Abl2 (ABL proto-oncogene 2, non-receptor tyrosine kinase) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Abl2 (ABL proto-oncogene 2, non-receptor tyrosine kinase) Mus musculus
Analyze
Symbol: Abl2
Name: ABL proto-oncogene 2, non-receptor tyrosine kinase
RGD ID: 10053
MGI Page MGI
Description: Enables magnesium ion binding activity; manganese ion binding activity; and protein tyrosine kinase activity. Involved in several processes, including positive regulation of T cell migration; positive regulation of establishment of T cell polarity; and synapse maturation. Acts upstream of or within several processes, including T cell differentiation; nervous system development; and regulation of signal transduction. Located in several cellular components, including dendritic spine; lamellipodium; and phagocytic cup. Is active in glutamatergic synapse and postsynapse. Is expressed in several structures, including brain; diaphragm; hemolymphoid system gland; hindlimb long bone; and seminiferous cord. Orthologous to human ABL2 (ABL proto-oncogene 2, non-receptor tyrosine kinase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A; AA536808; abelson murine leukemia viral oncogene homolog 2; Abelson tyrosine-protein kinase 2; Abelson-related gene protein; Abll; Arg; MGC169395; tyrosine kinase ARG; tyrosine-protein kinase ABL2; tyrosine-protein kinase ARG; v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene); v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391156,386,160 - 156,477,189 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1156,386,356 - 156,477,138 (+)EnsemblGRCm39 Ensembl
GRCm381156,558,590 - 156,649,619 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1156,558,786 - 156,649,568 (+)EnsemblGRCm38mm10GRCm38
MGSCv371158,488,918 - 158,579,750 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361158,395,726 - 158,479,393 (+)NCBIMGSCv36mm8
Celera1158,949,003 - 159,040,041 (+)NCBICelera
Cytogenetic Map1G3NCBI
cM Map167.71NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-hydroxypropanoic acid  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (EXP)
acrolein  (ISO)
aflatoxin B1  (EXP,ISO)
alpha-pinene  (ISO)
aristolochic acid A  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
boron nitride  (ISO)
butanal  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
cadmium sulfate  (ISO)
caffeine  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
Dibutyl phosphate  (ISO)
diclofenac  (ISO)
dopamine  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
fenoldopam  (ISO)
fluoranthene  (EXP)
FR900359  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (EXP)
indometacin  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (EXP)
methapyrilene  (ISO)
methylisothiazolinone  (ISO)
N,N-diethyl-m-toluamide  (ISO)
nickel atom  (ISO)
ozone  (EXP,ISO)
paracetamol  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
permethrin  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
ponatinib  (ISO)
potassium chromate  (ISO)
potassium dichromate  (EXP)
rac-lactic acid  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP,ISO)
sodium arsenite  (ISO)
taurine  (ISO)
testosterone  (ISO)
theophylline  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
triphenyl phosphate  (ISO)
tungsten  (EXP)
valproic acid  (ISO)
xylitol  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
actin cytoskeleton organization  (IDA,IGI)
actin filament bundle assembly  (IDA)
actin filament organization  (IDA)
adult walking behavior  (IMP)
aggressive behavior  (IMP)
alpha-beta T cell differentiation  (IGI)
auditory behavior  (IMP)
Bergmann glial cell differentiation  (IGI)
canonical NF-kappaB signal transduction  (IGI)
cell-cell adhesion  (IGI)
cellular response to oxidative stress  (ISO)
cellular response to retinoic acid  (ISO)
cerebellum morphogenesis  (IGI)
circulatory system development  (IGI)
dendrite morphogenesis  (IGI,IMP)
dendritic spine maintenance  (IGI,IMP)
DN4 thymocyte differentiation  (IGI)
epidermal growth factor receptor signaling pathway  (IBA,IGI)
establishment of localization in cell  (IGI,IMP)
exploration behavior  (IGI)
learning  (IMP)
multicellular organism growth  (IMP)
negative regulation of cell-cell adhesion  (IGI)
negative regulation of endothelial cell apoptotic process  (IGI)
negative regulation of Rho protein signal transduction  (IGI)
neural tube closure  (IGI)
neuroepithelial cell differentiation  (IGI)
neuromuscular process controlling balance  (IGI,IMP)
neuron differentiation  (IGI)
neuron remodeling  (IMP)
peptidyl-tyrosine phosphorylation  (IDA,ISO)
phagocytosis  (IGI,IMP)
phospholipase C-activating G protein-coupled receptor signaling pathway  (ISO)
platelet-derived growth factor receptor signaling pathway  (IGI)
positive regulation of canonical NF-kappaB signal transduction  (IGI)
positive regulation of cytosolic calcium ion concentration  (ISO)
positive regulation of ERK1 and ERK2 cascade  (IGI)
positive regulation of establishment of T cell polarity  (IMP)
positive regulation of interleukin-2 production  (IGI)
positive regulation of neuron projection development  (IGI,ISO)
positive regulation of oxidoreductase activity  (ISO)
positive regulation of T cell migration  (IMP)
positive regulation of type II interferon production  (IGI)
positive regulation of Wnt signaling pathway, planar cell polarity pathway  (IGI)
post-embryonic development  (IGI)
protein localization  (IMP)
protein phosphorylation  (IDA)
regulation of extracellular matrix organization  (IGI)
Rho protein signal transduction  (IGI)
substrate-dependent cell migration, cell extension  (IGI)
synapse maturation  (IDA,IMP)
visual learning  (IGI)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal actin cytoskeleton morphology  (IAGP)
abnormal brain morphology  (IAGP)
abnormal cerebellar layer morphology  (IAGP)
abnormal cerebellar lobule formation  (IAGP)
abnormal cerebellum fissure morphology  (IAGP)
abnormal cerebellum morphology  (IAGP)
abnormal cerebellum white matter morphology  (IAGP)
abnormal cerebral cortex pyramidal cell morphology  (IAGP)
abnormal embryonic neuroepithelium morphology  (IAGP)
abnormal motor coordination/balance  (IAGP)
abnormal neuron differentiation  (IAGP)
abnormal peritoneum morphology  (IAGP)
absent cerebellar lobules  (IAGP)
absent cerebellum fissure  (IAGP)
absent startle reflex  (IAGP)
decreased aggression  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased cerebellar granule cell precursor proliferation  (IAGP)
decreased startle reflex  (IAGP)
delayed neural tube closure  (IAGP)
distended pericardium  (IAGP)
ectopic Bergmann glia cells  (IAGP)
ectopic cerebellar granule cells  (IAGP)
ectopic Purkinje cell  (IAGP)
edema  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
hemopericardium  (IAGP)
hemoperitoneum  (IAGP)
impaired coordination  (IAGP)
increased embryonic tissue cell apoptosis  (IAGP)
lethality throughout fetal growth and development, incomplete penetrance  (IAGP)
novel environmental response-related retropulsion  (IAGP)
pericardial edema  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
reduced cerebellar foliation  (IAGP)
reduced fertility  (IAGP)
small cerebellum  (IAGP)
transmission ratio distortion  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Rat pineal gland phosducin: cDNA isolation, nucleotide sequence, and chromosomal assignment in the mouse. Craft CM, etal., Genomics 1991 Jun;10(2):400-9.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Assignment of 22 loci in the rat by somatic hybrid and linkage analysis. Yeung RS, etal., Mamm Genome 1993;4(10):585-8.
Additional References at PubMed
PMID:1648219   PMID:2564419   PMID:2567701   PMID:2574151   PMID:2787796   PMID:3787260   PMID:7590237   PMID:8650181   PMID:8700546   PMID:8875975   PMID:8889548   PMID:9107685  
PMID:9373244   PMID:9825957   PMID:9883720   PMID:10349636   PMID:10725249   PMID:10922068   PMID:10995551   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11279004   PMID:11752434  
PMID:12477932   PMID:12520002   PMID:12569093   PMID:12626632   PMID:12748290   PMID:12777400   PMID:12893824   PMID:12904583   PMID:12950161   PMID:14610273   PMID:14993293   PMID:15084284  
PMID:15138293   PMID:15254900   PMID:15987940   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16778019   PMID:16971514   PMID:17114649   PMID:17160016   PMID:17652459   PMID:17686996  
PMID:17928439   PMID:17967808   PMID:18025176   PMID:18346204   PMID:18799693   PMID:18827006   PMID:19414610   PMID:19563810   PMID:19805386   PMID:20022248   PMID:20146487   PMID:20181697  
PMID:20417104   PMID:20837657   PMID:20980600   PMID:21267068   PMID:21873635   PMID:22357865   PMID:22396406   PMID:22665498   PMID:22738912   PMID:22810897   PMID:22849492   PMID:23100514  
PMID:23365224   PMID:23595732   PMID:23840065   PMID:24357321   PMID:24367707   PMID:25111230   PMID:25691660   PMID:27335408   PMID:27358479   PMID:28086240   PMID:28706196   PMID:29231808  
PMID:29269609   PMID:29550892   PMID:29799838   PMID:29988075   PMID:31699690   PMID:31914386   PMID:32325033   PMID:33087469   PMID:33770321   PMID:35874829   PMID:37345264   PMID:37357611  
PMID:37479901   PMID:38187761   PMID:38697301  


Genomics

Comparative Map Data
Abl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391156,386,160 - 156,477,189 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1156,386,356 - 156,477,138 (+)EnsemblGRCm39 Ensembl
GRCm381156,558,590 - 156,649,619 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1156,558,786 - 156,649,568 (+)EnsemblGRCm38mm10GRCm38
MGSCv371158,488,918 - 158,579,750 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361158,395,726 - 158,479,393 (+)NCBIMGSCv36mm8
Celera1158,949,003 - 159,040,041 (+)NCBICelera
Cytogenetic Map1G3NCBI
cM Map167.71NCBI
ABL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381179,099,330 - 179,229,677 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1179,099,330 - 179,229,684 (-)EnsemblGRCh38hg38GRCh38
GRCh371179,068,465 - 179,198,812 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361177,335,085 - 177,465,390 (-)NCBINCBI36Build 36hg18NCBI36
Build 341175,808,413 - 175,930,393NCBI
Celera1152,177,312 - 152,307,714 (-)NCBICelera
Cytogenetic Map1q25.2NCBI
HuRef1150,296,029 - 150,426,165 (-)NCBIHuRef
CHM1_11180,492,111 - 180,622,356 (-)NCBICHM1_1
T2T-CHM13v2.01178,454,335 - 178,584,699 (-)NCBIT2T-CHM13v2.0
Abl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81371,223,902 - 71,319,770 (+)NCBIGRCr8
mRatBN7.21368,673,702 - 68,770,846 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1368,673,722 - 68,839,742 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1371,260,527 - 71,356,363 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01372,580,546 - 72,675,673 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01369,842,041 - 69,937,159 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01374,154,533 - 74,333,244 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1374,154,835 - 74,333,244 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01379,074,821 - 79,253,783 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41371,546,918 - 71,915,301 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1368,537,724 - 68,702,946 (+)NCBICelera
Cytogenetic Map13q22NCBI
Abl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540618,437,672 - 18,527,698 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540618,435,984 - 18,527,967 (-)NCBIChiLan1.0ChiLan1.0
ABL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2170,530,839 - 70,660,797 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1170,195,232 - 70,322,490 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01154,586,423 - 154,711,621 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11158,275,334 - 158,313,954 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1158,280,994 - 158,313,915 (-)Ensemblpanpan1.1panPan2
ABL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1720,696,659 - 20,735,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl720,700,144 - 20,727,410 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha720,144,587 - 20,259,861 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0720,356,575 - 20,471,864 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl720,356,795 - 20,463,911 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1720,263,283 - 20,379,080 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0720,371,214 - 20,487,250 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0720,506,417 - 20,622,140 (+)NCBIUU_Cfam_GSD_1.0
Abl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934491,923,100 - 92,008,043 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364819,824,392 - 9,847,104 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364819,823,790 - 9,847,291 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9120,892,952 - 120,984,695 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19120,888,891 - 120,984,724 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29132,663,636 - 132,782,743 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12550,106,621 - 50,244,002 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2550,216,483 - 50,241,621 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605551,607,771 - 51,778,370 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Abl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247713,160,224 - 3,278,787 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247713,160,528 - 3,280,860 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Abl2
4951 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:2871
Count of miRNA genes:898
Interacting mature miRNAs:1268
Transcripts:ENSMUST00000027888, ENSMUST00000166172, ENSMUST00000173929
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141095010175095156Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
14746980Manh50_mmandible shape 50 (mouse)1134131564168131564Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142489543176489734Mouse
14700780Syncq3_msynovial calcification QTL 3 (mouse)1155424746156585570Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141233173175233272Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
1300611Tlln_mtail length (mouse)Not determined1155837814159390372Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1155831765189831892Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139602037173602216Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147125258182873798Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
1301135Pas8_mpulmonary adenoma susceptibility 8 (mouse)Not determined1147125258158233272Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150756737184756922Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150193673188359312Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152132744186132744Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139602037173602216Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154410512188410512Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150193673188359312Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152038741186038913Mouse
1301818Ap1q_malcohol preference 1 QTL (mouse)Not determined1146908199167586222Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155002940189002940Mouse
4141075Bmd1a_mbone mineral density 1a (mouse)Not determined1155837814162145325Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122027729164827569Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152038741186038913Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1135877901169878015Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153675990187676105Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155002940189002940Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139602037173602216Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150193673188359312Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155002940189002940Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9147875502181875616Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155716221189716369Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139602037173602216Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135794822169795012Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153712853187712853Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141233173175233272Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144531347178531592Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139602037173602216Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152038741186038913Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined155831765189831892Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141233173175233272Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145145207179145325Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152038741186038913Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139452188173452308Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143284665177284803Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155582237185994196Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1122927738156927738Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1155831765189831892Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139602037173602216Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155716221189716369Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147125258188983224Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1147875502181875616Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131156308165139464Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144449142178449142Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155525623189527533Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155716221189716369Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152794822186438620Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1155831765189831892Mouse
1357567Nidd3k_mNidd3 on KK-A<y> (mouse)Not determined7147125258169038913Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136209950170210094Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined151835111185835280Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141233173175233272Mouse
12903996Cfq5_mconditioned fear QTL 5 (mouse)1150606337159307464Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155721528189722608Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151186243185186402Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153557406175468938Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129130858163130993Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152038741186038913Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147125258171632257Mouse

Markers in Region
D1Mit425  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381156,624,618 - 156,624,738UniSTSGRCm38
MGSCv371158,554,749 - 158,554,869UniSTSGRCm37
Celera1159,015,021 - 159,015,171UniSTS
Cytogenetic Map1G3-H1UniSTS
cM Map181.6UniSTS
Whitehead Genetic182.0UniSTS
Whitehead/MRC_RH12040.1UniSTS
Whitehead_YAC1 UniSTS
RH124499  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381156,646,816 - 156,646,949UniSTSGRCm38
MGSCv371158,576,947 - 158,577,080UniSTSGRCm37
Celera1159,037,227 - 159,037,360UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map1H1UniSTS
UniSTS:234240  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381156,645,117 - 156,645,316UniSTSGRCm38
MGSCv371158,575,248 - 158,575,447UniSTSGRCm37
Celera1159,035,535 - 159,035,733UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map1H1UniSTS
AA925877  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381156,649,268 - 156,649,371UniSTSGRCm38
MGSCv371158,579,399 - 158,579,502UniSTSGRCm37
Celera1159,039,690 - 159,039,793UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map1H1UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS
BB283609  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381156,564,232 - 156,564,335UniSTSGRCm38
MGSCv371158,494,363 - 158,494,466UniSTSGRCm37
Celera1158,954,347 - 158,954,450UniSTS
Cytogenetic Map1G3-H1UniSTS
Whitehead/MRC_RH12021.68UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001136104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011238737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011238738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC145078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF339052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC137771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ171655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ084361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ707706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U40827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000027888   ⟹   ENSMUSP00000027888
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1156,386,619 - 156,470,286 (+)Ensembl
GRCm38.p6 Ensembl1156,559,049 - 156,642,716 (+)Ensembl
Ensembl Acc Id: ENSMUST00000166172   ⟹   ENSMUSP00000126181
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1156,386,557 - 156,477,138 (+)Ensembl
GRCm38.p6 Ensembl1156,558,987 - 156,649,568 (+)Ensembl
Ensembl Acc Id: ENSMUST00000173929   ⟹   ENSMUSP00000133381
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1156,386,356 - 156,452,946 (+)Ensembl
GRCm38.p6 Ensembl1156,558,786 - 156,625,376 (+)Ensembl
Ensembl Acc Id: ENSMUST00000190749   ⟹   ENSMUSP00000140125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1156,443,387 - 156,457,563 (+)Ensembl
GRCm38.p6 Ensembl1156,615,923 - 156,629,993 (+)Ensembl
RefSeq Acc Id: NM_001136104   ⟹   NP_001129576
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,357 - 156,477,189 (+)NCBI
GRCm381156,558,787 - 156,649,619 (+)NCBI
MGSCv371158,488,918 - 158,579,750 (+)RGD
Celera1158,949,003 - 159,040,041 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009595   ⟹   NP_033725
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,357 - 156,477,189 (+)NCBI
GRCm381156,558,787 - 156,649,619 (+)NCBI
MGSCv371158,488,918 - 158,579,750 (+)RGD
Celera1158,949,003 - 159,040,041 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006496613   ⟹   XP_006496676
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,441,415 - 156,477,138 (+)NCBI
GRCm381156,613,837 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496614   ⟹   XP_006496677
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,441,415 - 156,477,138 (+)NCBI
GRCm381156,613,837 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496615   ⟹   XP_006496678
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,160 - 156,477,138 (+)NCBI
GRCm381156,558,590 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496616   ⟹   XP_006496679
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,160 - 156,477,138 (+)NCBI
GRCm381156,558,590 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496617   ⟹   XP_006496680
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,441,415 - 156,477,138 (+)NCBI
GRCm381156,613,837 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496620   ⟹   XP_006496683
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,441,416 - 156,477,138 (+)NCBI
GRCm381156,613,838 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496621   ⟹   XP_006496684
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,160 - 156,477,138 (+)NCBI
GRCm381156,558,590 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496622   ⟹   XP_006496685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,441,416 - 156,477,138 (+)NCBI
GRCm381156,613,839 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011238737   ⟹   XP_011237039
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,160 - 156,477,138 (+)NCBI
GRCm381156,558,590 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011238738   ⟹   XP_011237040
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391156,386,160 - 156,477,138 (+)NCBI
GRCm381156,558,590 - 156,649,568 (+)NCBI
Sequence:
RefSeq Acc Id: NP_033725   ⟸   NM_009595
- Peptide Label: isoform b
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot),   F8VQH0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001129576   ⟸   NM_001136104
- Peptide Label: isoform a
- UniProtKB: B2RQ57 (UniProtKB/TrEMBL),   B7ZMZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496678   ⟸   XM_006496615
- Peptide Label: isoform X4
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496679   ⟸   XM_006496616
- Peptide Label: isoform X5
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496684   ⟸   XM_006496621
- Peptide Label: isoform X9
- UniProtKB: B7ZMZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496676   ⟸   XM_006496613
- Peptide Label: isoform X2
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496677   ⟸   XM_006496614
- Peptide Label: isoform X3
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496680   ⟸   XM_006496617
- Peptide Label: isoform X6
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006496683   ⟸   XM_006496620
- Peptide Label: isoform X8
- UniProtKB: B7ZMZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496685   ⟸   XM_006496622
- Peptide Label: isoform X10
- UniProtKB: B7ZMZ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011237039   ⟸   XM_011238737
- Peptide Label: isoform X1
- UniProtKB: Q4JIM5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011237040   ⟸   XM_011238738
- Peptide Label: isoform X7
- UniProtKB: B7ZMZ2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000027888   ⟸   ENSMUST00000027888
Ensembl Acc Id: ENSMUSP00000126181   ⟸   ENSMUST00000166172
Ensembl Acc Id: ENSMUSP00000140125   ⟸   ENSMUST00000190749
Ensembl Acc Id: ENSMUSP00000133381   ⟸   ENSMUST00000173929
Protein Domains
Protein kinase   SH2   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4JIM5-F1-model_v2 AlphaFold Q4JIM5 1-1182 view protein structure

Promoters
RGD ID:6875354
Promoter ID:EPDNEW_M1128
Type:multiple initiation site
Name:Abl2_1
Description:Mus musculus v-abl Abelson murine leukemia viral oncogene 2 (arg,Abelson-related gene) , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381156,558,795 - 156,558,855EPDNEW
RGD ID:6817173
Promoter ID:MM_KWN:2534
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001136104,   NM_009595
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361158,488,616 - 158,489,116 (+)MPROMDB
RGD ID:6846575
Promoter ID:MM_ACW:2848
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ABL2.BSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361158,545,724 - 158,546,224 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:87860 AgrOrtholog
Ensembl Genes ENSMUSG00000026596 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027888 ENTREZGENE
  ENSMUST00000027888.13 UniProtKB/TrEMBL
  ENSMUST00000166172 ENTREZGENE
  ENSMUST00000166172.9 UniProtKB/TrEMBL
  ENSMUST00000173929.8 UniProtKB/TrEMBL
  ENSMUST00000190749.3 UniProtKB/TrEMBL
Gene3D-CATH 3.30.505.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotidyltransferases domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ABL_SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  F-actin-binding UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  Grb2-like UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Non-receptor_tyrosine_kinases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11352 UniProtKB/TrEMBL
MGD MGI:87860 ENTREZGENE
NCBI Gene 11352 ENTREZGENE
PANTHER PROTEIN ENHANCER OF SEVENLESS 2B UniProtKB/TrEMBL
  TYROSINE-PROTEIN KINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam F_actin_bind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase_Tyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abl2 PhenoGen
PRINTS SH2DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3DOMAIN UniProtKB/TrEMBL
  TYRKINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FABD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TyrKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55550 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WQB7_MOUSE UniProtKB/TrEMBL
  ABL2_MOUSE UniProtKB/Swiss-Prot
  B2RQ57 ENTREZGENE, UniProtKB/TrEMBL
  B7ZMZ2 ENTREZGENE, UniProtKB/TrEMBL
  F8VQH0 ENTREZGENE, UniProtKB/TrEMBL
  G3UWQ2_MOUSE UniProtKB/TrEMBL
  Q4JIM5 ENTREZGENE
  Q61055_MOUSE UniProtKB/TrEMBL
  Q99P28_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-04 Abl2  ABL proto-oncogene 2, non-receptor tyrosine kinase  Abl2  v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)  Symbol and/or name change 5135510 APPROVED
2012-07-10 Abl2  v-abl Abelson murine leukemia viral oncogene 2 (arg, Abelson-related gene)  Abl2  v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene)  Symbol and/or name change 5135510 APPROVED