Cnr1 (cannabinoid receptor 1) - Rat Genome Database

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Gene: Cnr1 (cannabinoid receptor 1) Mus musculus
Analyze
Symbol: Cnr1
Name: cannabinoid receptor 1
RGD ID: 10370
MGI Page MGI
Description: Enables cannabinoid receptor activity. Involved in regulation of presynaptic cytosolic calcium ion concentration and retrograde trans-synaptic signaling by endocannabinoid. Acts upstream of or within axonal fasciculation and glucose homeostasis. Located in growth cone. Is active in several cellular components, including GABA-ergic synapse; glutamatergic synapse; and presynaptic membrane. Is expressed in several structures, including alimentary system; genitourinary system; integumental system; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in obesity; schizophrenia; and type 2 diabetes mellitus. Orthologous to human CNR1 (cannabinoid receptor 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: brain-type cannabinoid receptor; cannabinoid receptor 1 (brain); CB-R; CB1; CB1A; CB1B; CB1R; striatal cannabinoid receptor type 1 protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39433,923,171 - 33,948,831 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl433,924,593 - 33,948,831 (+)EnsemblGRCm39 Ensembl
GRCm38433,923,171 - 33,948,831 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl433,924,593 - 33,948,831 (+)EnsemblGRCm38mm10GRCm38
MGSCv37434,011,607 - 34,035,806 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36434,253,245 - 34,277,444 (+)NCBIMGSCv36mm8
Celera433,679,304 - 33,703,476 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map416.28NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
alcohol use disorder  (ISO)
Alcohol Withdrawal Delirium  (ISO)
Animal Disease Models  (ISO)
anxiety disorder  (ISO)
Ascites  (ISO)
attention deficit hyperactivity disorder  (ISO)
Binge-Eating Disorder  (ISO)
cannabis abuse  (ISO)
Catalepsy  (ISO)
cholestasis  (ISO)
Cocaine-Related Disorders  (ISO)
cognitive disorder  (ISO)
developmental coordination disorder  (ISO)
diabetic neuropathy  (ISO)
Endometrial Neoplasms  (ISO)
endometriosis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
Fever  (ISO)
focal epilepsy  (ISO)
glucose intolerance  (ISO)
Hemorrhagic Shock  (ISO)
Huntington's disease  (ISO)
Hyperalgesia  (ISO)
hypertension  (ISO)
Hypotension  (ISO)
Hypothermia  (ISO)
impotence  (ISO)
Insulin Resistance  (ISO)
Intravenous Substance Abuse  (ISO)
liver cirrhosis  (ISO)
Memory Disorders  (ISO)
morphine dependence  (IEP)
movement disease  (ISO)
multiple sclerosis  (ISO)
Muscle Spasticity  (ISO)
Myocardial Reperfusion Injury  (ISO)
Nerve Degeneration  (ISO)
obesity  (IMP,ISO)
Pain  (ISO)
pancreatic cancer  (ISO)
pancreatitis  (ISO)
Parkinsonism  (ISO)
peptic ulcer disease  (ISO)
post-traumatic stress disorder  (ISO)
Reperfusion Injury  (ISO)
rhabdomyosarcoma  (ISO)
schizophrenia  (ISO)
Spinal Cord Injuries  (ISO)
status epilepticus  (ISO)
stress-related disorder  (ISO)
substance-related disorder  (ISO)
systemic scleroderma  (ISO)
temporal lobe epilepsy  (ISO)
type 2 diabetes mellitus  (ISO)
Weight Gain  (ISO)
Weight Loss  (ISO)
withdrawal disorder  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(R)-noradrenaline  (ISO)
(S)-amphetamine  (EXP)
(S)-nicotine  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrobenzenesulfonic acid  (EXP)
2-arachidonoylglycerol  (EXP,ISO)
3',5'-cyclic AMP  (ISO)
3,4-methylenedioxymethamphetamine  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-nitropropanoic acid  (ISO)
4-Hydroxy-N-desmethyltamoxifen  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
AB-Fubinaca  (EXP,ISO)
acetaldehyde  (ISO)
acrylamide  (ISO)
actinomycin D  (ISO)
Adb-fubinaca  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-amanitin  (EXP)
alpha-Zearalanol  (ISO)
AM-251  (EXP,ISO)
ammonium chloride  (ISO)
amphetamines  (ISO)
anandamide  (EXP,ISO)
arachidonyl-2'-chloroethylamide  (EXP,ISO)
aripiprazole  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (EXP)
benzo[a]pyrene  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
bleomycin A2  (ISO)
Bromazepam  (EXP)
buspirone  (EXP)
buta-1,3-diene  (EXP)
cadmium dichloride  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
cannabidiol  (EXP,ISO)
Cannabinol  (ISO)
capsaicin  (EXP,ISO)
carbazoles  (ISO)
CGP 52608  (ISO)
chaetocin  (ISO)
chloroprene  (EXP)
chlorpyrifos  (EXP)
chlorpyrifos-methyl  (EXP)
choline  (EXP)
cisplatin  (EXP,ISO)
citalopram  (ISO)
cocaine  (EXP,ISO)
colforsin daropate hydrochloride  (ISO)
corticosterone  (EXP)
crocidolite asbestos  (EXP)
Cuprizon  (EXP,ISO)
cycloheximide  (EXP,ISO)
Cyclopamine  (EXP)
cytarabine  (ISO)
D-glucose  (ISO)
decabromodiphenyl ether  (ISO)
Delta(9)-tetrahydrocannabinolic acid  (ISO)
dexamethasone  (ISO)
dextran sulfate  (EXP)
diazepam  (EXP)
diazoxon  (EXP)
dibenzofuran  (ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
dichlorvos  (EXP)
dioxygen  (ISO)
diprotium oxide  (ISO)
dizocilpine maleate  (EXP)
dorsomorphin  (ISO)
doxorubicin  (EXP)
entinostat  (ISO)
ethanol  (EXP,ISO)
fluoxetine  (ISO)
folic acid  (EXP)
fructose  (ISO)
furan  (ISO)
gemcitabine  (ISO)
gentamycin  (ISO)
ghrelin  (ISO)
glucose  (ISO)
guanosine 5'-[gamma-thio]triphosphate  (ISO)
haloperidol  (EXP,ISO)
hydrogen peroxide  (ISO)
ibuprofen  (ISO)
imipramine  (ISO)
indazoles  (ISO)
indoles  (ISO)
indometacin  (ISO)
kainic acid  (ISO)
ketamine  (ISO)
L-ascorbic acid  (ISO)
L-glutamic acid  (EXP)
L-methionine  (EXP)
linoleic acid  (EXP)
lipopolysaccharide  (EXP,ISO)
mechlorethamine  (EXP)
medroxyprogesterone acetate  (ISO)
methamphetamine  (ISO)
Methanandamide  (ISO)
methotrexate  (EXP)
methoxychlor  (ISO)
Methylazoxymethanol acetate  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
methylphenidate  (EXP)
morphine  (EXP,ISO)
N-acetyl-1,4-benzoquinone imine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-oleoyldopamine  (ISO)
nicotine  (EXP)
nimesulide  (ISO)
nitric oxide  (EXP,ISO)
nitroglycerin  (ISO)
Nonylphenol  (ISO)
ochratoxin A  (ISO)
oxidopamine  (EXP)
ozone  (ISO)
p-menthan-3-ol  (ISO)
palmitoyl ethanolamide  (ISO)
paracetamol  (ISO)
paraoxon  (EXP)
paraquat  (ISO)
parecoxib  (EXP)
pentetrazol  (EXP)
pentobarbital  (EXP)
perfluorooctanoic acid  (ISO)
phencyclidine  (EXP)
Phenol, 5-(1,1-dimethylheptyl)-2-[(1r,3s)-3-hydroxycyclohexyl]-  (EXP)
phenylmercury acetate  (ISO)
piperidines  (EXP)
poly(I:C)  (ISO)
potassium atom  (ISO)
potassium chloride  (ISO)
pregabalin  (EXP)
pregnenolone  (EXP)
progesterone  (ISO)
pyrazoles  (EXP)
pyrrolidine dithiocarbamate  (ISO)
quetiapine fumarate  (EXP)
reserpine  (ISO)
ricinoleic acid  (ISO)
rimonabant  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 203580  (EXP)
SB 431542  (ISO)
serotonin  (EXP)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
sodium arsenite  (ISO)
SR 144528  (EXP)
streptozocin  (EXP,ISO)
sulfur dioxide  (EXP)
tamoxifen  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP)
Theaflavin 3,3'-digallate  (ISO)
thioacetamide  (EXP)
titanium dioxide  (EXP)
topiramate  (EXP)
tribufos  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
valproic acid  (ISO)
venlafaxine hydrochloride  (ISO)
water  (ISO)
WIN 55212-2  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adenylate cyclase-activating G protein-coupled receptor signaling pathway  (IBA)
adenylate cyclase-modulating G protein-coupled receptor signaling pathway  (ISO,ISS)
axonal fasciculation  (IMP)
cannabinoid signaling pathway  (IEA,ISO)
G protein-coupled receptor signaling pathway  (ISO)
glucose homeostasis  (IPI)
learning or memory  (ISO)
maternal process involved in female pregnancy  (IEA,ISO)
memory  (IEA,ISO)
negative regulation of action potential  (IEA,ISO)
negative regulation of blood pressure  (IEA,ISO)
negative regulation of dopamine secretion  (IEA,ISO)
negative regulation of fatty acid beta-oxidation  (IEA,ISO)
negative regulation of mast cell activation  (IEA,ISO)
negative regulation of monoatomic ion transport  (ISO)
negative regulation of nitric-oxide synthase activity  (ISO)
negative regulation of serotonin secretion  (IEA,ISO)
positive regulation of acute inflammatory response to antigenic stimulus  (IEA,ISO)
positive regulation of apoptotic process  (IEA,ISO)
positive regulation of blood pressure  (IEA,ISO)
positive regulation of fever generation  (IEA,ISO)
positive regulation of neuron projection development  (IEA,ISO)
regulation of feeding behavior  (IEA,ISO)
regulation of insulin secretion  (IEA,ISO)
regulation of lipid metabolic process  (ISO)
regulation of metabolic process  (IBA)
regulation of penile erection  (IEA,ISO)
regulation of presynaptic cytosolic calcium ion concentration  (IDA,IMP)
regulation of synaptic transmission, GABAergic  (IEA,ISO)
regulation of synaptic transmission, glutamatergic  (IEA,ISO)
response to cocaine  (IEA,ISO)
response to ethanol  (IEA,ISO)
response to lipopolysaccharide  (IEA,ISO)
response to nicotine  (IEA,ISO)
response to nutrient  (IEA,ISO)
retrograde trans-synaptic signaling by endocannabinoid  (IDA,IMP)
spermatogenesis  (IEA,ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal active avoidance behavior  (IAGP)
abnormal axon fasciculation  (IAGP)
abnormal behavior  (IEA)
abnormal bone mineral density  (IAGP)
abnormal cerebral cortex morphology  (IAGP)
abnormal cued conditioning behavior  (IAGP)
abnormal depression-related behavior  (IAGP)
abnormal excitatory postsynaptic potential  (IAGP)
abnormal food intake  (IAGP)
abnormal gastrointestinal motility  (IAGP)
abnormal impulsive behavior control  (IAGP)
abnormal inhibitory postsynaptic currents  (IAGP)
abnormal learning/memory/conditioning  (IAGP)
abnormal nervous system development  (IAGP)
abnormal nervous system morphology  (IAGP)
abnormal nervous system physiology  (IAGP)
abnormal neuron physiology  (IAGP)
abnormal neuronal precursor proliferation  (IAGP)
abnormal paired-pulse facilitation  (IAGP)
abnormal postnatal growth  (IAGP)
abnormal response to novel object  (IAGP)
abnormal skin morphology  (IEA)
abnormal social/conspecific interaction behavior  (IAGP)
abnormal striatum morphology  (IAGP)
abnormal sweet taste sensitivity  (IAGP)
abnormal synaptic plasticity  (IAGP)
absent long-term depression  (IAGP)
anhedonia  (IAGP)
catalepsy  (IAGP)
decreased body weight  (IAGP)
decreased circulating insulin level  (IAGP)
decreased circulating leptin level  (IAGP)
decreased circulating progesterone level  (IAGP)
decreased exploration in new environment  (IAGP)
decreased locomotor activity  (IAGP)
decreased percent body fat/body weight  (IAGP)
decreased survivor rate  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased synaptic depression  (IAGP)
decreased thigmotaxis  (IEA)
decreased total body fat amount  (IAGP)
decreased vertical activity  (IAGP)
early parturition  (IAGP)
edema  (IEA)
enhanced long-term potentiation  (IAGP)
extended life span  (IAGP)
hyperactivity  (IAGP)
hypoalgesia  (IAGP)
impaired behavioral response to addictive substance  (IAGP)
impaired behavioral response to morphine  (IAGP)
impaired behavioral response to xenobiotic  (IAGP)
impaired conditioned place preference behavior  (IAGP)
impaired coordination  (IAGP)
impaired cued conditioning behavior  (IAGP)
increased aggression towards mice  (IAGP)
increased anxiety-related response  (IAGP)
increased behavioral withdrawal response  (IAGP)
increased bone mineral density  (IAGP)
increased cerebral infarct size  (IAGP)
increased chemical nociceptive threshold  (IAGP)
increased chemically-elicited antinociception  (IAGP)
increased circulating adrenocorticotropin level  (IAGP)
increased circulating corticosterone level  (IAGP)
increased circulating estradiol level  (IAGP)
increased exploration in new environment  (IAGP)
increased follicle stimulating hormone level  (IAGP)
increased insulin sensitivity  (IAGP)
increased locomotor activity  (IAGP)
increased physiological sensitivity to xenobiotic  (IAGP)
increased response to leptin  (IAGP)
increased sperm motility  (IAGP)
increased susceptibility to induced morbidity/mortality  (IAGP)
increased susceptibility to ischemic brain injury  (IAGP)
increased susceptibility to neuronal excitotoxicity  (IAGP)
increased susceptibility to pharmacologically induced seizures  (IAGP)
increased susceptibility to xenobiotic induced morbidity/mortality  (IAGP)
increased thermal nociceptive threshold  (IAGP)
maternal effect  (IAGP)
no abnormal phenotype detected  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
preweaning lethality, complete penetrance  (IEA)
preweaning lethality, incomplete penetrance  (IEA)
reduced long-term depression  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Effect of cannabinoid receptor agonists on streptozotocin-induced hyperalgesia in diabetic neuropathy. Bujalska M Pharmacology. 2008;82(3):193-200. Epub 2008 Sep 23.
2. Cannabinoid receptor gene (CNR1): association with i.v. drug use. Comings DE, etal., Mol Psychiatry 1997 Mar;2(2):161-8.
3. Food intake-independent effects of CB1 antagonism on glucose and lipid metabolism. Cota D, etal., Obesity (Silver Spring). 2009 Aug;17(8):1641-5. Epub 2009 Mar 26.
4. Cortical expression of brain derived neurotrophic factor and type-1 cannabinoid receptor after striatal excitotoxic lesions. De March Z, etal., Neuroscience. 2008 Mar 27;152(3):734-40. doi: 10.1016/j.neuroscience.2007.11.044. Epub 2007 Dec 8.
5. Type 1 diabetes alters brain cannabinoid receptor expression and phosphorylation status in rats. Diaz-Asensio C, etal., Horm Metab Res. 2008 Jul;40(7):454-8. Epub 2008 Mar 27.
6. Cannabinoid type 1 receptor antagonism delays ascites formation in rats with cirrhosis. Domenicali M, etal., Gastroenterology. 2009 Jul;137(1):341-9. Epub 2009 Jan 14.
7. Temporal characterization of changes in hippocampal cannabinoid CB(1) receptor expression following pilocarpine-induced status epilepticus. Falenski KW, etal., Brain Res. 2009 Mar 25;1262:64-72. Epub 2009 Jan 31.
8. Endogenous cannabinoids induce fever through the activation of CB1 receptors. Fraga D, etal., Br J Pharmacol. 2009 Aug;157(8):1494-501.
9. The endocannabinoid system is modulated in response to spinal cord injury in rats. Garcia-Ovejero D, etal., Neurobiol Dis. 2009 Jan;33(1):57-71. Epub 2008 Sep 30.
10. Anandamide improves the impaired nitric oxide-mediated neurogenic relaxation of the corpus cavernosum in diabetic rats: involvement of cannabinoid CB1 and vanilloid VR1 receptors. Ghasemi M, etal., BJU Int. 2007 Dec;100(6):1385-90. Epub 2007 Sep 10.
11. Acute hypertension reveals depressor and vasodilator effects of cannabinoids in conscious rats. Ho WS and Gardiner SM, Br J Pharmacol. 2009 Jan;156(1):94-104.
12. CB1 cannabinoid receptor participates in the vascular hyporeactivity resulting from hemorrhagic shock in rats. Hou LC, etal., Chin Med J (Engl). 2009 Apr 20;122(8):950-4.
13. The CB(1) antagonist rimonabant is adjunctively therapeutic as well as monotherapeutic in an animal model of Parkinson's disease. Kelsey JE, etal., Behav Brain Res. 2009 Nov 5;203(2):304-7. Epub 2009 May 3.
14. Gene discovery by microarray: identification of novel genes induced during growth factor-mediated muscle cell survival and differentiation. Kuninger D, etal., Genomics 2004 Nov;84(5):876-89.
15. Izvestiia Akademii nauk. Seriia biologicheskaia / Rossiiskaia akademiia nauk Lasukova OV, etal., Izv Akad Nauk Ser Biol. 2008 Jul-Aug;(4):471-8.
16. Unresponsiveness to cannabinoids and reduced addictive effects of opiates in CB1 receptor knockout mice. Ledent C, etal., Science 1999 Jan 15;283(5400):401-4.
17. Schizophrenia and the cannabinoid receptor type 1 (CB1): association study using a single-base polymorphism in coding exon 1. Leroy S, etal., Am J Med Genet 2001 Dec 8;105(8):749-52.
18. Sex-dependent influence of chronic mild stress (CMS) on voluntary alcohol consumption; study of neurobiological consequences. Marco EM, etal., Pharmacol Biochem Behav. 2017 Jan;152:68-80. doi: 10.1016/j.pbb.2016.11.005. Epub 2016 Nov 25.
19. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
20. MGDs mouse GO annotations MGD data from the GO Consortium
21. MGD IEA MGD IEA
22. No evidence for an involvement of variants in the cannabinoid receptor gene (CNR1) in obesity in German children and adolescents. Muller TD, etal., Mol Genet Metab. 2007 Apr;90(4):429-34. Epub 2007 Feb 8.
23. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
24. Spinal endocannabinoids and CB1 receptors mediate C-fiber-induced heterosynaptic pain sensitization. Pernia-Andrade AJ, etal., Science. 2009 Aug 7;325(5941):760-4.
25. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
26. Preclinical and Clinical Evidence for a Distinct Regulation of Mu Opioid and Type 1 Cannabinoid Receptor Genes Expression in Obesity. Pucci M, etal., Front Genet. 2019 Jun 14;10:523. doi: 10.3389/fgene.2019.00523. eCollection 2019.
27. Mouse MP Annotation Import Pipeline RGD automated import pipeline
28. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
29. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
30. Evidences of cannabinoids-induced modulation of paroxysmal events in an experimental model of partial epilepsy in the rat. Rizzo V, etal., Neurosci Lett. 2009 Sep 22;462(2):135-9. Epub 2009 Jul 10.
31. SERENADE: the Study Evaluating Rimonabant Efficacy in Drug-naive Diabetic Patients: effects of monotherapy with rimonabant, the first selective CB1 receptor antagonist, on glycemic control, body weight, and lipid profile in drug-naive type 2 diabetes. Rosenstock J, etal., Diabetes Care. 2008 Nov;31(11):2169-76. Epub 2008 Aug 4.
32. Genetic variations at the endocannabinoid type 1 receptor gene (CNR1) are associated with obesity phenotypes in men. Russo P, etal., J Clin Endocrinol Metab. 2007 Jun;92(6):2382-6. Epub 2007 Apr 3.
33. Involvement of nitric oxide in the gastroprotective effect of ACEA, a selective cannabinoid CB1 receptor agonist, on aspirin-induced gastric ulceration. Rutkowska M and Fereniec-Golebiewska L, Pharmazie. 2009 Sep;64(9):595-7.
34. Association of a CB1 cannabinoid receptor gene (CNR1) polymorphism with severe alcohol dependence. Schmidt LG, etal., Drug Alcohol Depend. 2002 Feb 1;65(3):221-4.
35. Cannabinoid self-administration attenuates PCP-induced schizophrenia-like symptoms in adult rats. Spano MS, etal., Eur Neuropsychopharmacol. 2009 Oct 22.
36. New perspectives in the studies on endocannabinoid and cannabis: cannabinoid receptors and schizophrenia. Ujike H and Morita Y, J Pharmacol Sci. 2004 Dec;96(4):376-81.
37. Central cannabinoid 1 receptor antagonist administration prevents endotoxic hypotension affecting norepinephrine release in the preoptic anterior hypothalamic area. Villanueva A, etal., Shock. 2009 Dec;32(6):614-20.
38. Pretreatment with electroacupuncture induces rapid tolerance to focal cerebral ischemia through regulation of endocannabinoid system. Wang Q, etal., Stroke. 2009 Jun;40(6):2157-64. Epub 2009 Apr 16.
39. Discovery of 2-[5-(4-chloro-phenyl)-1-(2,4-dichloro-phenyl)-4-ethyl-1H-pyrazol-3-yl]-1, 5,5-trimethyl-1,5-dihydro-imidazol-4-thione (BPR-890) via an active metabolite. A novel, potent and selective cannabinoid-1 receptor inverse agonist with high antiobesity efficacy in DIO mice. Wu CH, etal., J Med Chem. 2009 Jul 23;52(14):4496-510.
40. Blockade of Cannabinoid CB1 receptor attenuates the acquisition of morphine-induced conditioned place preference along with a downregulation of ERK, CREB phosphorylation, and BDNF expression in the nucleus accumbens and hippocampus. Zhang J, etal., Neurosci Lett. 2016 Sep 6;630:70-76. doi: 10.1016/j.neulet.2016.07.047. Epub 2016 Jul 25.
Additional References at PubMed
PMID:7568154   PMID:8578601   PMID:8777318   PMID:8788864   PMID:8832654   PMID:8835542   PMID:8879486   PMID:8889548   PMID:9037253   PMID:9096127   PMID:9261404   PMID:10318961  
PMID:10318962   PMID:10349636   PMID:10499380   PMID:10570211   PMID:10612399   PMID:10619457   PMID:10712632   PMID:10854287   PMID:11042159   PMID:11069600   PMID:11076861   PMID:11080195  
PMID:11163634   PMID:11214319   PMID:11217851   PMID:11250865   PMID:11279117   PMID:11298451   PMID:11359870   PMID:11404425   PMID:11461969   PMID:11468287   PMID:11504797   PMID:11516401  
PMID:11564411   PMID:11727768   PMID:11734603   PMID:11779037   PMID:11823058   PMID:11823890   PMID:11880498   PMID:11890697   PMID:11905991   PMID:11976704   PMID:11982628   PMID:12019305  
PMID:12023519   PMID:12060781   PMID:12065702   PMID:12152079   PMID:12163181   PMID:12384171   PMID:12399252   PMID:12405999   PMID:12427832   PMID:12477932   PMID:12511587   PMID:12538878  
PMID:12542668   PMID:12562514   PMID:12568912   PMID:12578907   PMID:12657705   PMID:12663750   PMID:12670316   PMID:12770700   PMID:12897210   PMID:12917492   PMID:14517212   PMID:14526074  
PMID:14622229   PMID:14645706   PMID:14680762   PMID:14681479   PMID:14718593   PMID:14770190   PMID:15078543   PMID:15078564   PMID:15081793   PMID:15083252   PMID:15085199   PMID:15266010  
PMID:15294950   PMID:15305874   PMID:15326174   PMID:15378054   PMID:15383833   PMID:15466318   PMID:15489334   PMID:15525762   PMID:15525780   PMID:15606779   PMID:15619104   PMID:15664114  
PMID:15729296   PMID:15740726   PMID:15772347   PMID:15774549   PMID:15864349   PMID:15908955   PMID:15922076   PMID:15953683   PMID:16131814   PMID:16140402   PMID:16141072   PMID:16141073  
PMID:16143133   PMID:16169563   PMID:16221768   PMID:16256959   PMID:16262648   PMID:16301180   PMID:16360182   PMID:16452678   PMID:16501934   PMID:16527424   PMID:16537572   PMID:16540577  
PMID:16554472   PMID:16571781   PMID:16574988   PMID:16602821   PMID:16603318   PMID:16684513   PMID:16715087   PMID:16715483   PMID:16723519   PMID:16723537   PMID:16760363   PMID:16772520  
PMID:16793875   PMID:16847440   PMID:16855179   PMID:16864584   PMID:16908411   PMID:16928872   PMID:17065222   PMID:17194743   PMID:17208374   PMID:17210229   PMID:17383106   PMID:17395184  
PMID:17401376   PMID:17467187   PMID:17492633   PMID:17525344   PMID:17539482   PMID:17540007   PMID:17553427   PMID:17556369   PMID:17556587   PMID:17558404   PMID:17586723   PMID:17596442  
PMID:17618662   PMID:17653268   PMID:17656103   PMID:17704191   PMID:17884194   PMID:17884611   PMID:17927447   PMID:17931621   PMID:17944864   PMID:17944876   PMID:17950256   PMID:17976922  
PMID:18021759   PMID:18047561   PMID:18073275   PMID:18077674   PMID:18203691   PMID:18223666   PMID:18256173   PMID:18256258   PMID:18279310   PMID:18287559   PMID:18291559   PMID:18304750  
PMID:18316028   PMID:18323569   PMID:18335063   PMID:18336811   PMID:18367089   PMID:18373655   PMID:18438728   PMID:18477809   PMID:18483286   PMID:18487186   PMID:18493729   PMID:18509854  
PMID:18511494   PMID:18511694   PMID:18536748   PMID:18551116   PMID:18562289   PMID:18565508   PMID:18614700   PMID:18653287   PMID:18676872   PMID:18677409   PMID:18690112   PMID:18713976  
PMID:18719666   PMID:18752650   PMID:18791168   PMID:18794527   PMID:18814177   PMID:18818298   PMID:18833324   PMID:18973587   PMID:18987195   PMID:18987328   PMID:18992715   PMID:19033531  
PMID:19056257   PMID:19077175   PMID:19100800   PMID:19109485   PMID:19162082   PMID:19193902   PMID:19284549   PMID:19302195   PMID:19346272   PMID:19356696   PMID:19399401   PMID:19419794  
PMID:19421027   PMID:19452308   PMID:19453631   PMID:19462153   PMID:19494194   PMID:19524019   PMID:19538975   PMID:19554387   PMID:19563475   PMID:19596672   PMID:19607846   PMID:19614976  
PMID:19648913   PMID:19656492   PMID:19745722   PMID:19805329   PMID:19812302   PMID:19829291   PMID:19915567   PMID:19931229   PMID:19942623   PMID:19945395   PMID:20035014   PMID:20080779  
PMID:20081851   PMID:20083607   PMID:20092552   PMID:20096642   PMID:20110567   PMID:20111610   PMID:20124735   PMID:20138171   PMID:20139974   PMID:20164830   PMID:20168044   PMID:20190202  
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PMID:20664173   PMID:20664582   PMID:20719932   PMID:20724033   PMID:20810562   PMID:20816093   PMID:20837524   PMID:20939059   PMID:20958329   PMID:20962221   PMID:20967946   PMID:21050275  
PMID:21070814   PMID:21084685   PMID:21099327   PMID:21110319   PMID:21150911   PMID:21192920   PMID:21203567   PMID:21263035   PMID:21273433   PMID:21282604   PMID:21340622   PMID:21346174  
PMID:21373835   PMID:21383171   PMID:21389737   PMID:21406230   PMID:21419109   PMID:21445945   PMID:21473912   PMID:21514666   PMID:21540834   PMID:21554718   PMID:21625468   PMID:21645218  
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PMID:22618437   PMID:22623656   PMID:22639229   PMID:22656047   PMID:22693342   PMID:22722024   PMID:22723687   PMID:22734681   PMID:22778221   PMID:22787031   PMID:22787147   PMID:22826132  
PMID:22833670   PMID:22836266   PMID:22841573   PMID:22848724   PMID:22863674   PMID:22872212   PMID:22915616   PMID:22989885   PMID:23000076   PMID:23012412   PMID:23041513   PMID:23055515  
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PMID:23739343   PMID:23785142   PMID:23791919   PMID:23806960   PMID:23832510   PMID:23838176   PMID:23844009   PMID:23892554   PMID:23894352   PMID:23895426   PMID:23902406   PMID:23912944  
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PMID:24094141   PMID:24130809   PMID:24145131   PMID:24148808   PMID:24154525   PMID:24167249   PMID:24191036   PMID:24194600   PMID:24211273   PMID:24219803   PMID:24239560   PMID:24255040  
PMID:24319288   PMID:24327955   PMID:24336729   PMID:24365460   PMID:24381003   PMID:24440366   PMID:24469251   PMID:24485144   PMID:24509429   PMID:24520411   PMID:24586776   PMID:24607231  
PMID:24610119   PMID:24646401   PMID:24646614   PMID:24648181   PMID:24657416   PMID:24698342   PMID:24718372   PMID:24719095   PMID:24750433   PMID:24752144   PMID:24843137   PMID:24870806  
PMID:24907533   PMID:24927567   PMID:24944910   PMID:24950219   PMID:24952961   PMID:25002257   PMID:25018107   PMID:25030704   PMID:25033180   PMID:25037227   PMID:25051450   PMID:25066892  
PMID:25088915   PMID:25123336   PMID:25130621   PMID:25154875   PMID:25176168   PMID:25251035   PMID:25275313   PMID:25281429   PMID:25296982   PMID:25368177   PMID:25422468   PMID:25456065  
PMID:25474224   PMID:25487288   PMID:25535367   PMID:25543142   PMID:25545857   PMID:25573322   PMID:25595485   PMID:25609594   PMID:25692018   PMID:25698444   PMID:25707796   PMID:25740514  
PMID:25760323   PMID:25772509   PMID:25779032   PMID:25796567   PMID:25843798   PMID:25863168   PMID:25869131   PMID:25895455   PMID:25958042   PMID:26034207   PMID:26037800   PMID:26039099  
PMID:26061727   PMID:26075589   PMID:26082754   PMID:26092099   PMID:26092203   PMID:26158621   PMID:26273054   PMID:26348907   PMID:26388750   PMID:26412490   PMID:26426981   PMID:26427583  
PMID:26438875   PMID:26460022   PMID:26494286   PMID:26494785   PMID:26496209   PMID:26563389   PMID:26612422   PMID:26624499   PMID:26684509   PMID:26698395   PMID:26711911   PMID:26724516  
PMID:26730399   PMID:26890764   PMID:26898775   PMID:26900150   PMID:26907809   PMID:26984820   PMID:27001616   PMID:27012427   PMID:27056679   PMID:27109320   PMID:27163857   PMID:27179908  
PMID:27186643   PMID:27206660   PMID:27223629   PMID:27238866   PMID:27305347   PMID:27339436   PMID:27358460   PMID:27405468   PMID:27432473   PMID:27448020   PMID:27452464   PMID:27455076  
PMID:27485212   PMID:27501235   PMID:27528659   PMID:27543109   PMID:27577742   PMID:27589957   PMID:27596989   PMID:27626380   PMID:27658122   PMID:27737789   PMID:27764673   PMID:27826249  
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PMID:39300547  


Genomics

Comparative Map Data
Cnr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39433,923,171 - 33,948,831 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl433,924,593 - 33,948,831 (+)EnsemblGRCm39 Ensembl
GRCm38433,923,171 - 33,948,831 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl433,924,593 - 33,948,831 (+)EnsemblGRCm38mm10GRCm38
MGSCv37434,011,607 - 34,035,806 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36434,253,245 - 34,277,444 (+)NCBIMGSCv36mm8
Celera433,679,304 - 33,703,476 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map416.28NCBI
CNR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38688,139,864 - 88,167,349 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl688,139,864 - 88,166,347 (-)EnsemblGRCh38hg38GRCh38
GRCh37688,849,583 - 88,877,068 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36688,906,302 - 88,911,775 (-)NCBINCBI36Build 36hg18NCBI36
Build 34688,906,301 - 88,911,775NCBI
Celera689,267,475 - 89,293,659 (-)NCBICelera
Cytogenetic Map6q15NCBI
HuRef686,064,928 - 86,090,983 (-)NCBIHuRef
CHM1_1688,947,341 - 88,973,526 (-)NCBICHM1_1
T2T-CHM13v2.0689,348,358 - 89,375,841 (-)NCBIT2T-CHM13v2.0
Cnr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8553,204,867 - 53,230,396 (+)NCBIGRCr8
mRatBN7.2548,408,543 - 48,436,099 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl548,408,574 - 48,435,099 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx550,575,033 - 50,597,155 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0552,174,251 - 52,196,375 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0552,110,881 - 52,132,920 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0549,307,584 - 49,333,064 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl549,311,030 - 49,333,056 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0553,878,619 - 53,904,013 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4550,427,173 - 50,445,471 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1550,427,351 - 50,445,650 (+)NCBI
Celera547,168,709 - 47,190,724 (+)NCBICelera
Cytogenetic Map5q21NCBI
Cnr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541115,052,163 - 15,077,320 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541115,052,151 - 15,077,320 (-)NCBIChiLan1.0ChiLan1.0
CNR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25108,222,001 - 108,249,883 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16106,115,872 - 106,143,699 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0686,017,141 - 86,044,889 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1689,289,102 - 89,315,174 (-)NCBIpanpan1.1PanPan1.1panPan2
CNR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11247,537,240 - 47,560,723 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1247,509,583 - 47,560,983 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1247,344,588 - 47,368,064 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01248,342,012 - 48,365,459 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1248,346,226 - 48,363,768 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11247,639,694 - 47,663,171 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01247,561,070 - 47,584,546 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01247,752,753 - 47,776,234 (-)NCBIUU_Cfam_GSD_1.0
Cnr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494682,664,248 - 82,691,073 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365103,781,210 - 3,802,693 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365103,779,930 - 3,806,615 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl156,467,835 - 56,492,602 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1156,466,022 - 56,493,275 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2163,201,796 - 63,224,939 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CNR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11312,626,259 - 12,653,253 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1312,630,270 - 12,631,688 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040188,875,655 - 188,902,692 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cnr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247996,101,728 - 6,126,520 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247996,100,709 - 6,126,530 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cnr1
545 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2566
Count of miRNA genes:666
Interacting mature miRNAs:837
Transcripts:ENSMUST00000057188, ENSMUST00000084736, ENSMUST00000133462
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301203Alcp8_malcohol preference locus 8 (mouse)Not determined41739516051395290Mouse
1301586Stheal3_msoft tissue heal 3 (mouse)Not determined42865844262658566Mouse
10401115Pgia35_mproteoglycan induced arthritis 35 (mouse)Not determined41256237746562509Mouse
39128211Lwq22_mliver weight QTL 22 (mouse)41789261688982216Mouse
1558992Ses8_msalmonella enteritidis susceptibility 8 (mouse)Not determined4868324042683429Mouse
4141302Ssrq5_mstress response QTL 5 (mouse)Not determined868324042683430Mouse
4141555Nbwa2_mNZB and NZW autoimmunity 2 (mouse)Not determined41789251551892635Mouse
1300574Im2_mimmunoregulatory 2 (mouse)Not determined42807768262077816Mouse
12880405Jcdq1_mjoint cartilage degeneration QTL 1 (mouse)41256237746562509Mouse
4142318Lyr2_mlymphoma resistance 2 (mouse)Not determined1401045763283678Mouse
1301697Sluc18_msusceptibility to lung cancer 18 (mouse)Not determined42237344856373612Mouse
1357453Kidq4_mkidney weight QTL 4 (mouse)Not determined41789261688982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1357877Synch1_msynechia 1 (mouse)Not determined42870992562710107Mouse
25440481Moaq1_mmodifier of alien QTL 1 (mouse)41950000046000000Mouse
1301237Alcp7_malcohol preference locus 7 (mouse)Not determined41739516051395290Mouse
4141911W6q15_mweight 6 weeks QTL 15 (mouse)Not determined1789261688982216Mouse
1302075Bdln6_mbody length 6 (mouse)Not determined42237344856373612Mouse
1302010Wta1_mweight adult 1 (mouse)Not determined4868324042683429Mouse
1301437Scon1_msucrose consumption 1 (mouse)Not determined42237344856373612Mouse
10401905Sicd3_mseizure-induced cell death 3 (mouse)Not determined4939552543760862Mouse
1301473Triglq1_mtriglyceride QTL 1 (mouse)Not determined4868324042683429Mouse
1300769Pcyts2_mplasmacytoma susceptibility 2 (mouse)Not determined42211194456112145Mouse
1301990Arvm1_mautoimmune renal vasculitis 1 (mouse)Not determined42933264663332776Mouse
1302058Hrtfm3_mheart failure modifier 3 (mouse)Not determined42211194456112145Mouse
1302184Aaom1_mautoimmune aoritis in MRL mice 1 (mouse)Not determined42432229946332776Mouse
1302125Lxw1_mlupus BXSB x NZW 1 (mouse)Not determined4868324042683429Mouse

Markers in Region
PMC123076P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38433,944,286 - 33,944,742UniSTSGRCm38
MGSCv37434,031,261 - 34,031,717UniSTSGRCm37
Celera433,698,930 - 33,699,386UniSTS
Cytogenetic Map4A5UniSTS
cM Map413.9UniSTS
PMC166293P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38433,944,651 - 33,945,114UniSTSGRCm38
MGSCv37434,031,626 - 34,032,089UniSTSGRCm37
Celera433,699,295 - 33,699,758UniSTS
Cytogenetic Map4A5UniSTS
cM Map413.9UniSTS
PMC193595P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38433,944,687 - 33,944,886UniSTSGRCm38
MGSCv37434,031,662 - 34,031,861UniSTSGRCm37
Celera433,699,331 - 33,699,530UniSTS
Cytogenetic Map4A5UniSTS
cM Map413.9UniSTS
Cnr1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38433,944,814 - 33,944,996UniSTSGRCm38
MGSCv37434,031,789 - 34,031,971UniSTSGRCm37
Celera433,699,458 - 33,699,640UniSTS
Cytogenetic Map4A5UniSTS
cM Map413.9UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001365881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006537595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF153345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY011579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY522554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY522555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX005292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA327850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB244710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD351242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD351932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF745382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF745642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MH013961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MH013962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U17985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U22948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U40709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y18374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000057188   ⟹   ENSMUSP00000055797
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl433,924,632 - 33,948,831 (+)Ensembl
GRCm38.p6 Ensembl433,924,632 - 33,948,831 (+)Ensembl
Ensembl Acc Id: ENSMUST00000084736   ⟹   ENSMUSP00000081787
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl433,926,202 - 33,948,819 (+)Ensembl
GRCm38.p6 Ensembl433,926,202 - 33,948,819 (+)Ensembl
Ensembl Acc Id: ENSMUST00000133462
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl433,924,593 - 33,935,316 (+)Ensembl
GRCm38.p6 Ensembl433,924,593 - 33,935,316 (+)Ensembl
RefSeq Acc Id: NM_001355020   ⟹   NP_001341949
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,264 - 33,948,831 (+)NCBI
GRCm38433,924,264 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001355021   ⟹   NP_001341950
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,644 - 33,948,831 (+)NCBI
GRCm38433,924,644 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001365881   ⟹   NP_001352810
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,926,380 - 33,948,831 (+)NCBI
GRCm38433,926,380 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: NM_007726   ⟹   NP_031752
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,644 - 33,948,831 (+)NCBI
GRCm38433,924,644 - 33,948,831 (+)NCBI
MGSCv37434,011,607 - 34,035,806 (+)RGD
Celera433,679,304 - 33,703,476 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006537591   ⟹   XP_006537654
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,937,452 - 33,948,831 (+)NCBI
GRCm38433,935,212 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537592   ⟹   XP_006537655
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,402 - 33,948,831 (+)NCBI
GRCm38433,924,400 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537593   ⟹   XP_006537656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,939,033 - 33,948,831 (+)NCBI
GRCm38433,939,033 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537594   ⟹   XP_006537657
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,923,522 - 33,948,831 (+)NCBI
GRCm38433,923,797 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006537595   ⟹   XP_006537658
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,035 - 33,948,831 (+)NCBI
GRCm38433,924,040 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030253149   ⟹   XP_030109009
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,923,171 - 33,948,831 (+)NCBI
GRCm38433,923,171 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163625   ⟹   XP_036019518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,402 - 33,948,831 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163626   ⟹   XP_036019519
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39433,924,402 - 33,948,831 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001341949 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341950 (Get FASTA)   NCBI Sequence Viewer  
  NP_001352810 (Get FASTA)   NCBI Sequence Viewer  
  NP_031752 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537654 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537655 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537656 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537657 (Get FASTA)   NCBI Sequence Viewer  
  XP_006537658 (Get FASTA)   NCBI Sequence Viewer  
  XP_030109009 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019518 (Get FASTA)   NCBI Sequence Viewer  
  XP_036019519 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA57202 (Get FASTA)   NCBI Sequence Viewer  
  AAA64413 (Get FASTA)   NCBI Sequence Viewer  
  AAA91176 (Get FASTA)   NCBI Sequence Viewer  
  AAD34624 (Get FASTA)   NCBI Sequence Viewer  
  AAG37743 (Get FASTA)   NCBI Sequence Viewer  
  AAH70447 (Get FASTA)   NCBI Sequence Viewer  
  AAH79564 (Get FASTA)   NCBI Sequence Viewer  
  AAS91800 (Get FASTA)   NCBI Sequence Viewer  
  AAS91801 (Get FASTA)   NCBI Sequence Viewer  
  AXZ96961 (Get FASTA)   NCBI Sequence Viewer  
  AXZ96962 (Get FASTA)   NCBI Sequence Viewer  
  BAE24003 (Get FASTA)   NCBI Sequence Viewer  
  CAB42647 (Get FASTA)   NCBI Sequence Viewer  
  EDL05482 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000055797
  ENSMUSP00000055797.7
  ENSMUSP00000081787
  ENSMUSP00000081787.3
GenBank Protein P47746 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_031752   ⟸   NM_007726
- UniProtKB: Q5SF33 (UniProtKB/Swiss-Prot),   P47746 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537657   ⟸   XM_006537594
- Peptide Label: isoform X1
- UniProtKB: Q5SF33 (UniProtKB/Swiss-Prot),   P47746 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537658   ⟸   XM_006537595
- Peptide Label: isoform X1
- UniProtKB: Q5SF33 (UniProtKB/Swiss-Prot),   P47746 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537655   ⟸   XM_006537592
- Peptide Label: isoform X1
- UniProtKB: Q5SF33 (UniProtKB/Swiss-Prot),   P47746 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537654   ⟸   XM_006537591
- Peptide Label: isoform X1
- UniProtKB: Q5SF33 (UniProtKB/Swiss-Prot),   P47746 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006537656   ⟸   XM_006537593
- Peptide Label: isoform X1
- UniProtKB: Q5SF33 (UniProtKB/Swiss-Prot),   P47746 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030109009   ⟸   XM_030253149
- Peptide Label: isoform X1
- UniProtKB: P47746 (UniProtKB/Swiss-Prot),   Q5SF33 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001341949   ⟸   NM_001355020
- UniProtKB: P47746 (UniProtKB/Swiss-Prot),   Q5SF33 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001341950   ⟸   NM_001355021
- UniProtKB: P47746 (UniProtKB/Swiss-Prot),   Q5SF33 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001352810   ⟸   NM_001365881
- UniProtKB: P47746 (UniProtKB/Swiss-Prot),   Q5SF33 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000081787   ⟸   ENSMUST00000084736
Ensembl Acc Id: ENSMUSP00000055797   ⟸   ENSMUST00000057188
RefSeq Acc Id: XP_036019518   ⟸   XM_036163625
- Peptide Label: isoform X1
- UniProtKB: P47746 (UniProtKB/Swiss-Prot),   Q5SF33 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036019519   ⟸   XM_036163626
- Peptide Label: isoform X1
- UniProtKB: P47746 (UniProtKB/Swiss-Prot),   Q5SF33 (UniProtKB/Swiss-Prot),   A0A385KNU8 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P47746-F1-model_v2 AlphaFold P47746 1-473 view protein structure

Promoters
RGD ID:6882994
Promoter ID:EPDNEW_M4948
Type:single initiation site
Name:Cnr1_1
Description:Mus musculus cannabinoid receptor 1 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38433,924,644 - 33,924,704EPDNEW
RGD ID:6835071
Promoter ID:MM_KWN:37017
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Kidney,   Lung
Transcripts:NM_007726,   OTTMUST00000018901
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36434,011,381 - 34,011,881 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104615 AgrOrtholog
Ensembl Genes ENSMUSG00000044288 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000057188 ENTREZGENE
  ENSMUST00000057188.7 UniProtKB/Swiss-Prot
  ENSMUST00000084736 ENTREZGENE
  ENSMUST00000084736.3 UniProtKB/Swiss-Prot
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Canbinoid_rcpt_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cnbnoid_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12801 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:104615 ENTREZGENE
NCBI Gene 12801 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR22750:SF47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cnr1 PhenoGen
PIRSF Cnoid_rcpt_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS CANABINOID1R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CANNABINOIDR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A385KNU8 ENTREZGENE, UniProtKB/TrEMBL
  CNR1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q5SF33 ENTREZGENE
  Q99NU3_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q5SF33 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-06-27 Cnr1  cannabinoid receptor 1  Cnr1  cannabinoid receptor 1 (brain)  Symbol and/or name change 5135510 APPROVED