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GENE - TERM ANNOTATION REPORT

8 Annotations Found.

An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from mutant phenotype (IMP)
  •  
  • The annotation was made from Bandyopadhyay U, etal., Mol Cell Biol. 2008 Sep;28(18):5747-63. doi: 10.1128/MCB.02070-07. Epub 2008 Jul 21.
  • 22 additional annotations were made from Bandyopadhyay U, etal., Mol Cell Biol. 2008 Sep;28(18):5747-63. doi: 10.1128/MCB.02070-07. Epub 2008 Jul 21.
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: PMID:18644871


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB:P13473 & ensembl:ENSP00000200639
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000107
  • Original References(s): GO_REF:0000107


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from genetic interaction (IGI)
  •  
  • The annotation was made from Bandyopadhyay U, etal., Mol Cell Biol. 2008 Sep;28(18):5747-63. doi: 10.1128/MCB.02070-07. Epub 2008 Jul 21.
  • The annotation has been inferred from genetic interaction with UniProtKB:P63018
  • 22 additional annotations were made from Bandyopadhyay U, etal., Mol Cell Biol. 2008 Sep;28(18):5747-63. doi: 10.1128/MCB.02070-07. Epub 2008 Jul 21.
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: acts_upstream_of_or_within
  • Curation Notes: PMID:18644871


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with LAMP2 (Homo sapiens)
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: involved_in
  • Curation Notes: (PMID:27628032)
  • Original References(s): PMID:27628032


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:P17047
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000024
  • Original References(s): GO_REF:0000024


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB:P17047 & ensembl:ENSMUSP00000074448
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000107
  • Original References(s): GO_REF:0000107


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
  •  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Lamp2 (Mus musculus)
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: involved_in
  • Curation Notes: (PMID:27628032)
  • Original References(s): PMID:27628032


  • An association has been curated linking Lamp2 and protein targeting to lysosome involved in chaperone-mediated autophagy in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
  •  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with MGI:96748 & PANTHER:PTN002608933 & Lamp2 (Rattus norvegicus) & UniProtKB:P13473
  • 3 RGD objects have been annotated to protein targeting to lysosome involved in chaperone-mediated autophagy  (GO:0061740)
  • 32 papers in RGD have been used to annotate Lamp2
  • Qualifier: involved_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


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