMID:12466851   PMID:12477932  
PMID:12520002   PMID:12525476   PMID:12611586   PMID:12617961   PMID:12621039   PMID:12654335   PMID:12828938   PMID:12904583   PMID:12967979   PMID:12972155   PMID:14506248   PMID:14610273  
PMID:14687547   PMID:14691545   PMID:14706453   PMID:14722080   PMID:14741211   PMID:15016804   PMID:15026142   PMID:15184066   PMID:15201137   PMID:15284241   PMID:15364918   PMID:15483626  
PMID:15489334   PMID:15579147   PMID:15583010   PMID:15590059   PMID:15613488   PMID:15652484   PMID:15664189   PMID:15840001   PMID:15890645   PMID:15947791   PMID:16014380   PMID:16091359  
PMID:16103111   PMID:16141072   PMID:16141073   PMID:16286649   PMID:16292983   PMID:16458354   PMID:16512683   PMID:16527252   PMID:16602821   PMID:16606357   PMID:16675011   PMID:16691292  
PMID:16731645   PMID:16783635   PMID:16793548   PMID:16844763   PMID:16925983   PMID:16959763   PMID:16964447   PMID:16973214   PMID:17015433   PMID:17038520   PMID:17050730   PMID:17208939  
PMID:17327232   PMID:17416589   PMID:17482902   PMID:17500595   PMID:17511035   PMID:17581770   PMID:17590087   PMID:17594801   PMID:17635105   PMID:17868032   PMID:17890015   PMID:17915250  
PMID:18055048   PMID:18194433   PMID:18241669   PMID:18287559   PMID:18480159   PMID:18480293   PMID:18483150   PMID:18505727   PMID:18547250   PMID:18621368   PMID:18799693   PMID:18838384  
PMID:18946029   PMID:18990696   PMID:19068129   PMID:19081133   PMID:19120126   PMID:19120137   PMID:19167437   PMID:19706527   PMID:19752026   PMID:19798695   PMID:19799774   PMID:20223265  
PMID:20234002   PMID:20375013   PMID:20375063   PMID:20519450   PMID:20564261   PMID:20713546   PMID:20801505   PMID:20813840   PMID:20824138   PMID:20843799   PMID:21071436   PMID:21267068  
PMID:21382375   PMID:21424589   PMID:21457704   PMID:21465476   PMID:21568942   PMID:21610068   PMID:21689634   PMID:21818117   PMID:21862448   PMID:21873635   PMID:21876165   PMID:22031873  
PMID:22033896   PMID:22056561   PMID:22418950   PMID:22427743   PMID:22495310   PMID:22586220   PMID:22633850   PMID:22794259   PMID:22819818   PMID:22929228   PMID:22973002   PMID:22992961  
PMID:23000618   PMID:23058917   PMID:23223241   PMID:23321785   PMID:23413940   PMID:23463619   PMID:23479737   PMID:23542070   PMID:23597509   PMID:23851254   PMID:23884412   PMID:23884927  
PMID:24097979   PMID:24109434   PMID:24374158   PMID:24491816   PMID:24692207   PMID:24743743   PMID:24828645   PMID:24952961   PMID:25215520   PMID:25242522   PMID:25262337   PMID:25270259  
PMID:25332179   PMID:25368151   PMID:25637353   PMID:25734498   PMID:25737585   PMID:25821909   PMID:25897502   PMID:25917818   PMID:26072023   PMID:26075576   PMID:26124274   PMID:26168218  
PMID:26259730   PMID:26453192   PMID:26611753   PMID:26711343   PMID:26822703   PMID:27053113   PMID:27062503   PMID:27108798   PMID:27402766   PMID:27514653   PMID:27777977   PMID:28211945  
PMID:28413018   PMID:28416699   PMID:28419336   PMID:28495882   PMID:28578927   PMID:28598420   PMID:28607044   PMID:28615414   PMID:28966992   PMID:29111324   PMID:29382714   PMID:29388468  
PMID:30122316   PMID:30135210   PMID:30196744   PMID:30251688   PMID:30382364   PMID:30550785   PMID:30562941   PMID:30659110   PMID:30786075   PMID:30995482   PMID:31040226   PMID:31073041  
PMID:31256144   PMID:31391379   PMID:31491533   PMID:31664108   PMID:32123907   PMID:32161359   PMID:32320395   PMID:32325033   PMID:32554809   PMID:32675284   PMID:32770009   PMID:32957029  
PMID:33323119   PMID:34321999   PMID:34338282   PMID:34512174   PMID:34580197   PMID:34630045   PMID:34815492   PMID:35166236   PMID:35494252   PMID:35568199   PMID:35621185   PMID:36265442  
PMID:36417873   PMID:36656174   PMID:36894534   PMID:37164302   PMID:37851027   PMID:38099643   PMID:38159072   PMID:38355793  


Genomics

Comparative Map Data
Itpr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396108,190,044 - 108,528,077 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6108,190,057 - 108,528,070 (+)EnsemblGRCm39 Ensembl
GRCm386108,213,083 - 108,551,116 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6108,213,096 - 108,551,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv376108,163,090 - 108,501,108 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366108,178,895 - 108,516,886 (+)NCBIMGSCv36mm8
Celera6110,018,018 - 110,348,287 (+)NCBICelera
Cytogenetic Map6E1- E2NCBI
cM Map649.74NCBI
ITPR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3834,493,348 - 4,847,506 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl34,493,345 - 4,847,506 (+)EnsemblGRCh38hg38GRCh38
GRCh3734,535,032 - 4,889,190 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3634,510,034 - 4,864,286 (+)NCBINCBI36Build 36hg18NCBI36
Build 3434,510,135 - 4,864,079NCBI
Celera34,473,120 - 4,827,522 (+)NCBICelera
Cytogenetic Map3p26.1NCBI
HuRef34,468,779 - 4,822,934 (+)NCBIHuRef
CHM1_134,485,103 - 4,839,760 (+)NCBICHM1_1
T2T-CHM13v2.034,487,354 - 4,841,309 (+)NCBIT2T-CHM13v2.0
Itpr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84142,743,401 - 143,066,505 (+)NCBIGRCr8
mRatBN7.24141,187,377 - 141,554,240 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4141,187,418 - 141,510,491 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4146,609,417 - 146,932,882 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04142,390,143 - 142,713,600 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04141,034,101 - 141,357,581 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04140,247,297 - 140,580,749 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4140,247,313 - 140,580,748 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04204,714,729 - 205,047,901 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44143,705,360 - 144,030,051NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4129,839,611 - 130,162,657 (+)NCBICelera
RH 3.4 Map4 RGD
Cytogenetic Map4q41NCBI
ITPR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v224,506,900 - 4,861,017 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan134,511,663 - 4,865,777 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v034,448,574 - 4,802,545 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.134,549,775 - 4,904,811 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl34,572,921 - 4,904,811 (+)Ensemblpanpan1.1panPan2
ITPR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12012,746,171 - 13,065,256 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2012,747,315 - 13,064,198 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2012,719,920 - 13,038,750 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02012,789,247 - 13,108,309 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2012,789,627 - 13,108,328 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12012,494,231 - 12,813,462 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02012,835,196 - 13,153,754 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02012,821,769 - 13,140,816 (-)NCBIUU_Cfam_GSD_1.0
Itpr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494210,941,137 - 11,243,016 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365773,896,390 - 4,198,411 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365773,896,455 - 4,198,396 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ITPR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1361,068,126 - 61,398,912 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11361,068,131 - 61,398,918 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21367,499,295 - 67,702,956 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ITPR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12240,574,569 - 40,925,857 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2240,574,374 - 40,926,842 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041125,743,247 - 126,095,217 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Itpr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477314,856,804 - 15,193,168 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477314,856,803 - 15,193,173 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Itpr1
19509 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1033
Count of miRNA genes:496
Interacting mature miRNAs:633
Transcripts:ENSMUST00000032192
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
12792979Fbmd2_mfemoral bone mineral density 2, females only (mouse)675026989115026943Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104480321127019938Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined688982366122982564Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699132089133132228Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684099474118099474Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687480321121480516Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675584287109584431Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686783787113521563Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652138693116132228Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675693484109693678Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690772571124772807Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698694477132694676Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696324286130324483Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92584287111981699Mouse
1357793Pnhdlc1_mplasma non-HDL cholesterol 1 (mouse)Not determined6105541783114345810Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104480321136400690Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined105982366120894102Mouse
12910776Hcga4b_mhome cage activity 4b (mouse)6104480321110937026Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678606487121092347Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined694981612128981699Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696324286130324483Mouse

Markers in Region
23.MMHAP7FLH2.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,464,172 - 108,464,334UniSTSGRCm38
MGSCv376108,414,166 - 108,414,328UniSTSGRCm37
Celera6110,262,372 - 110,262,534UniSTS
Cytogenetic Map6E1-E2UniSTS
Whitehead_YAC6 UniSTS
33.MMHAP69FLC6.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,305,134 - 108,305,301UniSTSGRCm38
MGSCv376108,255,128 - 108,255,295UniSTSGRCm37
Celera6110,102,698 - 110,102,865UniSTS
Cytogenetic Map6E1-E2UniSTS
Whitehead_YAC6 UniSTS
Itpr1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386108,550,828 - 108,550,953UniSTSGRCm38
MGSCv376108,500,822 - 108,500,947UniSTSGRCm37
Celera6110,348,001 - 110,348,126UniSTS
Cytogenetic Map6E1-E2UniSTS
cM Map648.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC120411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC153986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH001976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY857958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ180028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU705754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX633137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY145967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB521690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF168791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF539692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF744794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ236273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK636937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN459019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN692248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D78171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DN176734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV652411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M21530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S75867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X15373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000032192   ⟹   ENSMUSP00000032192
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,190,057 - 108,528,070 (+)Ensembl
GRCm38.p6 Ensembl6108,213,096 - 108,551,109 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203262   ⟹   ENSMUSP00000145177
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,393,765 - 108,417,648 (+)Ensembl
GRCm38.p6 Ensembl6108,416,804 - 108,440,687 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203288
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,485,274 - 108,489,891 (+)Ensembl
GRCm38.p6 Ensembl6108,508,313 - 108,512,930 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203530
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,470,763 - 108,476,595 (+)Ensembl
GRCm38.p6 Ensembl6108,493,802 - 108,499,634 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203615   ⟹   ENSMUSP00000144880
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,190,163 - 108,528,070 (+)Ensembl
GRCm38.p6 Ensembl6108,213,202 - 108,551,109 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203638   ⟹   ENSMUSP00000145522
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,393,832 - 108,450,601 (+)Ensembl
GRCm38.p6 Ensembl6108,416,871 - 108,473,640 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203687   ⟹   ENSMUSP00000145339
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,394,838 - 108,417,603 (+)Ensembl
GRCm38.p6 Ensembl6108,417,877 - 108,440,642 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203936   ⟹   ENSMUSP00000145526
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,333,215 - 108,354,764 (+)Ensembl
GRCm38.p6 Ensembl6108,356,254 - 108,377,803 (+)Ensembl
Ensembl Acc Id: ENSMUST00000203995
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,229,919 - 108,369,961 (+)Ensembl
GRCm38.p6 Ensembl6108,252,958 - 108,393,000 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205005
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,495,693 - 108,496,633 (+)Ensembl
GRCm38.p6 Ensembl6108,518,732 - 108,519,672 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205048
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,435,664 - 108,448,090 (+)Ensembl
GRCm38.p6 Ensembl6108,458,703 - 108,471,129 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205053
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,392,231 - 108,395,962 (+)Ensembl
GRCm38.p6 Ensembl6108,415,270 - 108,419,001 (+)Ensembl
Ensembl Acc Id: ENSMUST00000212125   ⟹   ENSMUSP00000148284
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6108,364,395 - 108,378,429 (+)Ensembl
GRCm38.p6 Ensembl6108,387,434 - 108,401,468 (+)Ensembl
RefSeq Acc Id: NM_010585   ⟹   NP_034715
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,057 - 108,528,077 (+)NCBI
GRCm386108,213,096 - 108,551,116 (+)NCBI
MGSCv376108,163,090 - 108,501,108 (+)RGD
Celera6110,018,018 - 110,348,289 (+)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006505623   ⟹   XP_006505686
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505624   ⟹   XP_006505687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505625   ⟹   XP_006505688
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505626   ⟹   XP_006505689
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505627   ⟹   XP_006505690
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505628   ⟹   XP_006505691
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505629   ⟹   XP_006505692
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505630   ⟹   XP_006505693
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505631   ⟹   XP_006505694
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,526,803 (+)NCBI
GRCm386108,213,083 - 108,549,842 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505632   ⟹   XP_006505695
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505633   ⟹   XP_006505696
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505636   ⟹   XP_006505699
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505637   ⟹   XP_006505700
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321407   ⟹   XP_017176896
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321408   ⟹   XP_017176897
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321409   ⟹   XP_017176898
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321410   ⟹   XP_017176899
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,528,075 (+)NCBI
GRCm386108,213,083 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030255199   ⟹   XP_030111059
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,314,379 - 108,528,075 (+)NCBI
GRCm386108,337,418 - 108,551,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165883   ⟹   XP_036021776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,190,044 - 108,393,534 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_034715 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505686 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505687 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505688 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505689 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505690 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505691 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505692 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505693 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505694 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505695 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505696 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505699 (Get FASTA)   NCBI Sequence Viewer  
  XP_006505700 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176896 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176897 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176898 (Get FASTA)   NCBI Sequence Viewer  
  XP_017176899 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111059 (Get FASTA)   NCBI Sequence Viewer  
  XP_036021776 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA39316 (Get FASTA)   NCBI Sequence Viewer  
  AAA39317 (Get FASTA)   NCBI Sequence Viewer  
  AAA88319 (Get FASTA)   NCBI Sequence Viewer  
  AAH03271 (Get FASTA)   NCBI Sequence Viewer  
  AAH68269 (Get FASTA)   NCBI Sequence Viewer  
  BAC32085 (Get FASTA)   NCBI Sequence Viewer  
  BAC33138 (Get FASTA)   NCBI Sequence Viewer  
  BAC33514 (Get FASTA)   NCBI Sequence Viewer  
  BAE23370 (Get FASTA)   NCBI Sequence Viewer  
  CAA33433 (Get FASTA)   NCBI Sequence Viewer  
  EDK99408 (Get FASTA)   NCBI Sequence Viewer  
  EDK99409 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000032192
  ENSMUSP00000032192.7
  ENSMUSP00000144880
  ENSMUSP00000144880.2
  ENSMUSP00000145177.2
  ENSMUSP00000145339.2
  ENSMUSP00000145522.2
  ENSMUSP00000145526.2
  ENSMUSP00000148284.2
GenBank Protein P11881 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034715   ⟸   NM_010585
- UniProtKB: P20943 (UniProtKB/Swiss-Prot),   Q99LG5 (UniProtKB/Swiss-Prot),   P11881 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006505686   ⟸   XM_006505623
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505690   ⟸   XM_006505627
- Peptide Label: isoform X6
- Sequence: